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The map label for this gene is scpA

Identifier: 20807773

GI number: 20807773

Start: 1311857

End: 1312600

Strand: Direct

Name: scpA

Synonym: TTE1324

Alternate gene names: 20807773

Gene position: 1311857-1312600 (Clockwise)

Preceding gene: 20807772

Following gene: 20807774

Centisome position: 48.78

GC content: 34.14

Gene sequence:

>744_bases
ATGTACACAGTAAAACTAGAAATTTTTGAAGGACCTTTTGATCTTTTGTTTCATTTGATTGAAAAAAACGAAATAGATTT
GATGGACATTCCCATATCTATAATATTAGACCAATATATGGAGTACATAAGAAGTCTGCAAGAAATGGACCTTGACGTAG
CTTCGGAATTTATAGTGATGGCTGCTACGCTGGTGGAAATCAAGTCGAGGATGCTTCTACCGAAATTTAGATTGGAAGAA
GAAGCAGAAAAAATAGAAGAGGACCCGAGAGAAGAACTTGTAAAGCAACTTATAGAGTACAAAAAATACAAAGAAATTGC
GCAGCTTTTAAGCGGAATTTGCGGGATAAACCGCAGGTTTTTTAAAGAGGAGCCAGATTTAAATTATATAGACAAAAGAG
TAGCTTTAAACTATTCGGTTGAAGATATAGTAAATGTGTACAGAAAAATTCTTGAAAGAAATAAAGAAAAAGAAAATAAA
ATTGAGATAAAGAAGGAAGAATATACAGTAGTAAGCAAAATTAAAGAACTGCTGACCTATCTTGTGAAAAAGCCTGCTCT
ATGGTTTAGTGAAATTGTAAGAAAAAGTAGAAGCAAGTTAGAAGTGGTGGTATCTTTTGTTGCCCTTTTAGAGCTCATAA
AACTAAACAGAGTAGCGGCAGAGCAGCAAACAGCTTATGGGGATATATTTATTAGATTTTTAGGAAGAGAAGGGAGAAAA
CATGACCCAGGAAGGCAAGATTGA

Upstream 100 bases:

>100_bases
TCTTAGTATTTACAGGAATTATTGGCAAAGTTATGTGGCCTCTCATAAACGGACTTGACTATTTCATAACTCTCTTACTA
AAACCTTTTGGGGTGTAGAA

Downstream 100 bases:

>100_bases
AGCTATCCTCTTTGCAGCAGGACAAGCAGTAAAAATAAGGACTCTTGCAGAAGCATTAGAAGTTACTGAAGAAGAAGTAA
GGGAGTTGCTTAAAAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MYTVKLEIFEGPFDLLFHLIEKNEIDLMDIPISIILDQYMEYIRSLQEMDLDVASEFIVMAATLVEIKSRMLLPKFRLEE
EAEKIEEDPREELVKQLIEYKKYKEIAQLLSGICGINRRFFKEEPDLNYIDKRVALNYSVEDIVNVYRKILERNKEKENK
IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSRSKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIRFLGREGRK
HDPGRQD

Sequences:

>Translated_247_residues
MYTVKLEIFEGPFDLLFHLIEKNEIDLMDIPISIILDQYMEYIRSLQEMDLDVASEFIVMAATLVEIKSRMLLPKFRLEE
EAEKIEEDPREELVKQLIEYKKYKEIAQLLSGICGINRRFFKEEPDLNYIDKRVALNYSVEDIVNVYRKILERNKEKENK
IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSRSKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIRFLGREGRK
HDPGRQD
>Mature_247_residues
MYTVKLEIFEGPFDLLFHLIEKNEIDLMDIPISIILDQYMEYIRSLQEMDLDVASEFIVMAATLVEIKSRMLLPKFRLEE
EAEKIEEDPREELVKQLIEYKKYKEIAQLLSGICGINRRFFKEEPDLNYIDKRVALNYSVEDIVNVYRKILERNKEKENK
IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSRSKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIRFLGREGRK
HDPGRQD

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_THETN (Q8RAA1)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_622944.1
- GeneID:   997710
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1324
- NMPDR:   fig|273068.3.peg.1264
- HOGENOM:   HBG728383
- OMA:   YLLKINI
- ProtClustDB:   CLSK901173
- BioCyc:   TTEN273068:TTE1324-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29273; Mature: 29273

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTVKLEIFEGPFDLLFHLIEKNEIDLMDIPISIILDQYMEYIRSLQEMDLDVASEFIVM
CEEEEEEEECCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AATLVEIKSRMLLPKFRLEEEAEKIEEDPREELVKQLIEYKKYKEIAQLLSGICGINRRF
HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FKEEPDLNYIDKRVALNYSVEDIVNVYRKILERNKEKENKIEIKKEEYTVVSKIKELLTY
HCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVKKPALWFSEIVRKSRSKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIRFLGREGRK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HDPGRQD
CCCCCCC
>Mature Secondary Structure
MYTVKLEIFEGPFDLLFHLIEKNEIDLMDIPISIILDQYMEYIRSLQEMDLDVASEFIVM
CEEEEEEEECCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AATLVEIKSRMLLPKFRLEEEAEKIEEDPREELVKQLIEYKKYKEIAQLLSGICGINRRF
HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FKEEPDLNYIDKRVALNYSVEDIVNVYRKILERNKEKENKIEIKKEEYTVVSKIKELLTY
HCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVKKPALWFSEIVRKSRSKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIRFLGREGRK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HDPGRQD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336