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The map label for this gene is yfcA [C]

Identifier: 20807985

GI number: 20807985

Start: 1515576

End: 1516331

Strand: Reverse

Name: yfcA [C]

Synonym: TTE1554

Alternate gene names: 20807985

Gene position: 1516331-1515576 (Counterclockwise)

Preceding gene: 20807986

Following gene: 20807983

Centisome position: 56.38

GC content: 33.47

Gene sequence:

>756_bases
ATGAGTAATTACGTAATAATTTTAGTGGCTTCTATTTTAGCAGGAGCTACTAATGCAATAGCAGGAGGGGGTACTTTAAT
AACCTTTCCTGCTCTTGTATGGGTTGGAATAAATCCTCTATCTGCCAATATAACAAATACTGTTGCTCTTTGGACTGGTT
CTGTCACAGGTGCATGGGCATTTAAAGAAAGACTGTATCAGACGAAAGAGCTTTTAAGGTTTCTGACATTGCCTTCTTTA
CTTGGGGGTATCTTAGGAGCTTATCTTCTTATGATAACTTCTCACAAAGTCTTTGATTTTATTATGCCTTTTTTAGTTAT
GTTCGCTACTGTGGTTTTAGCATTAAATGAAAGAATAAACAAATTTAATCTGATTGATGATAGAAATAACAAAAATAAAT
CATTAGTAGCCGTTTTTATACTACAGTTTCTTACTTCTTTATATGGTGGATATTTTGCAGCAGGTATAGGCATTTTAATG
CTGGCAACTTTAGGAACTGCAGGTATTACCGATATCCATACTGCGAATGGCATAAAAAATATATTATCTCTTTTTATAAA
TATAACTTCAGGTTTGGTCTTGATTTTCAGCGGTAAAGTGGTATGGGTATACGCATTTATTTTAATGTTAGGTTTTGCTT
TGGGAGGTTATTTAGGGGCAGTGATATCACAAAGGTTTGATGGAAGAAAAGTAAAAAATTTTGTAGTCTTATGGGGATTT
ATTTTAGCAGTAATGTTTTGGGTAAGAGGAGTTTAA

Upstream 100 bases:

>100_bases
TAGTTCCCATGATAATAACGATAGGTTACAAGGACCCAAGTAAAGATTTACTGCCAAGAGCCTATAGATTTAAATTTGAT
GAATTTGGAGAGATAATCTA

Downstream 100 bases:

>100_bases
TTTTGGAGGTGTAGATGTGAAAAGAGCCTTATTTTTAATACCTGTAGTTTTATTCATATTTTTTATGCCTTTTTCAGTAG
CTTATGCTAAAGACTACAGT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSNYVIILVASILAGATNAIAGGGTLITFPALVWVGINPLSANITNTVALWTGSVTGAWAFKERLYQTKELLRFLTLPSL
LGGILGAYLLMITSHKVFDFIMPFLVMFATVVLALNERINKFNLIDDRNNKNKSLVAVFILQFLTSLYGGYFAAGIGILM
LATLGTAGITDIHTANGIKNILSLFINITSGLVLIFSGKVVWVYAFILMLGFALGGYLGAVISQRFDGRKVKNFVVLWGF
ILAVMFWVRGV

Sequences:

>Translated_251_residues
MSNYVIILVASILAGATNAIAGGGTLITFPALVWVGINPLSANITNTVALWTGSVTGAWAFKERLYQTKELLRFLTLPSL
LGGILGAYLLMITSHKVFDFIMPFLVMFATVVLALNERINKFNLIDDRNNKNKSLVAVFILQFLTSLYGGYFAAGIGILM
LATLGTAGITDIHTANGIKNILSLFINITSGLVLIFSGKVVWVYAFILMLGFALGGYLGAVISQRFDGRKVKNFVVLWGF
ILAVMFWVRGV
>Mature_250_residues
SNYVIILVASILAGATNAIAGGGTLITFPALVWVGINPLSANITNTVALWTGSVTGAWAFKERLYQTKELLRFLTLPSLL
GGILGAYLLMITSHKVFDFIMPFLVMFATVVLALNERINKFNLIDDRNNKNKSLVAVFILQFLTSLYGGYFAAGIGILML
ATLGTAGITDIHTANGIKNILSLFINITSGLVLIFSGKVVWVYAFILMLGFALGGYLGAVISQRFDGRKVKNFVVLWGFI
LAVMFWVRGV

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=215, Percent_Identity=26.046511627907, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27267; Mature: 27136

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYVIILVASILAGATNAIAGGGTLITFPALVWVGINPLSANITNTVALWTGSVTGAWA
CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCHHHH
FKERLYQTKELLRFLTLPSLLGGILGAYLLMITSHKVFDFIMPFLVMFATVVLALNERIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFNLIDDRNNKNKSLVAVFILQFLTSLYGGYFAAGIGILMLATLGTAGITDIHTANGIKN
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ILSLFINITSGLVLIFSGKVVWVYAFILMLGFALGGYLGAVISQRFDGRKVKNFVVLWGF
HHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILAVMFWVRGV
HHHHHHHHCCC
>Mature Secondary Structure 
SNYVIILVASILAGATNAIAGGGTLITFPALVWVGINPLSANITNTVALWTGSVTGAWA
CCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCHHHH
FKERLYQTKELLRFLTLPSLLGGILGAYLLMITSHKVFDFIMPFLVMFATVVLALNERIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFNLIDDRNNKNKSLVAVFILQFLTSLYGGYFAAGIGILMLATLGTAGITDIHTANGIKN
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ILSLFINITSGLVLIFSGKVVWVYAFILMLGFALGGYLGAVISQRFDGRKVKNFVVLWGF
HHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILAVMFWVRGV
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]