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The map label for this gene is UbiB3 [H]

Identifier: 20807778

GI number: 20807778

Start: 1315427

End: 1316407

Strand: Direct

Name: UbiB3 [H]

Synonym: TTE1329

Alternate gene names: 20807778

Gene position: 1315427-1316407 (Clockwise)

Preceding gene: 20807777

Following gene: 20807779

Centisome position: 48.91

GC content: 39.14

Gene sequence:

>981_bases
GTGAACAAATTGGCAAATAGGCTGGAATGCGTAGATGCAGGGACAGAATATTGCCCCTGCTACTTGGCTGAACTTAATGA
ATGCATAGTGTGCTCTCAACTTCAGGGAAAGAAATTTTGCGATTGCAATTGGAGGGGTGTATGCATTTTTCAGGAATTTG
TGTGGGCTGGTTACAAGGCAAAGGCCACTAGGAGTACCGTTTTTTCTAAAGTTGTAAAGAGGGAAGAGATAAACGACGAG
GTGATAGTTCTTACTCTCAAAGTGCCCAATAAAATGGCTAGGGACCTGAATGAACCTGGTTCTTTTGTTTTTATAAGAGG
CTATTTGAGTCCTTCTTTTTTCGACACACCTATGTCTGTAATGTGGGCAGACGAGGTGGAGGGAATTATTAAGATAGCTG
TTCAGGTAACTGGACCTAAGACAAAGCTTATTGCTAACGCGAAAGAGGGGCAAGAGGTGTACATAAGAGGACCTTACTGG
AATGGGATGTTTGGTCACAGGTACATAAAAGGGACACATAATTCTAAGGCTTTAGTAGTTTTAAGAGGGATTGCTCAAGC
ACCTGGAGTGATTGTAATCTTAAAACTAATTCAAAATAAAAACAAAGTCATCGTACTTTTGGATAAAGGAAAAGTTAAGG
CCAATTTTATAAAAGAGTACCTTGAAAAATTTGACATAACTTTTATAGAGACAGACCTTTTAACAGAAGAAGGGCAGAGG
ATTCTAAAAGAATTCATAAAGGACAAAGAGATCACTGTTGTCTACAGCGGAGGGTCTGATGAACAGCATCTAAACATTTT
AGAGTATTTAGATACATACAACAGTGAAGCGTATTTAGCTGTGTCTAATAATAACAAGATATGCTGCGGAGAAGGGATAT
GTGGGAGCTGTGAAATTGAAATAGAGGGACAAAAGATGAGAACCTGTAAAGTCCAGGTAGATATAAGAAAAGCATTGGAA
AGGAAGATGCTGCGTGGTTAA

Upstream 100 bases:

>100_bases
GTGGATTGAAATTTTTAACCCCTCTTGACTTTTCAAGAGGGGTTTTATTTTGTAATAGTTTTGAACCTCCGAGAATATTT
TATTAATGTAAAAATCGGAG

Downstream 100 bases:

>100_bases
AGTGGTGGTCATTGGTGGAGGATGGGCAGGATGTGCTGCTGCCTTGGCGGCGAGGAAAGCCGGTGCAGAGGTTGTGTTAT
TAGAAAAAACTGACATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNKLANRLECVDAGTEYCPCYLAELNECIVCSQLQGKKFCDCNWRGVCIFQEFVWAGYKAKATRSTVFSKVVKREEINDE
VIVLTLKVPNKMARDLNEPGSFVFIRGYLSPSFFDTPMSVMWADEVEGIIKIAVQVTGPKTKLIANAKEGQEVYIRGPYW
NGMFGHRYIKGTHNSKALVVLRGIAQAPGVIVILKLIQNKNKVIVLLDKGKVKANFIKEYLEKFDITFIETDLLTEEGQR
ILKEFIKDKEITVVYSGGSDEQHLNILEYLDTYNSEAYLAVSNNNKICCGEGICGSCEIEIEGQKMRTCKVQVDIRKALE
RKMLRG

Sequences:

>Translated_326_residues
MNKLANRLECVDAGTEYCPCYLAELNECIVCSQLQGKKFCDCNWRGVCIFQEFVWAGYKAKATRSTVFSKVVKREEINDE
VIVLTLKVPNKMARDLNEPGSFVFIRGYLSPSFFDTPMSVMWADEVEGIIKIAVQVTGPKTKLIANAKEGQEVYIRGPYW
NGMFGHRYIKGTHNSKALVVLRGIAQAPGVIVILKLIQNKNKVIVLLDKGKVKANFIKEYLEKFDITFIETDLLTEEGQR
ILKEFIKDKEITVVYSGGSDEQHLNILEYLDTYNSEAYLAVSNNNKICCGEGICGSCEIEIEGQKMRTCKVQVDIRKALE
RKMLRG
>Mature_326_residues
MNKLANRLECVDAGTEYCPCYLAELNECIVCSQLQGKKFCDCNWRGVCIFQEFVWAGYKAKATRSTVFSKVVKREEINDE
VIVLTLKVPNKMARDLNEPGSFVFIRGYLSPSFFDTPMSVMWADEVEGIIKIAVQVTGPKTKLIANAKEGQEVYIRGPYW
NGMFGHRYIKGTHNSKALVVLRGIAQAPGVIVILKLIQNKNKVIVLLDKGKVKANFIKEYLEKFDITFIETDLLTEEGQR
ILKEFIKDKEITVVYSGGSDEQHLNILEYLDTYNSEAYLAVSNNNKICCGEGICGSCEIEIEGQKMRTCKVQVDIRKALE
RKMLRG

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 36899; Mature: 36899

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLANRLECVDAGTEYCPCYLAELNECIVCSQLQGKKFCDCNWRGVCIFQEFVWAGYKA
CCHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCC
KATRSTVFSKVVKREEINDEVIVLTLKVPNKMARDLNEPGSFVFIRGYLSPSFFDTPMSV
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCE
MWADEVEGIIKIAVQVTGPKTKLIANAKEGQEVYIRGPYWNGMFGHRYIKGTHNSKALVV
EEHHHHCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCEEEE
LRGIAQAPGVIVILKLIQNKNKVIVLLDKGKVKANFIKEYLEKFDITFIETDLLTEEGQR
EECCCCCCCCEEEEEHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHH
ILKEFIKDKEITVVYSGGSDEQHLNILEYLDTYNSEAYLAVSNNNKICCGEGICGSCEIE
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEEEE
IEGQKMRTCKVQVDIRKALERKMLRG
ECCCEEEEEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MNKLANRLECVDAGTEYCPCYLAELNECIVCSQLQGKKFCDCNWRGVCIFQEFVWAGYKA
CCHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCC
KATRSTVFSKVVKREEINDEVIVLTLKVPNKMARDLNEPGSFVFIRGYLSPSFFDTPMSV
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCE
MWADEVEGIIKIAVQVTGPKTKLIANAKEGQEVYIRGPYWNGMFGHRYIKGTHNSKALVV
EEHHHHCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCEEEE
LRGIAQAPGVIVILKLIQNKNKVIVLLDKGKVKANFIKEYLEKFDITFIETDLLTEEGQR
EECCCCCCCCEEEEEHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHH
ILKEFIKDKEITVVYSGGSDEQHLNILEYLDTYNSEAYLAVSNNNKICCGEGICGSCEIE
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEEEE
IEGQKMRTCKVQVDIRKALERKMLRG
ECCCEEEEEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]