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The map label for this gene is 20807613

Identifier: 20807613

GI number: 20807613

Start: 1157624

End: 1158667

Strand: Direct

Name: 20807613

Synonym: TTE1156

Alternate gene names: NA

Gene position: 1157624-1158667 (Clockwise)

Preceding gene: 20807612

Following gene: 20807614

Centisome position: 43.04

GC content: 39.46

Gene sequence:

>1044_bases
ATGCTAGGGAGTGGGTCTATTATCATGATACATGAACTCAGAGCAAAAGGCAAGAGTATTCGTGCAATTTCACGAGAAAC
AGGGCATTCTCGAAACACAATAAGAAAGTATCTCAGAGCAGAGGGAATCCCCGAAAGAAAACCTCGCCCTAAGAGAGGTT
CAAAACTTGACCCTTACAAAGATACTATTCATGAGTACATTAATATGGGAATATTTAATTGTGAAGTTATTTACGAAAGA
ATAAAAGAAGAAGGTTACACTGGAGGAAAGACTATTTTAAGAGACTATGTAAGGCAGTTTAGACCTTCAAAGCATATTCA
GGCTGTATGCCGCTATGAAACAAAGTCTGGAGAACAAGCCCAGGTTGATTGGGGTGAATACAATTACATTGATCAGGAAA
CAGGAGAAGTAAGAAAGCTCTATCTCTTTGTCATGGTACTTGGTTATTCAAGAGCAATGTATGTGGAATTCACAAATCGC
TGTGATGTTCACACTTTCAATCGCTGCCTTATCCATGGTTTTGAATATTTTGGTGGAGTAACTGACGTTGTACTTACTGA
CAGAATGAAAACTGTAATCATAGGTACAGATGCAAACAAGAAGCCCATATGGAATGCAGTATTTGAGGACCTTGCAGCAA
CTTTGGGATTTGTACCCAGAGTTTGCAAAGTTAGACGCCCCCAGACAAAAGGCAAAGTAGAAAGCGGAATAGACTTTGTC
AAGGACAATTTTCTGCCCGGGAGAAGATTTTTAGATTATGGCGACTTAAATCGTCAGGCAGTAGAGTGGTGTGAGAAGAA
GAACAGAAGAGTACATGGTACTACAGGAGAAAGACCAATTGACAGACTAAAGAGGGAAAACTTAAAGCCTTTGCCTTCAT
TGGATAAATATCAAAAATTTCTGGAGGAACCAAGGAAGGTACATAAAGATGGCCTTTTGAGTTATGATGGTGTAAGGTAT
GGAGTACCATGGCAGTACAGCGGGAAAGAGGTAGTTGTAAGAGAAAAAATGGCAAAATTGAAATTCTCTACGATAGCAAG
GTAA

Upstream 100 bases:

>100_bases
TATAATTGACCCAGGGGTAACGAGAAGGAATTGACCCACCCCCTGTCGAAATATCCCTCTGATCTGAATTAAACCTCAGA
GGATCGGAGGGAGATAAAAA

Downstream 100 bases:

>100_bases
TAGCAGTACATGACAAACGTTATCGTTCAAGAAGCACAGTTTTTCTCAAAGACCAGTACAAAGGCTTAAAAGCGGCAGAA
GGGATGCTTTATCCCAGACC

Product: integrase core subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLGSGSIIMIHELRAKGKSIRAISRETGHSRNTIRKYLRAEGIPERKPRPKRGSKLDPYKDTIHEYINMGIFNCEVIYER
IKEEGYTGGKTILRDYVRQFRPSKHIQAVCRYETKSGEQAQVDWGEYNYIDQETGEVRKLYLFVMVLGYSRAMYVEFTNR
CDVHTFNRCLIHGFEYFGGVTDVVLTDRMKTVIIGTDANKKPIWNAVFEDLAATLGFVPRVCKVRRPQTKGKVESGIDFV
KDNFLPGRRFLDYGDLNRQAVEWCEKKNRRVHGTTGERPIDRLKRENLKPLPSLDKYQKFLEEPRKVHKDGLLSYDGVRY
GVPWQYSGKEVVVREKMAKLKFSTIAR

Sequences:

>Translated_347_residues
MLGSGSIIMIHELRAKGKSIRAISRETGHSRNTIRKYLRAEGIPERKPRPKRGSKLDPYKDTIHEYINMGIFNCEVIYER
IKEEGYTGGKTILRDYVRQFRPSKHIQAVCRYETKSGEQAQVDWGEYNYIDQETGEVRKLYLFVMVLGYSRAMYVEFTNR
CDVHTFNRCLIHGFEYFGGVTDVVLTDRMKTVIIGTDANKKPIWNAVFEDLAATLGFVPRVCKVRRPQTKGKVESGIDFV
KDNFLPGRRFLDYGDLNRQAVEWCEKKNRRVHGTTGERPIDRLKRENLKPLPSLDKYQKFLEEPRKVHKDGLLSYDGVRY
GVPWQYSGKEVVVREKMAKLKFSTIAR
>Mature_347_residues
MLGSGSIIMIHELRAKGKSIRAISRETGHSRNTIRKYLRAEGIPERKPRPKRGSKLDPYKDTIHEYINMGIFNCEVIYER
IKEEGYTGGKTILRDYVRQFRPSKHIQAVCRYETKSGEQAQVDWGEYNYIDQETGEVRKLYLFVMVLGYSRAMYVEFTNR
CDVHTFNRCLIHGFEYFGGVTDVVLTDRMKTVIIGTDANKKPIWNAVFEDLAATLGFVPRVCKVRRPQTKGKVESGIDFV
KDNFLPGRRFLDYGDLNRQAVEWCEKKNRRVHGTTGERPIDRLKRENLKPLPSLDKYQKFLEEPRKVHKDGLLSYDGVRY
GVPWQYSGKEVVVREKMAKLKFSTIAR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR006120
- InterPro:   IPR012337 [H]

Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 40376; Mature: 40376

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSGSIIMIHELRAKGKSIRAISRETGHSRNTIRKYLRAEGIPERKPRPKRGSKLDPYK
CCCCCCEEEEEEHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
DTIHEYINMGIFNCEVIYERIKEEGYTGGKTILRDYVRQFRPSKHIQAVCRYETKSGEQA
HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
QVDWGEYNYIDQETGEVRKLYLFVMVLGYSRAMYVEFTNRCDVHTFNRCLIHGFEYFGGV
EECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCH
TDVVLTDRMKTVIIGTDANKKPIWNAVFEDLAATLGFVPRVCKVRRPQTKGKVESGIDFV
HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KDNFLPGRRFLDYGDLNRQAVEWCEKKNRRVHGTTGERPIDRLKRENLKPLPSLDKYQKF
HHCCCCCCHHCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHCCCCCCCCHHHHHHH
LEEPRKVHKDGLLSYDGVRYGVPWQYSGKEVVVREKMAKLKFSTIAR
HHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGSGSIIMIHELRAKGKSIRAISRETGHSRNTIRKYLRAEGIPERKPRPKRGSKLDPYK
CCCCCCEEEEEEHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
DTIHEYINMGIFNCEVIYERIKEEGYTGGKTILRDYVRQFRPSKHIQAVCRYETKSGEQA
HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
QVDWGEYNYIDQETGEVRKLYLFVMVLGYSRAMYVEFTNRCDVHTFNRCLIHGFEYFGGV
EECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCH
TDVVLTDRMKTVIIGTDANKKPIWNAVFEDLAATLGFVPRVCKVRRPQTKGKVESGIDFV
HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KDNFLPGRRFLDYGDLNRQAVEWCEKKNRRVHGTTGERPIDRLKRENLKPLPSLDKYQKF
HHCCCCCCHHCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHCCCCCCCCHHHHHHH
LEEPRKVHKDGLLSYDGVRYGVPWQYSGKEVVVREKMAKLKFSTIAR
HHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]