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The map label for this gene is HipB

Identifier: 20808446

GI number: 20808446

Start: 1985904

End: 1986287

Strand: Reverse

Name: HipB

Synonym: TTE2046

Alternate gene names: NA

Gene position: 1986287-1985904 (Counterclockwise)

Preceding gene: 20808447

Following gene: 20808445

Centisome position: 73.85

GC content: 36.46

Gene sequence:

>384_bases
ATGAAGGAAGAAGTGTACAGGGAAATAGGCAGGCGGTTGTGGGAATTACGCAGACAGAGAGGTTTTACTCGAGAACAGGC
TGCAAGGTATCTGGGAATCAGTCAAAAGCAGCTCGCACGTTATGAAAAAGGCAGAGAAAAAATCAGTACGGACGTTTTAG
AACGACTGGCCGGATTATATGGTTGTGATTATAAGTATTTGCTGGATGATAATGAAAGTTCAAGTGAACAGATTGCAGTA
AACTTTGGAACATATAAAATCTCTGATGAGGATTTAGAAGTTATTGCATTTGCCAATCAATTTGTCATGAATTTAAATAC
AATGTATAACATGGATGAAGAGCTTAAAATGAACCACAATTTAACAAATATATCAAGCATTTAA

Upstream 100 bases:

>100_bases
CTTATAAGGCTTTGATTCAGCTTTTTGGCTTTTTGCTTTCTTTTTTTAGACGTGCCTGGAATGTATTTGCAATAGTTCAT
AAAACCTTGAGGTGATGTTT

Downstream 100 bases:

>100_bases
CACAAGTTTTATAGAACTTTTTCAAAAAAAATAAGCAAAATTACACAACTCACAAAAAAGTTGTTTGCATTTTAAAAAAA
AAGTACCGTCACAAGACTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator Xre Family; Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKEEVYREIGRRLWELRRQRGFTREQAARYLGISQKQLARYEKGREKISTDVLERLAGLYGCDYKYLLDDNESSSEQIAV
NFGTYKISDEDLEVIAFANQFVMNLNTMYNMDEELKMNHNLTNISSI

Sequences:

>Translated_127_residues
MKEEVYREIGRRLWELRRQRGFTREQAARYLGISQKQLARYEKGREKISTDVLERLAGLYGCDYKYLLDDNESSSEQIAV
NFGTYKISDEDLEVIAFANQFVMNLNTMYNMDEELKMNHNLTNISSI
>Mature_127_residues
MKEEVYREIGRRLWELRRQRGFTREQAARYLGISQKQLARYEKGREKISTDVLERLAGLYGCDYKYLLDDNESSSEQIAV
NFGTYKISDEDLEVIAFANQFVMNLNTMYNMDEELKMNHNLTNISSI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14990; Mature: 14990

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEVYREIGRRLWELRRQRGFTREQAARYLGISQKQLARYEKGREKISTDVLERLAGLY
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GCDYKYLLDDNESSSEQIAVNFGTYKISDEDLEVIAFANQFVMNLNTMYNMDEELKMNHN
CCCCEEEECCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
LTNISSI
CCCCCCC
>Mature Secondary Structure
MKEEVYREIGRRLWELRRQRGFTREQAARYLGISQKQLARYEKGREKISTDVLERLAGLY
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GCDYKYLLDDNESSSEQIAVNFGTYKISDEDLEVIAFANQFVMNLNTMYNMDEELKMNHN
CCCCEEEECCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
LTNISSI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA