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The map label for this gene is UgpB3

Identifier: 20808322

GI number: 20808322

Start: 1855183

End: 1856469

Strand: Reverse

Name: UgpB3

Synonym: TTE1917

Alternate gene names: NA

Gene position: 1856469-1855183 (Counterclockwise)

Preceding gene: 20808323

Following gene: 20808320

Centisome position: 69.03

GC content: 35.59

Gene sequence:

>1287_bases
GTGAAAAAGGCCTTTACCTGGTTTTTATACCTTTTGATTTTTTTGTTTTTAGCCTACTGGCCTTTTTATATGAATTCTCA
AAAAAAGGCGGAATTAGAAGAGAGAAAGATAGAAGAAAGTTTCAAAGGCATAATAACCTTTTGGGATTTTCCTCACCCTT
TTGATGAGGATACATCAGGATTTGAATTTATAAAAAAGAAGATACAGGCTTTCCAGAATAAATATCCTGGTGTTGTGATA
GATTTTGAGCCTATTTCAGAGGGGGATGGAATAGAAAGGTTAAAAGAGGCCTTTTCAAAAGGAGTTCTTCCGGATGTATT
TCCAGTTAATCTGGAGCTTGTGCGGTTATACAAGGATTTTTTACAACCTATTACAAATTTTGTATCAAAAGAAGAGAAAA
GTGAATACAATGAAGAGGTATTAAAAGCCCTGTCTTTAAAAGAAGACATATACGGACTGCCTTTGGGTATGTACACAAAT
GTGATTTTTATAAACAGAGAAATATTTGAAGATAAGGAGATAAGCCTGCCTGAAAAAGGATATTGGAATTATGAAGAATT
TTTAAATGGTATGATAAAGGTCACAGAAAAGGATGATAAAAAACCTGTATTTGGATTGGGTATACCGCTTTTTAATGGCA
GTTACAGCCTTTGGGGCTTTTTGATGCTAGACGGAGGAAAAGTTTATGACAAGGGCAAATACGCTTTTTTTGGACCACAG
GCGATTTCCTCACTTCAAAAAGTGCTTGACATGGCTGGAAGATACAGTGTGATAAATCCAGTTTCACTGGAAGGAGATAG
AAAAAAACTGTGGGATGAGTTTACTCTATATAAAAATACAGCTGCATTAGTGGAAGAAAGTTATAAAATTGCTGAGCTTA
GCAATCTGTTTAAAAAGGGCAAATTATTTGAGTTTGATGTGGCTTTTTATCCTACGGGAGAAAGTGGCATACCTCTGACA
ATTTCTCCAAAAGTGTACGGGTATGGCATAAAAAAAGACAAAGATTTAAAGAAGTTAGAGATGGAATATAGGCTTATAAA
ATTTATTGTACAAGATCAAGAAGGAGTATTAAAATTAGGGTATGTACCTACAAAAAAGGGAATAGAGATTGGCGAGGAGA
AGATGAAAAAAATTGAAGAGGCGGTGAAATACACAGAACTGCCTCCCCTATGGGATAAGTGGGAGAAGGTCAATAACCTC
GTTATTGAAAGAGTAAAGGAAGGGATTAAGGAAGGAAAGAGCGCTTATGAGGTCATTGAGGGGATAAAAAAAGAAGTAGG
CGAGTGA

Upstream 100 bases:

>100_bases
GGATTGAAGATATGAATAAAAGGGCAGGGGAAAATCTCCCTGCCTTTTTAGTTATTTATAAGGCGGTGAGAGAATATAGT
TTATTATGAGGTGATATGAT

Downstream 100 bases:

>100_bases
GCTATTTTCTCACTGCTTCATAATAAGTGAGTGTATCTTTCAGTATTTCCTGGGCTATTGGAGCAGCTACTTCTCCTCCC
ATATGTCCACCTTGCGTCGG

Product: sugar-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MKKAFTWFLYLLIFLFLAYWPFYMNSQKKAELEERKIEESFKGIITFWDFPHPFDEDTSGFEFIKKKIQAFQNKYPGVVI
DFEPISEGDGIERLKEAFSKGVLPDVFPVNLELVRLYKDFLQPITNFVSKEEKSEYNEEVLKALSLKEDIYGLPLGMYTN
VIFINREIFEDKEISLPEKGYWNYEEFLNGMIKVTEKDDKKPVFGLGIPLFNGSYSLWGFLMLDGGKVYDKGKYAFFGPQ
AISSLQKVLDMAGRYSVINPVSLEGDRKKLWDEFTLYKNTAALVEESYKIAELSNLFKKGKLFEFDVAFYPTGESGIPLT
ISPKVYGYGIKKDKDLKKLEMEYRLIKFIVQDQEGVLKLGYVPTKKGIEIGEEKMKKIEEAVKYTELPPLWDKWEKVNNL
VIERVKEGIKEGKSAYEVIEGIKKEVGE

Sequences:

>Translated_428_residues
MKKAFTWFLYLLIFLFLAYWPFYMNSQKKAELEERKIEESFKGIITFWDFPHPFDEDTSGFEFIKKKIQAFQNKYPGVVI
DFEPISEGDGIERLKEAFSKGVLPDVFPVNLELVRLYKDFLQPITNFVSKEEKSEYNEEVLKALSLKEDIYGLPLGMYTN
VIFINREIFEDKEISLPEKGYWNYEEFLNGMIKVTEKDDKKPVFGLGIPLFNGSYSLWGFLMLDGGKVYDKGKYAFFGPQ
AISSLQKVLDMAGRYSVINPVSLEGDRKKLWDEFTLYKNTAALVEESYKIAELSNLFKKGKLFEFDVAFYPTGESGIPLT
ISPKVYGYGIKKDKDLKKLEMEYRLIKFIVQDQEGVLKLGYVPTKKGIEIGEEKMKKIEEAVKYTELPPLWDKWEKVNNL
VIERVKEGIKEGKSAYEVIEGIKKEVGE
>Mature_428_residues
MKKAFTWFLYLLIFLFLAYWPFYMNSQKKAELEERKIEESFKGIITFWDFPHPFDEDTSGFEFIKKKIQAFQNKYPGVVI
DFEPISEGDGIERLKEAFSKGVLPDVFPVNLELVRLYKDFLQPITNFVSKEEKSEYNEEVLKALSLKEDIYGLPLGMYTN
VIFINREIFEDKEISLPEKGYWNYEEFLNGMIKVTEKDDKKPVFGLGIPLFNGSYSLWGFLMLDGGKVYDKGKYAFFGPQ
AISSLQKVLDMAGRYSVINPVSLEGDRKKLWDEFTLYKNTAALVEESYKIAELSNLFKKGKLFEFDVAFYPTGESGIPLT
ISPKVYGYGIKKDKDLKKLEMEYRLIKFIVQDQEGVLKLGYVPTKKGIEIGEEKMKKIEEAVKYTELPPLWDKWEKVNNL
VIERVKEGIKEGKSAYEVIEGIKKEVGE

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49686; Mature: 49686

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFTWFLYLLIFLFLAYWPFYMNSQKKAELEERKIEESFKGIITFWDFPHPFDEDTSG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCH
FEFIKKKIQAFQNKYPGVVIDFEPISEGDGIERLKEAFSKGVLPDVFPVNLELVRLYKDF
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LQPITNFVSKEEKSEYNEEVLKALSLKEDIYGLPLGMYTNVIFINREIFEDKEISLPEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEEHHHCCCCCCCCCCCC
YWNYEEFLNGMIKVTEKDDKKPVFGLGIPLFNGSYSLWGFLMLDGGKVYDKGKYAFFGPQ
CCCHHHHHHHHEEEECCCCCCCEEEECCCEECCCCCEEEEEEECCCEEEECCCEEEECHH
AISSLQKVLDMAGRYSVINPVSLEGDRKKLWDEFTLYKNTAALVEESYKIAELSNLFKKG
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLFEFDVAFYPTGESGIPLTISPKVYGYGIKKDKDLKKLEMEYRLIKFIVQDQEGVLKLG
CEEEEEEEEEECCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
YVPTKKGIEIGEEKMKKIEEAVKYTELPPLWDKWEKVNNLVIERVKEGIKEGKSAYEVIE
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
GIKKEVGE
HHHHHHCC
>Mature Secondary Structure
MKKAFTWFLYLLIFLFLAYWPFYMNSQKKAELEERKIEESFKGIITFWDFPHPFDEDTSG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCH
FEFIKKKIQAFQNKYPGVVIDFEPISEGDGIERLKEAFSKGVLPDVFPVNLELVRLYKDF
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LQPITNFVSKEEKSEYNEEVLKALSLKEDIYGLPLGMYTNVIFINREIFEDKEISLPEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEEHHHCCCCCCCCCCCC
YWNYEEFLNGMIKVTEKDDKKPVFGLGIPLFNGSYSLWGFLMLDGGKVYDKGKYAFFGPQ
CCCHHHHHHHHEEEECCCCCCCEEEECCCEECCCCCEEEEEEECCCEEEECCCEEEECHH
AISSLQKVLDMAGRYSVINPVSLEGDRKKLWDEFTLYKNTAALVEESYKIAELSNLFKKG
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLFEFDVAFYPTGESGIPLTISPKVYGYGIKKDKDLKKLEMEYRLIKFIVQDQEGVLKLG
CEEEEEEEEEECCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
YVPTKKGIEIGEEKMKKIEEAVKYTELPPLWDKWEKVNNLVIERVKEGIKEGKSAYEVIE
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
GIKKEVGE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA