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The map label for this gene is NapH [H]

Identifier: 20807564

GI number: 20807564

Start: 1097771

End: 1098772

Strand: Reverse

Name: NapH [H]

Synonym: TTE1096

Alternate gene names: 20807564

Gene position: 1098772-1097771 (Counterclockwise)

Preceding gene: 20807579

Following gene: 20807563

Centisome position: 40.85

GC content: 29.84

Gene sequence:

>1002_bases
ATGTGGAAACCAGGCCACAGTTTATCCTTGACACCAAAGAGTAAAGCAGCGCACATAGAAAAATCTGGATTTGACCGACT
AAATTTCATAAAAACATCAATTTTATATCAATTTTTTATCATCCCTTATCTTTATAGTGATATTGTGGAAATAAAATATA
AAGGAGAGATAAGAATGCATAAAAAGAAAATCCATATTAGAACCTTGATACAAATATTTTTCTTTATTTTGATTCTTTTA
ATCTCAATAAATAAAACTCTATCTGAAAAGGGCATATCTATACCATATATTCCAACTGCATCCCTTCACGCTTTATGTCC
TTTTGGTGGAGTTGTAACAATTTATCAATATCTAACAACAGGAACTTTTATCCAGAAAATACATGAATCTTCATTCGTTC
TAATGATAATAGGATTTATCATAGCTATATTATTTGGTCCTTTATTTTGTGGTTGGATTTGTCCTTTTGGAACTTTTCAA
GAATTTATAGGAAAACTGGGCAAGAAAATTTTTAAAAAACGATTTAATAATTTCGTCCCCTACAAATACGATAAATATTT
AAGATATCTACGCTATTTTGTCTTTGCTTGGGTTTTATACGCGACAATAGTAGCAGGAAAACTCATATTCCAGGACGTTG
ATCCCTATTATGCATTATTTAATTTTTGGAATGGTGAAATTGCAGTTGGAAGTATTGTGATACTATTTATTACAATTATT
TTATCACTTTTTATAGAGCGACCATGGTGCAAATATTTATGCCCTTATGGGGCAGTACTCGGCATTTTTAATTTAATTAG
GATATTCCCAATCAAGCGAAATAACAAAACATGCATAAATTGTAAAATGTGCGATCGTAATTGTCCAATGAATATAAAAG
TTTCAGAAAAAACTATAATCAGAGACCACCAGTGTATATCATGTCTTAAATGTACATCTGAGTATTCGTGCCCTATTAAC
AATACTGTAACAATTGAATCAATTATTCCTTATAAAAGTTAA

Upstream 100 bases:

>100_bases
AAAGGTATTAGATTCATTTTATGAAGAATATTCACATAAAAGTACCTTTACCATCCTGGCTAATCTTTAATAACTACAGA
AAAATCTTGGTATCAGGGAG

Downstream 100 bases:

>100_bases
TAACAAGGAGGAAGATAAATATGAAGCTTAATTCTAAAATTATAGGTATTATATTGCTTTTATTGTTATTTGGCGGAATT
GGCATCGCAAAAGCAACAAA

Product: polyferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MWKPGHSLSLTPKSKAAHIEKSGFDRLNFIKTSILYQFFIIPYLYSDIVEIKYKGEIRMHKKKIHIRTLIQIFFFILILL
ISINKTLSEKGISIPYIPTASLHALCPFGGVVTIYQYLTTGTFIQKIHESSFVLMIIGFIIAILFGPLFCGWICPFGTFQ
EFIGKLGKKIFKKRFNNFVPYKYDKYLRYLRYFVFAWVLYATIVAGKLIFQDVDPYYALFNFWNGEIAVGSIVILFITII
LSLFIERPWCKYLCPYGAVLGIFNLIRIFPIKRNNKTCINCKMCDRNCPMNIKVSEKTIIRDHQCISCLKCTSEYSCPIN
NTVTIESIIPYKS

Sequences:

>Translated_333_residues
MWKPGHSLSLTPKSKAAHIEKSGFDRLNFIKTSILYQFFIIPYLYSDIVEIKYKGEIRMHKKKIHIRTLIQIFFFILILL
ISINKTLSEKGISIPYIPTASLHALCPFGGVVTIYQYLTTGTFIQKIHESSFVLMIIGFIIAILFGPLFCGWICPFGTFQ
EFIGKLGKKIFKKRFNNFVPYKYDKYLRYLRYFVFAWVLYATIVAGKLIFQDVDPYYALFNFWNGEIAVGSIVILFITII
LSLFIERPWCKYLCPYGAVLGIFNLIRIFPIKRNNKTCINCKMCDRNCPMNIKVSEKTIIRDHQCISCLKCTSEYSCPIN
NTVTIESIIPYKS
>Mature_333_residues
MWKPGHSLSLTPKSKAAHIEKSGFDRLNFIKTSILYQFFIIPYLYSDIVEIKYKGEIRMHKKKIHIRTLIQIFFFILILL
ISINKTLSEKGISIPYIPTASLHALCPFGGVVTIYQYLTTGTFIQKIHESSFVLMIIGFIIAILFGPLFCGWICPFGTFQ
EFIGKLGKKIFKKRFNNFVPYKYDKYLRYLRYFVFAWVLYATIVAGKLIFQDVDPYYALFNFWNGEIAVGSIVILFITII
LSLFIERPWCKYLCPYGAVLGIFNLIRIFPIKRNNKTCINCKMCDRNCPMNIKVSEKTIIRDHQCISCLKCTSEYSCPIN
NTVTIESIIPYKS

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=225, Percent_Identity=31.5555555555556, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38660; Mature: 38660

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKPGHSLSLTPKSKAAHIEKSGFDRLNFIKTSILYQFFIIPYLYSDIVEIKYKGEIRMH
CCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEHH
KKKIHIRTLIQIFFFILILLISINKTLSEKGISIPYIPTASLHALCPFGGVVTIYQYLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHH
GTFIQKIHESSFVLMIIGFIIAILFGPLFCGWICPFGTFQEFIGKLGKKIFKKRFNNFVP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
YKYDKYLRYLRYFVFAWVLYATIVAGKLIFQDVDPYYALFNFWNGEIAVGSIVILFITII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHH
LSLFIERPWCKYLCPYGAVLGIFNLIRIFPIKRNNKTCINCKMCDRNCPMNIKVSEKTII
HHHHHCCCHHHHHCHHHHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCEEEECCHHHH
RDHQCISCLKCTSEYSCPINNTVTIESIIPYKS
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MWKPGHSLSLTPKSKAAHIEKSGFDRLNFIKTSILYQFFIIPYLYSDIVEIKYKGEIRMH
CCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEHH
KKKIHIRTLIQIFFFILILLISINKTLSEKGISIPYIPTASLHALCPFGGVVTIYQYLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHH
GTFIQKIHESSFVLMIIGFIIAILFGPLFCGWICPFGTFQEFIGKLGKKIFKKRFNNFVP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
YKYDKYLRYLRYFVFAWVLYATIVAGKLIFQDVDPYYALFNFWNGEIAVGSIVILFITII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHH
LSLFIERPWCKYLCPYGAVLGIFNLIRIFPIKRNNKTCINCKMCDRNCPMNIKVSEKTII
HHHHHCCCHHHHHCHHHHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCEEEECCHHHH
RDHQCISCLKCTSEYSCPINNTVTIESIIPYKS
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]