Click here to switch to the map view.

The map label for this gene is yrrL [H]

Identifier: 20807704

GI number: 20807704

Start: 1255007

End: 1256053

Strand: Direct

Name: yrrL [H]

Synonym: TTE1255

Alternate gene names: 20807704

Gene position: 1255007-1256053 (Clockwise)

Preceding gene: 20807703

Following gene: 20807705

Centisome position: 46.66

GC content: 35.15

Gene sequence:

>1047_bases
ATGAATAAAGTCGAAACAAAAGGTAAAAGCAAATTTTTTATACTTGTGATAGTTTTAATTTTTCTTTTTGTTTCTGCTTC
TTTTTATTATCAAAGCCTTTTTAAGCCTGTGTCTACAAGGGCATCAGAGGAAGTGGTTGTGAATATACCCAGTGGCTATT
CTACTCACCAGATAGCAAAGCTTTTGAAAGAAAAAAATTTGATTAAAAATGAGTGGTTTTTTGTATGGCGGGCAAAAATA
TTAAAAGCAGATGGTAAGCTGAAGGCTGGAAAATATTTATTAAGTCAGAATATGACAGTTGACCAGATTATTGAAAAAAT
AGCAGCAGGAAAATCTGAAATGGATGTTTTTAAAGTCACAATTCCCGAAGGGTATACTGTTAAAGATATAGCGAAAAAAT
TGGCTCAAATAGGGCTTGTCGATGAGAAAAAATTTTTAGAAGTAGCGCAGAATGGCGATTTTGAATATAGTTTCTTAAAA
AACATACCGAGAGATAGGCCCAATAGATTAGAAGGTTACCTTTTCCCCGATACCTATTTTATTCCTGTAAATGCTGACGA
AAAAGAGATAATAAACATGATGTTAAAAAGGTTTGAAGAAGTGTACAACACTGTAATCAAAGACAACGCTCAAAGAATGG
GGATGACTCCCGATGAGATTGTGATTGTTGCATCAATTGTAGAAAAAGAAGCTGTGTTGGACAGGGAAAGGTCTATTATC
GCAGGAGTTATTTACAACAGGCTGAAGAAAAAGATGAAGCTGGAGCTTTGTCCTACTGTTGAATACGCTTTAGGAACTCA
TAAGGAAGTGCTTTCATATCAGGACTTAAAAGTCGATTCTCCTTATAATACCTATGAACATTACGGGCTTCCTATTGGAC
CTATTTGCAATCCCGGACTTAAATCCATTGAGGCTGCTTTAAATCCTTCTAAACATGACTATTATTATTTTGTGGCCAGA
GGAGATGGAACACACATCTTTAGCAGAACTTATCAGGAGCATTTAAAAGCTCAAAGAGAAGTGGAAAGGGAGCAAAATAA
AAAGTGA

Upstream 100 bases:

>100_bases
AGACAGATACTCACTGTGACAAGTAAGCTTTTAGGCTTACTTGTTTTTATTTTCAATTAATTGTATAATTTATGTATACC
CCTCTAAGGAGAGAAATAAG

Downstream 100 bases:

>100_bases
AGGGTTGAGGCGATGGAGATAACCTATCGTGATATACAGTTTATAAGGTCTTTTCACGAGGAGTTGTATGAAGACTTAAA
GCCATTGAGAAAATTTGCAG

Product: periplasmic solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MNKVETKGKSKFFILVIVLIFLFVSASFYYQSLFKPVSTRASEEVVVNIPSGYSTHQIAKLLKEKNLIKNEWFFVWRAKI
LKADGKLKAGKYLLSQNMTVDQIIEKIAAGKSEMDVFKVTIPEGYTVKDIAKKLAQIGLVDEKKFLEVAQNGDFEYSFLK
NIPRDRPNRLEGYLFPDTYFIPVNADEKEIINMMLKRFEEVYNTVIKDNAQRMGMTPDEIVIVASIVEKEAVLDRERSII
AGVIYNRLKKKMKLELCPTVEYALGTHKEVLSYQDLKVDSPYNTYEHYGLPIGPICNPGLKSIEAALNPSKHDYYYFVAR
GDGTHIFSRTYQEHLKAQREVEREQNKK

Sequences:

>Translated_348_residues
MNKVETKGKSKFFILVIVLIFLFVSASFYYQSLFKPVSTRASEEVVVNIPSGYSTHQIAKLLKEKNLIKNEWFFVWRAKI
LKADGKLKAGKYLLSQNMTVDQIIEKIAAGKSEMDVFKVTIPEGYTVKDIAKKLAQIGLVDEKKFLEVAQNGDFEYSFLK
NIPRDRPNRLEGYLFPDTYFIPVNADEKEIINMMLKRFEEVYNTVIKDNAQRMGMTPDEIVIVASIVEKEAVLDRERSII
AGVIYNRLKKKMKLELCPTVEYALGTHKEVLSYQDLKVDSPYNTYEHYGLPIGPICNPGLKSIEAALNPSKHDYYYFVAR
GDGTHIFSRTYQEHLKAQREVEREQNKK
>Mature_348_residues
MNKVETKGKSKFFILVIVLIFLFVSASFYYQSLFKPVSTRASEEVVVNIPSGYSTHQIAKLLKEKNLIKNEWFFVWRAKI
LKADGKLKAGKYLLSQNMTVDQIIEKIAAGKSEMDVFKVTIPEGYTVKDIAKKLAQIGLVDEKKFLEVAQNGDFEYSFLK
NIPRDRPNRLEGYLFPDTYFIPVNADEKEIINMMLKRFEEVYNTVIKDNAQRMGMTPDEIVIVASIVEKEAVLDRERSII
AGVIYNRLKKKMKLELCPTVEYALGTHKEVLSYQDLKVDSPYNTYEHYGLPIGPICNPGLKSIEAALNPSKHDYYYFVAR
GDGTHIFSRTYQEHLKAQREVEREQNKK

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=315, Percent_Identity=29.2063492063492, Blast_Score=135, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 40095; Mature: 40095

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVETKGKSKFFILVIVLIFLFVSASFYYQSLFKPVSTRASEEVVVNIPSGYSTHQIAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
LLKEKNLIKNEWFFVWRAKILKADGKLKAGKYLLSQNMTVDQIIEKIAAGKSEMDVFKVT
HHHHCCCHHHHHHHEEEHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEE
IPEGYTVKDIAKKLAQIGLVDEKKFLEVAQNGDFEYSFLKNIPRDRPNRLEGYLFPDTYF
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCEECCCEEE
IPVNADEKEIINMMLKRFEEVYNTVIKDNAQRMGMTPDEIVIVASIVEKEAVLDRERSII
EECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHH
AGVIYNRLKKKMKLELCPTVEYALGTHKEVLSYQDLKVDSPYNTYEHYGLPIGPICNPGL
HHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHH
KSIEAALNPSKHDYYYFVARGDGTHIFSRTYQEHLKAQREVEREQNKK
HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKVETKGKSKFFILVIVLIFLFVSASFYYQSLFKPVSTRASEEVVVNIPSGYSTHQIAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
LLKEKNLIKNEWFFVWRAKILKADGKLKAGKYLLSQNMTVDQIIEKIAAGKSEMDVFKVT
HHHHCCCHHHHHHHEEEHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEE
IPEGYTVKDIAKKLAQIGLVDEKKFLEVAQNGDFEYSFLKNIPRDRPNRLEGYLFPDTYF
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCEECCCEEE
IPVNADEKEIINMMLKRFEEVYNTVIKDNAQRMGMTPDEIVIVASIVEKEAVLDRERSII
EECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHH
AGVIYNRLKKKMKLELCPTVEYALGTHKEVLSYQDLKVDSPYNTYEHYGLPIGPICNPGL
HHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHH
KSIEAALNPSKHDYYYFVARGDGTHIFSRTYQEHLKAQREVEREQNKK
HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]