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The map label for this gene is 20808077

Identifier: 20808077

GI number: 20808077

Start: 1600529

End: 1602007

Strand: Reverse

Name: 20808077

Synonym: TTE1650

Alternate gene names: NA

Gene position: 1602007-1600529 (Counterclockwise)

Preceding gene: 20808078

Following gene: 20808076

Centisome position: 59.57

GC content: 34.62

Gene sequence:

>1479_bases
GTGAAAAAAACAAGAGACAACCCCTGTGATAAAATAGAACTTGGAAACAAAACATCACAGAAAGGGGTGTCTCTTGTGAA
AAAACATATCTTTGAGGATATTATACTACAAAATGCTCTAAATTTCACTGAGGAAGTAGTAGAAATTTTTGGTGATTTGT
TAAACAAAGGAATGAATATTACAGAGCTTGTAGCAAGGATAAAGGAACTCACGGACAAACTAGGTAGAGGGGCAATAGAA
GCAATTATTGAAGAGTTAGATAGGATAATAAAAGAAGACAAGAGAAGGAAAGAAAAATGGGTAGTAGAGAGGAAAGATAA
AAAGAGATTAACGACAGTCCTTGGGGATATTGAATATGAGAGGACATATTACAAATCTAAAGAGGATGGGAGATATACAT
ATTTGGTGGATGATGCATTAGAGATAGGACGGCACGATAGGATAGAAAAGGGAGTAAAGATAAAGTTAGTAGAAAACGCA
ATAGAAGAATCATATGAGAGAAGTAGTAAAAAAGCATGTCCAGAGGAGTTAAGTAAACAGACGGTATTAAATGCAATAAG
GGAAATAGGGGAAGTAGAAGTAAAGAGAGAAATAAAAGAAAAGAAAGAAGTAAGGGTTTTATACATAGAGGCAGACGAGG
ACCATGTACCTTTACAGGACGGGAGAGATGAAACTCCACGATTAGTATACATACATGAAGGTAGAGAAGAGAAAAACGGA
AGGAACGTACTGAAGAATGTCTATTACAAAGCATATGTAGGAGAGAAACCTGAAGACATATGGATAGATGTAGCAAATTA
CATAGAAGACAATTACAAAGAAGAGAAGATAGAGAAGATATACATAGCAGGAGATGGGGCACCGTGGATAAAAGAGGGAT
TAAAATGGATATTAAAATCAAGGTTTGTACTAGACAGATATCATTTAAACAAATACGTATTAAAAGCTACATCAAAAGAG
CCAAAGTATAGGGATAAGATATGGAGAGCAATAAATGAAGGGGATAAAGAAAGAGTAAAGAAGGTATTTGATGAGTTAAT
AAAGGCAGCAGAGGAAGAGAGAGAGAAAGAGAAGATAAAAGAAGCAAAGAAATACATACTAAACAATTGGGAAGGGATAA
AAATATACAACGAAGACGAAGATGTAATAGGGTGCAGTGCAGAAGGACATATAAGCCATGTATTTTCAGCAAGACTAAGC
AGGAATCCATTAGGGTGGAGCAGAGAAGGATTAAAACTAATGGCGAAATTAAGGGTATTTAGCAAGAATGGAGGAGACTT
AAGAGAAGTAGAATGGGGCAAGAAAAAGAATATAAATGCAGGAAGTTACAAATTAACGAAGAAGCAAATAAAAGAAGCGG
TAAGGAGAGTTAAAACGTCTACAAATGAAAAGATAAACAATATTACAGTTTTGAATATAGGGAAAGTAACGCCAATATAT
AGGGTTTTAAGAGCATTAAAATATGCACAAGTTATATAA

Upstream 100 bases:

>100_bases
CCTAAAGAGGGGACGCTTGTTAAAAGGGGAGAAGTTGTGGAAGTTGAGTTCAGGCCGAAGGAAAATTGACATAGTGTAAA
ATTATCGTAGGATTTTTTGA

Downstream 100 bases:

>100_bases
AAAAGCATGATAAGTTGAAGGCTGAAATTAACTAAGTTTCAGGGGTTGTCTTAAAAAAATCCTACAGTATCTTGACACTA
TCGAAAATTGAACTAGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MKKTRDNPCDKIELGNKTSQKGVSLVKKHIFEDIILQNALNFTEEVVEIFGDLLNKGMNITELVARIKELTDKLGRGAIE
AIIEELDRIIKEDKRRKEKWVVERKDKKRLTTVLGDIEYERTYYKSKEDGRYTYLVDDALEIGRHDRIEKGVKIKLVENA
IEESYERSSKKACPEELSKQTVLNAIREIGEVEVKREIKEKKEVRVLYIEADEDHVPLQDGRDETPRLVYIHEGREEKNG
RNVLKNVYYKAYVGEKPEDIWIDVANYIEDNYKEEKIEKIYIAGDGAPWIKEGLKWILKSRFVLDRYHLNKYVLKATSKE
PKYRDKIWRAINEGDKERVKKVFDELIKAAEEEREKEKIKEAKKYILNNWEGIKIYNEDEDVIGCSAEGHISHVFSARLS
RNPLGWSREGLKLMAKLRVFSKNGGDLREVEWGKKKNINAGSYKLTKKQIKEAVRRVKTSTNEKINNITVLNIGKVTPIY
RVLRALKYAQVI

Sequences:

>Translated_492_residues
MKKTRDNPCDKIELGNKTSQKGVSLVKKHIFEDIILQNALNFTEEVVEIFGDLLNKGMNITELVARIKELTDKLGRGAIE
AIIEELDRIIKEDKRRKEKWVVERKDKKRLTTVLGDIEYERTYYKSKEDGRYTYLVDDALEIGRHDRIEKGVKIKLVENA
IEESYERSSKKACPEELSKQTVLNAIREIGEVEVKREIKEKKEVRVLYIEADEDHVPLQDGRDETPRLVYIHEGREEKNG
RNVLKNVYYKAYVGEKPEDIWIDVANYIEDNYKEEKIEKIYIAGDGAPWIKEGLKWILKSRFVLDRYHLNKYVLKATSKE
PKYRDKIWRAINEGDKERVKKVFDELIKAAEEEREKEKIKEAKKYILNNWEGIKIYNEDEDVIGCSAEGHISHVFSARLS
RNPLGWSREGLKLMAKLRVFSKNGGDLREVEWGKKKNINAGSYKLTKKQIKEAVRRVKTSTNEKINNITVLNIGKVTPIY
RVLRALKYAQVI
>Mature_492_residues
MKKTRDNPCDKIELGNKTSQKGVSLVKKHIFEDIILQNALNFTEEVVEIFGDLLNKGMNITELVARIKELTDKLGRGAIE
AIIEELDRIIKEDKRRKEKWVVERKDKKRLTTVLGDIEYERTYYKSKEDGRYTYLVDDALEIGRHDRIEKGVKIKLVENA
IEESYERSSKKACPEELSKQTVLNAIREIGEVEVKREIKEKKEVRVLYIEADEDHVPLQDGRDETPRLVYIHEGREEKNG
RNVLKNVYYKAYVGEKPEDIWIDVANYIEDNYKEEKIEKIYIAGDGAPWIKEGLKWILKSRFVLDRYHLNKYVLKATSKE
PKYRDKIWRAINEGDKERVKKVFDELIKAAEEEREKEKIKEAKKYILNNWEGIKIYNEDEDVIGCSAEGHISHVFSARLS
RNPLGWSREGLKLMAKLRVFSKNGGDLREVEWGKKKNINAGSYKLTKKQIKEAVRRVKTSTNEKINNITVLNIGKVTPIY
RVLRALKYAQVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0236 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1650_THETN (Q8R6I9)

Other databases:

- EMBL:   AE008691
- EMBL:   AE008691
- RefSeq:   NP_623248.1
- RefSeq:   NP_624221.1
- GeneID:   996204
- GeneID:   997558
- GenomeReviews:   AE008691_GR
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1650
- KEGG:   tte:TTE2708
- HOGENOM:   HBG312346
- OMA:   EFLINEY
- ProtClustDB:   CLSK900585
- BioCyc:   TTEN273068:TTE1650-MONOMER
- BioCyc:   TTEN273068:TTE2708-MONOMER
- InterPro:   IPR009620

Pfam domain/function: PF06782 UPF0236

EC number: NA

Molecular weight: Translated: 57516; Mature: 57516

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTRDNPCDKIELGNKTSQKGVSLVKKHIFEDIILQNALNFTEEVVEIFGDLLNKGMNI
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TELVARIKELTDKLGRGAIEAIIEELDRIIKEDKRRKEKWVVERKDKKRLTTVLGDIEYE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RTYYKSKEDGRYTYLVDDALEIGRHDRIEKGVKIKLVENAIEESYERSSKKACPEELSKQ
HHHHCCCCCCCEEEEEHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHH
TVLNAIREIGEVEVKREIKEKKEVRVLYIEADEDHVPLQDGRDETPRLVYIHEGREEKNG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCH
RNVLKNVYYKAYVGEKPEDIWIDVANYIEDNYKEEKIEKIYIAGDGAPWIKEGLKWILKS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHEEEEEEECCCCHHHHHHHHHHHHH
RFVLDRYHLNKYVLKATSKEPKYRDKIWRAINEGDKERVKKVFDELIKAAEEEREKEKIK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAKKYILNNWEGIKIYNEDEDVIGCSAEGHISHVFSARLSRNPLGWSREGLKLMAKLRVF
HHHHHHHCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SKNGGDLREVEWGKKKNINAGSYKLTKKQIKEAVRRVKTSTNEKINNITVLNIGKVTPIY
CCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
RVLRALKYAQVI
HHHHHHHHHHCC
>Mature Secondary Structure
MKKTRDNPCDKIELGNKTSQKGVSLVKKHIFEDIILQNALNFTEEVVEIFGDLLNKGMNI
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TELVARIKELTDKLGRGAIEAIIEELDRIIKEDKRRKEKWVVERKDKKRLTTVLGDIEYE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RTYYKSKEDGRYTYLVDDALEIGRHDRIEKGVKIKLVENAIEESYERSSKKACPEELSKQ
HHHHCCCCCCCEEEEEHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHH
TVLNAIREIGEVEVKREIKEKKEVRVLYIEADEDHVPLQDGRDETPRLVYIHEGREEKNG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCH
RNVLKNVYYKAYVGEKPEDIWIDVANYIEDNYKEEKIEKIYIAGDGAPWIKEGLKWILKS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHEEEEEEECCCCHHHHHHHHHHHHH
RFVLDRYHLNKYVLKATSKEPKYRDKIWRAINEGDKERVKKVFDELIKAAEEEREKEKIK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAKKYILNNWEGIKIYNEDEDVIGCSAEGHISHVFSARLSRNPLGWSREGLKLMAKLRVF
HHHHHHHCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SKNGGDLREVEWGKKKNINAGSYKLTKKQIKEAVRRVKTSTNEKINNITVLNIGKVTPIY
CCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
RVLRALKYAQVI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336