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The map label for this gene is 20808351

Identifier: 20808351

GI number: 20808351

Start: 1893868

End: 1894788

Strand: Reverse

Name: 20808351

Synonym: TTE1947

Alternate gene names: NA

Gene position: 1894788-1893868 (Counterclockwise)

Preceding gene: 20808352

Following gene: 20808350

Centisome position: 70.45

GC content: 35.29

Gene sequence:

>921_bases
ATGGTCACATCTAAAATAGCTGAAATCCTCGTAGAAATCTTCATCGTTATGGCTGTCGGTTATTACGTAGCTTATATAAA
GCTTGTAAAAGAAGAACATTTCAAGATGCTAGCAGATTTAACCATTTTGGTTGCAACTCCACTGCTTATATTCTACAGCA
TGTATGTAAATTACACTCCAGAGCTATTAAAAGCCTCTTACAAATTGCCTCTTGTGAGCTCTTTTACTGTGGTTTTAACT
TTACTGATTTCTGCTTTTATTTTTAAACTACTTAAGGTTCCAGAAGAGAAGAAAAATGCTCTGTACGCTCTTTCTTCCTT
TAGCAATACTATATTTTTGGGTCTCCCAATAAATATGGCACTATTTGGGGATATAAGCCTTCCATATGTCATCCTCTACG
ATTTGGGGCATACACCTTTATTCTGGACTTTAGGCATCTGGGTTTTATCTGATGATAAATCTTTTGATGTAAAAGGACTT
AAACAGATTTTAAATCCCTCTTTTATTTCCATAGTTTTAAGCTTTATGGTAGCATCACTGCGAATACATGTACCAGAGGT
CATAATGAAGAGCGCTTATATGATAGGGAGTATAGCAATTCCAATGGCCCTTTTATTTATAGGGATGAATATGTACGTCA
TAGAAAAAGGAGACTTAAACTATTTGCTCTTTATTCCTGCTTTGATAAAGCTAATTTTAACCCCCTTAATCGCTTTTTTA
TTGGTCTATTATCTGAACCTGCCTGTTATTGCCAAGAAAGTTGCTGTACTTGAAGCTGCAATGCCCACAATGATTACTGT
GGCAATTGTCGCAAGGCAGATGAGTGAAAAGAACGGCTTTGCTTCTACAGTAGTCTTCATTGCAAACCTGCTTTCGTTTT
TAACAATACCAATATTTTTGGTGTTGATAAATAAACTTTAA

Upstream 100 bases:

>100_bases
ACCTAAAACAGTTTATATAAGGCTCAACTTTAAGTTGGGCCTTTTTTGTAAATATTTTAAAACTGTGGTATAATCGAAAT
TGACAGGATGAGGTGAAAAA

Downstream 100 bases:

>100_bases
GTGGAGGAGTGATAGCAAGTATGTTTAAAGTTTTTGTGACAAGAGCTATTCCAGAGGAGGGACTGGAACTTTTAAGGAAG
TATTGCGAAGTGGAGGTGAG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MVTSKIAEILVEIFIVMAVGYYVAYIKLVKEEHFKMLADLTILVATPLLIFYSMYVNYTPELLKASYKLPLVSSFTVVLT
LLISAFIFKLLKVPEEKKNALYALSSFSNTIFLGLPINMALFGDISLPYVILYDLGHTPLFWTLGIWVLSDDKSFDVKGL
KQILNPSFISIVLSFMVASLRIHVPEVIMKSAYMIGSIAIPMALLFIGMNMYVIEKGDLNYLLFIPALIKLILTPLIAFL
LVYYLNLPVIAKKVAVLEAAMPTMITVAIVARQMSEKNGFASTVVFIANLLSFLTIPIFLVLINKL

Sequences:

>Translated_306_residues
MVTSKIAEILVEIFIVMAVGYYVAYIKLVKEEHFKMLADLTILVATPLLIFYSMYVNYTPELLKASYKLPLVSSFTVVLT
LLISAFIFKLLKVPEEKKNALYALSSFSNTIFLGLPINMALFGDISLPYVILYDLGHTPLFWTLGIWVLSDDKSFDVKGL
KQILNPSFISIVLSFMVASLRIHVPEVIMKSAYMIGSIAIPMALLFIGMNMYVIEKGDLNYLLFIPALIKLILTPLIAFL
LVYYLNLPVIAKKVAVLEAAMPTMITVAIVARQMSEKNGFASTVVFIANLLSFLTIPIFLVLINKL
>Mature_306_residues
MVTSKIAEILVEIFIVMAVGYYVAYIKLVKEEHFKMLADLTILVATPLLIFYSMYVNYTPELLKASYKLPLVSSFTVVLT
LLISAFIFKLLKVPEEKKNALYALSSFSNTIFLGLPINMALFGDISLPYVILYDLGHTPLFWTLGIWVLSDDKSFDVKGL
KQILNPSFISIVLSFMVASLRIHVPEVIMKSAYMIGSIAIPMALLFIGMNMYVIEKGDLNYLLFIPALIKLILTPLIAFL
LVYYLNLPVIAKKVAVLEAAMPTMITVAIVARQMSEKNGFASTVVFIANLLSFLTIPIFLVLINKL

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34227; Mature: 34227

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTSKIAEILVEIFIVMAVGYYVAYIKLVKEEHFKMLADLTILVATPLLIFYSMYVNYTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLKASYKLPLVSSFTVVLTLLISAFIFKLLKVPEEKKNALYALSSFSNTIFLGLPINMA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCEE
LFGDISLPYVILYDLGHTPLFWTLGIWVLSDDKSFDVKGLKQILNPSFISIVLSFMVASL
EEECCCCCEEEEEECCCCCHHHHHEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
RIHVPEVIMKSAYMIGSIAIPMALLFIGMNMYVIEKGDLNYLLFIPALIKLILTPLIAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LVYYLNLPVIAKKVAVLEAAMPTMITVAIVARQMSEKNGFASTVVFIANLLSFLTIPIFL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLINKL
HHHHCC
>Mature Secondary Structure
MVTSKIAEILVEIFIVMAVGYYVAYIKLVKEEHFKMLADLTILVATPLLIFYSMYVNYTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLKASYKLPLVSSFTVVLTLLISAFIFKLLKVPEEKKNALYALSSFSNTIFLGLPINMA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCEE
LFGDISLPYVILYDLGHTPLFWTLGIWVLSDDKSFDVKGLKQILNPSFISIVLSFMVASL
EEECCCCCEEEEEECCCCCHHHHHEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
RIHVPEVIMKSAYMIGSIAIPMALLFIGMNMYVIEKGDLNYLLFIPALIKLILTPLIAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LVYYLNLPVIAKKVAVLEAAMPTMITVAIVARQMSEKNGFASTVVFIANLLSFLTIPIFL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLINKL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]