Click here to switch to the map view.

The map label for this gene is FlgD [H]

Identifier: 20807882

GI number: 20807882

Start: 1411549

End: 1411944

Strand: Reverse

Name: FlgD [H]

Synonym: TTE1435

Alternate gene names: 20807882

Gene position: 1411944-1411549 (Counterclockwise)

Preceding gene: 20807883

Following gene: 20807881

Centisome position: 52.5

GC content: 37.63

Gene sequence:

>396_bases
GTGAATGTAAATACAAACTACAGTGTACTGCCTCCTTCCAATCAGAATAAAGTCACTACAAAAAGCAAGTTAGGAAAAGA
TGATTTTCTGATGCTTCTTGTGACTCAGCTAAAAAATCAGGACCCTTTAAATCCTGTAGATGACAAGGAGTTTCTTGCAC
AGCTTGCGCAGTTTTCTGCTTTAGAGCAAATGCAGAATTTGAATGAAAGTTTTAACTCTGTAAAAGCTATAGCGCTTATA
GGCAAAAACGTGTACGCTACTATAAATGACGGGAATGGAAATTACAAAGAAGTTTTTGGAAAAGTTGATGCTGTGTACAG
AGAAAATGGGCAGTACTTTCTCAAAGTAAAAGGCTTAGATATACCTTTGGACGCTGTGAGAGCTGTCACTGAGTGA

Upstream 100 bases:

>100_bases
AAAAGTATTTGCCAAGTGAAGAGCTAGACCTTACTTCTCAAAATTATTATTTCAAAGATGGCCATCTTGACCTGATGGCA
TAGAAAGGAGAGGCTTTAAA

Downstream 100 bases:

>100_bases
GGTGATACTTTGAAAGTCCATTTTAATTCGCTGAATGGACCTTCTATACAGAAGCCCCAGCCTTCTTACGGGGAAGCTTT
TAAACAGGTTTTTGAAGAAA

Product: flagellar hook capping protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNVNTNYSVLPPSNQNKVTTKSKLGKDDFLMLLVTQLKNQDPLNPVDDKEFLAQLAQFSALEQMQNLNESFNSVKAIALI
GKNVYATINDGNGNYKEVFGKVDAVYRENGQYFLKVKGLDIPLDAVRAVTE

Sequences:

>Translated_131_residues
MNVNTNYSVLPPSNQNKVTTKSKLGKDDFLMLLVTQLKNQDPLNPVDDKEFLAQLAQFSALEQMQNLNESFNSVKAIALI
GKNVYATINDGNGNYKEVFGKVDAVYRENGQYFLKVKGLDIPLDAVRAVTE
>Mature_131_residues
MNVNTNYSVLPPSNQNKVTTKSKLGKDDFLMLLVTQLKNQDPLNPVDDKEFLAQLAQFSALEQMQNLNESFNSVKAIALI
GKNVYATINDGNGNYKEVFGKVDAVYRENGQYFLKVKGLDIPLDAVRAVTE

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 14601; Mature: 14601

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNTNYSVLPPSNQNKVTTKSKLGKDDFLMLLVTQLKNQDPLNPVDDKEFLAQLAQFSA
CCCCCCCEEECCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LEQMQNLNESFNSVKAIALIGKNVYATINDGNGNYKEVFGKVDAVYRENGQYFLKVKGLD
HHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCC
IPLDAVRAVTE
CCHHHHHHHCC
>Mature Secondary Structure
MNVNTNYSVLPPSNQNKVTTKSKLGKDDFLMLLVTQLKNQDPLNPVDDKEFLAQLAQFSA
CCCCCCCEEECCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LEQMQNLNESFNSVKAIALIGKNVYATINDGNGNYKEVFGKVDAVYRENGQYFLKVKGLD
HHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCC
IPLDAVRAVTE
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]