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The map label for this gene is ylxR [H]

Identifier: 20807842

GI number: 20807842

Start: 1377867

End: 1378139

Strand: Reverse

Name: ylxR [H]

Synonym: TTE1395

Alternate gene names: 20807842

Gene position: 1378139-1377867 (Counterclockwise)

Preceding gene: 20807843

Following gene: 20807841

Centisome position: 51.24

GC content: 41.03

Gene sequence:

>273_bases
ATGAAAGTAAAAAAAGTTCCGATGAGAATGTGCCTTGGCTGCCAAGAGATGAAGCCTAAAAAAGAGCTTATACGGATAGT
AAGACGCGCACAGGACTTTTTAGTTCAAATAGACCCAACAGGTAAAGTGGCAGGAAGAGGTGCCTATATATGCAGGGATG
TAAACTGCCTTGAAAAGGCTTTTAAGCATAAAAGGCTTGAGAAGGCGCTGGAAGTCCCTATATCACAAGAAATATACGAA
CAATTGAAGAGGGAGATAATGGATGAGGAATGA

Upstream 100 bases:

>100_bases
GGTAAAGAGGGGCAGAATGCGCGGCTAGCAGCGAAGCTCACTGGATGGAAGATAGATATAAAAAGCGAGTCGATGGTCAA
AAGTTGAGTGAGGTGGAAAA

Downstream 100 bases:

>100_bases
CAGATTTCACTCTATACTCGGTTTGGCAAAAAAGGCGGGTAAATTGGTTTCAGGCAGTTACAGTGTAGAAAAATATTTAA
AAACCAGAAAAGTTTTTTTG

Product: nucleic-acid-binding protein implicated in transcription termination

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKVKKVPMRMCLGCQEMKPKKELIRIVRRAQDFLVQIDPTGKVAGRGAYICRDVNCLEKAFKHKRLEKALEVPISQEIYE
QLKREIMDEE

Sequences:

>Translated_90_residues
MKVKKVPMRMCLGCQEMKPKKELIRIVRRAQDFLVQIDPTGKVAGRGAYICRDVNCLEKAFKHKRLEKALEVPISQEIYE
QLKREIMDEE
>Mature_90_residues
MKVKKVPMRMCLGCQEMKPKKELIRIVRRAQDFLVQIDPTGKVAGRGAYICRDVNCLEKAFKHKRLEKALEVPISQEIYE
QLKREIMDEE

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 10577; Mature: 10577

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKKVPMRMCLGCQEMKPKKELIRIVRRAQDFLVQIDPTGKVAGRGAYICRDVNCLEKA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHCHHHHHHH
FKHKRLEKALEVPISQEIYEQLKREIMDEE
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVKKVPMRMCLGCQEMKPKKELIRIVRRAQDFLVQIDPTGKVAGRGAYICRDVNCLEKA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHCHHHHHHH
FKHKRLEKALEVPISQEIYEQLKREIMDEE
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]