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The map label for this gene is pqqE [H]

Identifier: 20807610

GI number: 20807610

Start: 1154429

End: 1155862

Strand: Direct

Name: pqqE [H]

Synonym: TTE1153

Alternate gene names: 20807610

Gene position: 1154429-1155862 (Clockwise)

Preceding gene: 20807609

Following gene: 20807611

Centisome position: 42.92

GC content: 39.05

Gene sequence:

>1434_bases
TTGACGCTACCTATTTTGATAATTCGAGGTAAGTTCTTAAACTTACACTCTGTATTTTATCAGGAGGTACTTATTTTTTC
AAAGTCCATTCTCCCTTATTTTTTATTCATTACAGGAATGCTCCATTGTAACTTTTGCTACAACACCGAAAGAAAATTAT
ATCCAACCGAAACACGAGATCTAATTGAAACAATACTTGACAATGTAGTAGAATTGAAACCACTACATCTAGGCATTGGA
GGAGGCGATCCATTGTTAAGTCCGTACATTAGCTGGATATTGCAGCAGTTAGCGGAACGAATGGGGGATGAAATGCCGAT
TATTACAATTGATACTATGATGGTAAACCAACGTGAAGATGTTGTACAACAGGTCTGGCGACTCAACAAGGACCTTGGAG
ATAATAGGATACAGTTTTATCTAAGCATCCACGGGAGCCCTGAAGTTCATGACAAAATTGTCGGATATAAAGGACACTTT
AAGGAACAAATTGAAGGTATCAAATTGTTAAAGCGATATGGGATTAACTTCAGCTTGGGTATTGTACCGACAAAGGAAAA
CTTTAATCAGCTTGACACAGTACTTATATTGGCTTTGTACTGGGGGGCTGGATTACTAAACATTTCCCAATTTGTTCCTA
TTGGCAAAGGTGCAAAGGCATATGAGCAAAATCTGAGTTCCGAACAATATAAATGGCTTCTGGATTGGATTATGACACGT
AATACCCAATTAGGCTACCGATATATAGTGACTCATGAGCACTGGATAGCAGCTGTTGATCGGGAACTGCTTATGAATAG
TCTTTTTATTGGTTGCAGCGCGGGGATTTACTATTTTGGAGTACGTAGTAATGGTGATGTTGTTCCTTGCCAGCTTAACT
CGTATGTGCTCGGCAATGTGTGCAACACAAGATTAACCGAAATTTGGCGAAATCATCCTGTGTTACGACGATGGAGAGAA
CGAGAGGTTGAGGGAAGATGTAGAGATTGTCCATTGGTTTTCAAATGCGGGGGTTGTCGTTGTAATGCTGTAGCATATAG
TGGAAACTTTTTAGGGGAAGATCCACTTTGTCCTTTTTCACCAGAAGAATTAATCAGAGCAATTAACTTGAATCAAGCAA
GCAAAAAAATAACTACTGAAAGGACTGATGCCTATTTGTCAGAAATAAACATTAGAAATGACACAAGAATTGTAAAACTC
GTTACACTTGCAACGTGGCAAGGAGATTCTTTGATTATCCGTAATGAGGCACGAAATACTTTCGTGGAGCTCACAGGTGA
TGCATCAACTATCTATTGTTTAATTCCATCCCAATGTGGGATTGCCTTGAATGACCTCAGGTTAGTTTTCAAGAAACAAA
CAGGAAGAGAACTCCCTCTAGGGGAACTTAGGGCATTAATTAGTTCGGGTGTTTTAGGATGTGTTATCGAATAG

Upstream 100 bases:

>100_bases
TCCCTAGGTGTCATTTTAAGTTATTGATTTAATAATCACTGATTTCTTTGCTAACTACTACCTACAATTTCTATTTTTTA
GGGAATCCTCATGTTCTTAC

Downstream 100 bases:

>100_bases
CATATTTTCTGCGGTCACGGCACTTCAAGATATGTAAGGGACGTATTTATGAAATCAAAACTTACAAAGATTCCAAGGTT
CATTGTATGATGTACAGTGG

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MTLPILIIRGKFLNLHSVFYQEVLIFSKSILPYFLFITGMLHCNFCYNTERKLYPTETRDLIETILDNVVELKPLHLGIG
GGDPLLSPYISWILQQLAERMGDEMPIITIDTMMVNQREDVVQQVWRLNKDLGDNRIQFYLSIHGSPEVHDKIVGYKGHF
KEQIEGIKLLKRYGINFSLGIVPTKENFNQLDTVLILALYWGAGLLNISQFVPIGKGAKAYEQNLSSEQYKWLLDWIMTR
NTQLGYRYIVTHEHWIAAVDRELLMNSLFIGCSAGIYYFGVRSNGDVVPCQLNSYVLGNVCNTRLTEIWRNHPVLRRWRE
REVEGRCRDCPLVFKCGGCRCNAVAYSGNFLGEDPLCPFSPEELIRAINLNQASKKITTERTDAYLSEINIRNDTRIVKL
VTLATWQGDSLIIRNEARNTFVELTGDASTIYCLIPSQCGIALNDLRLVFKKQTGRELPLGELRALISSGVLGCVIE

Sequences:

>Translated_477_residues
MTLPILIIRGKFLNLHSVFYQEVLIFSKSILPYFLFITGMLHCNFCYNTERKLYPTETRDLIETILDNVVELKPLHLGIG
GGDPLLSPYISWILQQLAERMGDEMPIITIDTMMVNQREDVVQQVWRLNKDLGDNRIQFYLSIHGSPEVHDKIVGYKGHF
KEQIEGIKLLKRYGINFSLGIVPTKENFNQLDTVLILALYWGAGLLNISQFVPIGKGAKAYEQNLSSEQYKWLLDWIMTR
NTQLGYRYIVTHEHWIAAVDRELLMNSLFIGCSAGIYYFGVRSNGDVVPCQLNSYVLGNVCNTRLTEIWRNHPVLRRWRE
REVEGRCRDCPLVFKCGGCRCNAVAYSGNFLGEDPLCPFSPEELIRAINLNQASKKITTERTDAYLSEINIRNDTRIVKL
VTLATWQGDSLIIRNEARNTFVELTGDASTIYCLIPSQCGIALNDLRLVFKKQTGRELPLGELRALISSGVLGCVIE
>Mature_476_residues
TLPILIIRGKFLNLHSVFYQEVLIFSKSILPYFLFITGMLHCNFCYNTERKLYPTETRDLIETILDNVVELKPLHLGIGG
GDPLLSPYISWILQQLAERMGDEMPIITIDTMMVNQREDVVQQVWRLNKDLGDNRIQFYLSIHGSPEVHDKIVGYKGHFK
EQIEGIKLLKRYGINFSLGIVPTKENFNQLDTVLILALYWGAGLLNISQFVPIGKGAKAYEQNLSSEQYKWLLDWIMTRN
TQLGYRYIVTHEHWIAAVDRELLMNSLFIGCSAGIYYFGVRSNGDVVPCQLNSYVLGNVCNTRLTEIWRNHPVLRRWRER
EVEGRCRDCPLVFKCGGCRCNAVAYSGNFLGEDPLCPFSPEELIRAINLNQASKKITTERTDAYLSEINIRNDTRIVKLV
TLATWQGDSLIIRNEARNTFVELTGDASTIYCLIPSQCGIALNDLRLVFKKQTGRELPLGELRALISSGVLGCVIE

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54426; Mature: 54295

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPILIIRGKFLNLHSVFYQEVLIFSKSILPYFLFITGMLHCNFCYNTERKLYPTETRD
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHH
LIETILDNVVELKPLHLGIGGGDPLLSPYISWILQQLAERMGDEMPIITIDTMMVNQRED
HHHHHHHHHHEECEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHEECCCHHH
VVQQVWRLNKDLGDNRIQFYLSIHGSPEVHDKIVGYKGHFKEQIEGIKLLKRYGINFSLG
HHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEE
IVPTKENFNQLDTVLILALYWGAGLLNISQFVPIGKGAKAYEQNLSSEQYKWLLDWIMTR
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHC
NTQLGYRYIVTHEHWIAAVDRELLMNSLFIGCSAGIYYFGVRSNGDVVPCQLNSYVLGNV
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCEEEEEECCEEECCH
CNTRLTEIWRNHPVLRRWREREVEGRCRDCPLVFKCGGCRCNAVAYSGNFLGEDPLCPFS
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCC
PEELIRAINLNQASKKITTERTDAYLSEINIRNDTRIVKLVTLATWQGDSLIIRNEARNT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEECCCCE
FVELTGDASTIYCLIPSQCGIALNDLRLVFKKQTGRELPLGELRALISSGVLGCVIE
EEEEECCCCEEEEEECCCCCCCHHHHHHEEECCCCCCCCHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
TLPILIIRGKFLNLHSVFYQEVLIFSKSILPYFLFITGMLHCNFCYNTERKLYPTETRD
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHH
LIETILDNVVELKPLHLGIGGGDPLLSPYISWILQQLAERMGDEMPIITIDTMMVNQRED
HHHHHHHHHHEECEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHEECCCHHH
VVQQVWRLNKDLGDNRIQFYLSIHGSPEVHDKIVGYKGHFKEQIEGIKLLKRYGINFSLG
HHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEE
IVPTKENFNQLDTVLILALYWGAGLLNISQFVPIGKGAKAYEQNLSSEQYKWLLDWIMTR
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHC
NTQLGYRYIVTHEHWIAAVDRELLMNSLFIGCSAGIYYFGVRSNGDVVPCQLNSYVLGNV
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCEEEEEECCEEECCH
CNTRLTEIWRNHPVLRRWREREVEGRCRDCPLVFKCGGCRCNAVAYSGNFLGEDPLCPFS
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCC
PEELIRAINLNQASKKITTERTDAYLSEINIRNDTRIVKLVTLATWQGDSLIIRNEARNT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEECCCCE
FVELTGDASTIYCLIPSQCGIALNDLRLVFKKQTGRELPLGELRALISSGVLGCVIE
EEEEECCCCEEEEEECCCCCCCHHHHHHEEECCCCCCCCHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA