| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is FlgE3 [H]
Identifier: 20807880
GI number: 20807880
Start: 1409861
End: 1411108
Strand: Reverse
Name: FlgE3 [H]
Synonym: TTE1433
Alternate gene names: 20807880
Gene position: 1411108-1409861 (Counterclockwise)
Preceding gene: 20807881
Following gene: 20807879
Centisome position: 52.47
GC content: 41.51
Gene sequence:
>1248_bases ATGTTAAGGTCAATGTATTCTGCCATTTCAGGTTTACAGGCTCATCAGGCAAGGTTGGATGTTATTGGAAATAATATAGC CAATGTAAATACAGTGGGGTATAAGGCAAGCAGGATGACTTTTAAAGAGATATTCAGCCAGACCATAAAAGGAGCTTCGG CTCCTCAAGGAAATGGCGGAGGAACAAACCCTCAGCAAATTGGTCTGGGAGTTGCCATAGCTTCTATTGATACTTTATTT ACAAGAGGAGGAGCCCAGAGAACTGACAACCCAACAGATTTGTCAATTGACGGAAATGGATTTTTCATAGTTTCAAATGG GGAATCAATTCTTTACACGAGGGCGGGAAATTTTAGTTTTGACTCTAATGGAGACTTGGTAACTCCTGATGGATATAAAG TTTTAGGATGGATGTCAACTGATGGCAAGACAGTGAACACTGACACCGGGAATTTGGTTCCGATAAGCCTTAAAAACTGG TTTGGGATGGAGCCTTCTACCACTACTCAATTAGAAATAGGCGGAAATTTGAATGCTTCTACTGGAATAGGTCAGAGCAT AAGCTACAACATAATCGTCTATGACACACAAGGTGGAAGCCATGTGGCTACAATAACTTTCACAAGGCAAGACCCCAATA CCTGGAACTGGAGTGTATCTTCTCAAGACCCGTATATTTCTTCTGTCTCTGTCGCTGGTTCAACGGCAATCACTTTTGGA GCTGATGGAAAGATAGCTCCTAATACGCAGGCTACCGGAACTTTAACCTTTAACATGAACACAGCAGTTACAAATGCTCA GATTGGCCCTGTCAATATTGACCTTTCAAAGCTTACAATGTTCTCAACAGAAACAGATTTGAGAGAATTAAGCAAAAATG GCAATGAGGCAGGGTCTTTGCAGAGCATCAACATTGACAAGTACGGGGTTGTATCCGGTATATATTCAAACGGCAGAAGA CAGGTAATAGGGCAGATAGCTCTTGCTGACTTCCAGAACCCCATGGGTTTAGAAAAAGTAGGAAATACGATGTTTATAAA TACAGTTAACTCAGGAGAACCCATGATAGGAGCAGCAGGAAGTGGAACCAGAGGCAGCATAAACCCAGGGACTTTAGAGA TGTCAAATGTCAACTTGGCTAATGAATTTGTAGACATGATTACAACTCAGAGAGGTTTTCAGGCTAATGCTAAGGTTATA ACCGTCTCCGATGAAATGCTGCAGGATTTAGTGAATATGAAGAGATAA
Upstream 100 bases:
>100_bases ACGGCGCTGTGATAATATAAGCCGGACCTTAACAGGGGGCTTATCCGCTTTCGACTGACAGAGAAAGCGGGCAGCGCTTA AAATAAAAGGAGGAGAGAGA
Downstream 100 bases:
>100_bases AGTTTAGCCTGCTGGGGGTACCCCCGGCAGGCTTGATGGAGGAAAAACATGATTTATGTGACAAGGCTCAATGATGAAGA GTTTGTCGTGAATGCAGACC
Product: flagellar basal body and hook proteins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGGGTNPQQIGLGVAIASIDTLF TRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSFDSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNW FGMEPSTTTQLEIGGNLNASTGIGQSISYNIIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVSVAGSTAITFG ADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTETDLRELSKNGNEAGSLQSINIDKYGVVSGIYSNGRR QVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVI TVSDEMLQDLVNMKR
Sequences:
>Translated_415_residues MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGGGTNPQQIGLGVAIASIDTLF TRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSFDSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNW FGMEPSTTTQLEIGGNLNASTGIGQSISYNIIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVSVAGSTAITFG ADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTETDLRELSKNGNEAGSLQSINIDKYGVVSGIYSNGRR QVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVI TVSDEMLQDLVNMKR >Mature_415_residues MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGGGTNPQQIGLGVAIASIDTLF TRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSFDSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNW FGMEPSTTTQLEIGGNLNASTGIGQSISYNIIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVSVAGSTAITFG ADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTETDLRELSKNGNEAGSLQSINIDKYGVVSGIYSNGRR QVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVI TVSDEMLQDLVNMKR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=423, Percent_Identity=33.5697399527187, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1787318, Length=138, Percent_Identity=41.304347826087, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 43974; Mature: 43974
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG CCHHHHHHHHCHHHHHHEEEECCCCCCCEEECCEEHHHHHHHHHHHHHHCCCCCCCCCCC GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSF CCCHHHHEEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCCC DSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWFGMEPSTTTQLEIGGNLNAS CCCCCEECCCCEEEEEEEECCCEEEECCCCCEEEEEEHHCCCCCCCCCEEEEECCCCCCC TGIGQSISYNIIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVSVAGSTAITFG CCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEC ADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTETDLRELSKNGNEAGSL CCCCCCCCCCCCEEEEEEECEEEECCCCCCEEEEHHHEEEEECHHHHHHHHCCCCCCCCE QSINIDKYGVVSGIYSNGRRQVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAG EEECCCCCEEEEHHHCCCCEEEHHHEEEHHCCCCCCHHHCCCEEEEEEECCCCCEEEECC SGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVITVSDEMLQDLVNMKR CCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCC >Mature Secondary Structure MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG CCHHHHHHHHCHHHHHHEEEECCCCCCCEEECCEEHHHHHHHHHHHHHHCCCCCCCCCCC GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSF CCCHHHHEEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCCC DSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWFGMEPSTTTQLEIGGNLNAS CCCCCEECCCCEEEEEEEECCCEEEECCCCCEEEEEEHHCCCCCCCCCEEEEECCCCCCC TGIGQSISYNIIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVSVAGSTAITFG CCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEC ADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTETDLRELSKNGNEAGSL CCCCCCCCCCCCEEEEEEECEEEECCCCCCEEEEHHHEEEEECHHHHHHHHCCCCCCCCE QSINIDKYGVVSGIYSNGRRQVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAG EEECCCCCEEEEHHHCCCCEEEHHHEEEHHCCCCCCHHHCCCEEEEEEECCCCCEEEECC SGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVITVSDEMLQDLVNMKR CCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]