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The map label for this gene is LytE2

Identifier: 20807784

GI number: 20807784

Start: 1322069

End: 1322626

Strand: Direct

Name: LytE2

Synonym: TTE1337

Alternate gene names: NA

Gene position: 1322069-1322626 (Clockwise)

Preceding gene: 20807783

Following gene: 20807785

Centisome position: 49.16

GC content: 42.83

Gene sequence:

>558_bases
ATGACAATAGATGGATACACCCCTTATTACCCGCATCATCCTCACCCCGAACATTGCAGGAGTTTTTATACCGTGCAGCC
CGGGGATTCGATGTGGTCCATTGCAAATAAATTCGGAATAAGCCTTGATTGTTTAATTAAGGCAAATCCCCAAATAAGAG
ACCCAAATTTGATATATCCTGGACAGCAGATTTGCATACCTTTCTATTGTCCACCCGTCTCCTATGAACAGTGCAGGACA
ATTTACACGGTAAGGCCTGGGGATTCTCTGTGGTCAATAGCTAACATGTTTGGGGTGAGTTTAGATTGCCTTATCAAGGC
GAATCCGCAAATATCTGACCCAAATTTAATATATCCTGGGCAGCAAATTTGCATACCTTTCTACTGCCCACCGCCGTCTC
CTCAAACCTGCAGAACTATATACACTGCTAAAGCAGGTGATAGTCTGTGGTCAATCGCCAACATGTTTGGAGTAAGTTTA
GAGGCTTTAATCAAGGCAAATCCTCAAATTCCAGACCCTAACTTGATATATCCAGGACAACAGATATGTATTCCGTAA

Upstream 100 bases:

>100_bases
CATGACATATCCTGTTTGATTTGTATTTTGGCTTCCCTCCTGTAACACATCTTTTCATAATTCATAACATGTATTAGAAA
GTTTAAAGGAGGGAAGCCTA

Downstream 100 bases:

>100_bases
AAGGGCGCCTTTGTGCGCCTTTTTATTTTATTGCCTCTTTTTTCAGTTTATAATAAAATGGATATGATACAAAAGATTTG
GAGGAGATGAAAAATGGGAA

Product: LysM repeat-containing protein

Products: NA

Alternate protein names: 1,4-beta-N-acetylmuramoylhydrolase; Lysozyme; Peptidoglycan hydrolase; Pg-hydrolase 2 [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTIDGYTPYYPHHPHPEHCRSFYTVQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYPGQQICIPFYCPPVSYEQCRT
IYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICIPFYCPPPSPQTCRTIYTAKAGDSLWSIANMFGVSL
EALIKANPQIPDPNLIYPGQQICIP

Sequences:

>Translated_185_residues
MTIDGYTPYYPHHPHPEHCRSFYTVQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYPGQQICIPFYCPPVSYEQCRT
IYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICIPFYCPPPSPQTCRTIYTAKAGDSLWSIANMFGVSL
EALIKANPQIPDPNLIYPGQQICIP
>Mature_184_residues
TIDGYTPYYPHHPHPEHCRSFYTVQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYPGQQICIPFYCPPVSYEQCRTI
YTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICIPFYCPPPSPQTCRTIYTAKAGDSLWSIANMFGVSLE
ALIKANPQIPDPNLIYPGQQICIP

Specific function: May work in concert with and potentiate the processive hydrolytic action of muramidase-1, which requires binding of the enzyme to non-reducing ends of glycan chains. Hydrolysis in the midst of glycan chains would increase the number of binding sites for m

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013338
- InterPro:   IPR002901
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01832 Glucosaminidase; PF01476 LysM [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 20741; Mature: 20610

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDGYTPYYPHHPHPEHCRSFYTVQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYP
CCCCCCCCCCCCCCCHHHHCEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEECC
GQQICIPFYCPPVSYEQCRTIYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPG
CCEEEEEEECCCCCHHHCEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEEECC
QQICIPFYCPPPSPQTCRTIYTAKAGDSLWSIANMFGVSLEALIKANPQIPDPNLIYPGQ
CEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEHEECCCCCCCCCEECCCC
QICIP
EEECC
>Mature Secondary Structure 
TIDGYTPYYPHHPHPEHCRSFYTVQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYP
CCCCCCCCCCCCCCHHHHCEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEECC
GQQICIPFYCPPVSYEQCRTIYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPG
CCEEEEEEECCCCCHHHCEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEEECC
QQICIPFYCPPPSPQTCRTIYTAKAGDSLWSIANMFGVSLEALIKANPQIPDPNLIYPGQ
CEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEHEECCCCCCCCCEECCCC
QICIP
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1347040; 2753858 [H]