Click here to switch to the map view.

The map label for this gene is yaeB [C]

Identifier: 20808278

GI number: 20808278

Start: 1810223

End: 1810636

Strand: Reverse

Name: yaeB [C]

Synonym: TTE1866

Alternate gene names: 20808278

Gene position: 1810636-1810223 (Counterclockwise)

Preceding gene: 20808279

Following gene: 20808277

Centisome position: 67.32

GC content: 41.79

Gene sequence:

>414_bases
GTGGAACTAGTACCTATAGGTGTTATACACAGCCCTTATAAAAGGAAAGGGGAAGCGCCTCATCAAGGAAGGGCTAGGAA
TGAGGAGGCAATATTGGAAATATATCCTGAATTTCAGGAAGGGCTTCAAGAGATAGAGAAGAAAAAGCACATAATAGTTC
TTTATTGGTGCCATTTAGGGAAAAGAGACGTGATAAAAACGGCTACTCCGTGGGGACCGGAGATAAAAGGTGTTTTTGCT
ACCCGTTCACCTAATAGGCCTAATCCTATAGCTTTTTGTGTAGCGGACCTTATAAAGGTGGAGGGCAATAAGCTGTATGT
TAAAGGGGTTGATGCTCTTGATAAAAGTCCTATTCTGGACATAAAACCTTACGTATACGAGCTAGACAGTGTCAAACCAG
AAGATAGGCTGTAA

Upstream 100 bases:

>100_bases
TTCCGTCTGAGTTTTCAGACAGGAGGAACCGTCCCTCCCGTCTGAGTCCCTCCCGTCTGAATTTTTATTCTACTTTAACG
GAAAGGAAGGGAGAATTGCT

Downstream 100 bases:

>100_bases
AGGTAGAGGAGGATTTTTATGGACAAAAAGCTTTGGGAAGAATGTGTTTCCTTTCACGGGCATGAGTGCCCAGGACTTGC
AATAGGTTTTAGAGCCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MELVPIGVIHSPYKRKGEAPHQGRARNEEAILEIYPEFQEGLQEIEKKKHIIVLYWCHLGKRDVIKTATPWGPEIKGVFA
TRSPNRPNPIAFCVADLIKVEGNKLYVKGVDALDKSPILDIKPYVYELDSVKPEDRL

Sequences:

>Translated_137_residues
MELVPIGVIHSPYKRKGEAPHQGRARNEEAILEIYPEFQEGLQEIEKKKHIIVLYWCHLGKRDVIKTATPWGPEIKGVFA
TRSPNRPNPIAFCVADLIKVEGNKLYVKGVDALDKSPILDIKPYVYELDSVKPEDRL
>Mature_137_residues
MELVPIGVIHSPYKRKGEAPHQGRARNEEAILEIYPEFQEGLQEIEKKKHIIVLYWCHLGKRDVIKTATPWGPEIKGVFA
TRSPNRPNPIAFCVADLIKVEGNKLYVKGVDALDKSPILDIKPYVYELDSVKPEDRL

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=135, Percent_Identity=34.8148148148148, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1786393, Length=131, Percent_Identity=33.587786259542, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24586408, Length=133, Percent_Identity=32.3308270676692, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552503, Length=133, Percent_Identity=30.8270676691729, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003814
- InterPro:   IPR018316
- InterPro:   IPR001378 [H]

Pfam domain/function: PF02663 FwdE; PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 15615; Mature: 15615

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVPIGVIHSPYKRKGEAPHQGRARNEEAILEIYPEFQEGLQEIEKKKHIIVLYWCHLG
CCEECCCCCCCCHHHCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHCCCEEEEEEECCC
KRDVIKTATPWGPEIKGVFATRSPNRPNPIAFCVADLIKVEGNKLYVKGVDALDKSPILD
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
IKPYVYELDSVKPEDRL
CCCCEEECCCCCCCCCC
>Mature Secondary Structure
MELVPIGVIHSPYKRKGEAPHQGRARNEEAILEIYPEFQEGLQEIEKKKHIIVLYWCHLG
CCEECCCCCCCCHHHCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHCCCEEEEEEECCC
KRDVIKTATPWGPEIKGVFATRSPNRPNPIAFCVADLIKVEGNKLYVKGVDALDKSPILD
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
IKPYVYELDSVKPEDRL
CCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]