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The map label for this gene is comM [H]

Identifier: 20807902

GI number: 20807902

Start: 1429309

End: 1430841

Strand: Reverse

Name: comM [H]

Synonym: TTE1455

Alternate gene names: 20807902

Gene position: 1430841-1429309 (Counterclockwise)

Preceding gene: 20807903

Following gene: 20807901

Centisome position: 53.2

GC content: 40.31

Gene sequence:

>1533_bases
ATGCTCTCTAAAGTAAAAACCATGGCCATTTTAGGAATAGACGCATATGTAGTAGATGTAGAAATAGATTTAGGGACAGG
GATACCTTCTTTTGACATAGTGGGATTAGGGGATACAGAGGTAAAGGAGGCAAGAGATAGGGTAAGGGCAGCTATAAAAA
ACAGCGGATTTGACTTTCCTTTAAAGAAGATAACGGTAAATCTCGCCCCTGCCGACATTAAAAAAGAGGGCACCGCTTTT
GATTTGCCTCTAGCAGTAGGGATTCTGAAAGGAACTGAGGTAGTGAAAAATGACCTAGAGAACATTGCTTTTATTGGAGA
GCTTTCTTTAGACGGTAGCTTAAGGGGAGTAAATGGCGTTCTTCCAATGGTGATGGGGGCAAAAGAAAGTGGAATCTTAT
CTGTAGTAGTGCCTTATGAAAATGCCCAAGAGGCCTCTGTAGTTAAAGGAATAAATGTGTATGCAATGAAGAGTTTAAAG
GAAGTAGTAGAGTTTTTAAATGAGGAAAAGACCTTTAATCCTTTTTCTTTAGATATAGAAAATTTCTTTAAAAGCCCGGA
CTATGGGGTAGACTTTTCAGAAGTTAAAGGACAAGAAAACGCAAAAAGAGTTTTAGAAATAGCTGCGGCGGGTTCCCATA
ACGTGCTCATGATAGGACCGCCAGGTTCTGGCAAGACAATGTTGGCAAGGCGTTTTCCCACCATTCTTCCTCCTTTGTCC
TTTGAAGAAGCATTAGAAGTAACAAAGATATACAGCATCGCAGGGCTTTTGCCCAAAGGGACGCCTCTTATGACAGCAAG
GCCTTTTAGGTCTCCTCATCACACTGTTTCTACAGTTGCCTTGGTAGGTGGTGGTAAATATCCAAAGCCTGGAGAAGTAT
CTTTAGCTCACCACGGAGTTTTGTTTTTGGACGAGATTCCTGAGTTTAAAAAAGATGCCATTGAAGTTTTAAGGCAACCT
TTAGAGGACGAGTTTGTAACTATCACTAGGGTCAACGGAAGCTTTACATATCCCAGCAAGTTCATATTGATCCTCGCGAT
GAATCCTTGTCCTTGTGGTTATTACGGTGATGATACTCATGAATGTCACTGCAGTGTAAATGAGATAAGGCGATATCAGA
ACAAGATTTCTGGCCCTTTGCTGGACAGAATAGATTTGCACGTGGAGGTAAGACCTCTTAAAAAAGGGCACTATTTTGAA
GAGGGTGAAGAGACAGAAACTTCTGCCACTATTAGGGAAAGGGTTGAAAAAGCGAGGAAAATTCAGCTTGAGAGGTACAA
GAATATAGGCATATTTTCAAATTCCCAGTTAAAAGGAAATTTGCTTAAAAAATACTGCAGACTTGACACTAGAACAAAAA
AATTTTTAGAAGAGGCCTTTGACAAACTTTCTTTAAGTGCCAGAGGGTATAACAAAGTTTTAAAAGTGGCTCGCACAATC
GCAGATTTGGAAGGGGAAGAAAATATTAAGTTAGAACACGTGGCAGAGGCACTGCAGTACAGAATTGCTGACAGTAAATA
CTGGTATAAATGA

Upstream 100 bases:

>100_bases
AGTAGACTTTGTAAAAGCTTCAACTGTATTGCTAGAAGATTTTAGAAAGGGGAACTTGGGGAGAATTTCGCTTGAAGAAC
CTTAAGGGGGAAATATTGTC

Downstream 100 bases:

>100_bases
GAAGGTGTGATGCTGTGAATGTAAAGGACATATTCAATAAAGAGGGCATTAAGAATATTTTTTTCATATTGGTCGGGACT
TTTATATCCTCTATAGGGAT

Product: ATPase with chaperone activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MLSKVKTMAILGIDAYVVDVEIDLGTGIPSFDIVGLGDTEVKEARDRVRAAIKNSGFDFPLKKITVNLAPADIKKEGTAF
DLPLAVGILKGTEVVKNDLENIAFIGELSLDGSLRGVNGVLPMVMGAKESGILSVVVPYENAQEASVVKGINVYAMKSLK
EVVEFLNEEKTFNPFSLDIENFFKSPDYGVDFSEVKGQENAKRVLEIAAAGSHNVLMIGPPGSGKTMLARRFPTILPPLS
FEEALEVTKIYSIAGLLPKGTPLMTARPFRSPHHTVSTVALVGGGKYPKPGEVSLAHHGVLFLDEIPEFKKDAIEVLRQP
LEDEFVTITRVNGSFTYPSKFILILAMNPCPCGYYGDDTHECHCSVNEIRRYQNKISGPLLDRIDLHVEVRPLKKGHYFE
EGEETETSATIRERVEKARKIQLERYKNIGIFSNSQLKGNLLKKYCRLDTRTKKFLEEAFDKLSLSARGYNKVLKVARTI
ADLEGEENIKLEHVAEALQYRIADSKYWYK

Sequences:

>Translated_510_residues
MLSKVKTMAILGIDAYVVDVEIDLGTGIPSFDIVGLGDTEVKEARDRVRAAIKNSGFDFPLKKITVNLAPADIKKEGTAF
DLPLAVGILKGTEVVKNDLENIAFIGELSLDGSLRGVNGVLPMVMGAKESGILSVVVPYENAQEASVVKGINVYAMKSLK
EVVEFLNEEKTFNPFSLDIENFFKSPDYGVDFSEVKGQENAKRVLEIAAAGSHNVLMIGPPGSGKTMLARRFPTILPPLS
FEEALEVTKIYSIAGLLPKGTPLMTARPFRSPHHTVSTVALVGGGKYPKPGEVSLAHHGVLFLDEIPEFKKDAIEVLRQP
LEDEFVTITRVNGSFTYPSKFILILAMNPCPCGYYGDDTHECHCSVNEIRRYQNKISGPLLDRIDLHVEVRPLKKGHYFE
EGEETETSATIRERVEKARKIQLERYKNIGIFSNSQLKGNLLKKYCRLDTRTKKFLEEAFDKLSLSARGYNKVLKVARTI
ADLEGEENIKLEHVAEALQYRIADSKYWYK
>Mature_510_residues
MLSKVKTMAILGIDAYVVDVEIDLGTGIPSFDIVGLGDTEVKEARDRVRAAIKNSGFDFPLKKITVNLAPADIKKEGTAF
DLPLAVGILKGTEVVKNDLENIAFIGELSLDGSLRGVNGVLPMVMGAKESGILSVVVPYENAQEASVVKGINVYAMKSLK
EVVEFLNEEKTFNPFSLDIENFFKSPDYGVDFSEVKGQENAKRVLEIAAAGSHNVLMIGPPGSGKTMLARRFPTILPPLS
FEEALEVTKIYSIAGLLPKGTPLMTARPFRSPHHTVSTVALVGGGKYPKPGEVSLAHHGVLFLDEIPEFKKDAIEVLRQP
LEDEFVTITRVNGSFTYPSKFILILAMNPCPCGYYGDDTHECHCSVNEIRRYQNKISGPLLDRIDLHVEVRPLKKGHYFE
EGEETETSATIRERVEKARKIQLERYKNIGIFSNSQLKGNLLKKYCRLDTRTKKFLEEAFDKLSLSARGYNKVLKVARTI
ADLEGEENIKLEHVAEALQYRIADSKYWYK

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=505, Percent_Identity=42.5742574257426, Blast_Score=394, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 56644; Mature: 56644

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKVKTMAILGIDAYVVDVEIDLGTGIPSFDIVGLGDTEVKEARDRVRAAIKNSGFDFP
CCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
LKKITVNLAPADIKKEGTAFDLPLAVGILKGTEVVKNDLENIAFIGELSLDGSLRGVNGV
HHHEEEEECCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHEEEEEEEECCCCCCCCCCC
LPMVMGAKESGILSVVVPYENAQEASVVKGINVYAMKSLKEVVEFLNEEKTFNPFSLDIE
HHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
NFFKSPDYGVDFSEVKGQENAKRVLEIAAAGSHNVLMIGPPGSGKTMLARRFPTILPPLS
HHHCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCC
FEEALEVTKIYSIAGLLPKGTPLMTARPFRSPHHTVSTVALVGGGKYPKPGEVSLAHHGV
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCE
LFLDEIPEFKKDAIEVLRQPLEDEFVTITRVNGSFTYPSKFILILAMNPCPCGYYGDDTH
EEEHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCEEEEEEEECCCCCCCCCCCCC
ECHCSVNEIRRYQNKISGPLLDRIDLHVEVRPLKKGHYFEEGEETETSATIRERVEKARK
EEECCHHHHHHHHHHHCCCCHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
IQLERYKNIGIFSNSQLKGNLLKKYCRLDTRTKKFLEEAFDKLSLSARGYNKVLKVARTI
HHHHHHCCCCEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ADLEGEENIKLEHVAEALQYRIADSKYWYK
HHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSKVKTMAILGIDAYVVDVEIDLGTGIPSFDIVGLGDTEVKEARDRVRAAIKNSGFDFP
CCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
LKKITVNLAPADIKKEGTAFDLPLAVGILKGTEVVKNDLENIAFIGELSLDGSLRGVNGV
HHHEEEEECCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHEEEEEEEECCCCCCCCCCC
LPMVMGAKESGILSVVVPYENAQEASVVKGINVYAMKSLKEVVEFLNEEKTFNPFSLDIE
HHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
NFFKSPDYGVDFSEVKGQENAKRVLEIAAAGSHNVLMIGPPGSGKTMLARRFPTILPPLS
HHHCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCC
FEEALEVTKIYSIAGLLPKGTPLMTARPFRSPHHTVSTVALVGGGKYPKPGEVSLAHHGV
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCE
LFLDEIPEFKKDAIEVLRQPLEDEFVTITRVNGSFTYPSKFILILAMNPCPCGYYGDDTH
EEEHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCEEEEEEEECCCCCCCCCCCCC
ECHCSVNEIRRYQNKISGPLLDRIDLHVEVRPLKKGHYFEEGEETETSATIRERVEKARK
EEECCHHHHHHHHHHHCCCCHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
IQLERYKNIGIFSNSQLKGNLLKKYCRLDTRTKKFLEEAFDKLSLSARGYNKVLKVARTI
HHHHHHCCCCEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ADLEGEENIKLEHVAEALQYRIADSKYWYK
HHCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]