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The map label for this gene is 20807531

Identifier: 20807531

GI number: 20807531

Start: 1060434

End: 1060847

Strand: Direct

Name: 20807531

Synonym: TTE1056

Alternate gene names: NA

Gene position: 1060434-1060847 (Clockwise)

Preceding gene: 20807530

Following gene: 20807532

Centisome position: 39.43

GC content: 27.05

Gene sequence:

>414_bases
ATGCTTTTAGAAAAACTTAAATCTAATACAACTATTAATGCTCAAGAAATAGCAAAGCTTGTTGAACTTACATCAAATAC
ACAAAATAATATAGAAGCTTTAGTCAAATTAAATGCTGAAACTGCAGCAAATGTTGTAGATAAAGCAAATTTAGCATATT
CAAAATCAAAAGTAATTTTTTTAGTAGTCTCTATTTTACTTACAGCAATATCCGTAATAACGGCACTTGCAATAACAAGA
TTACTGAGAAATTCTATTAAGCAAGTCAACATTCTTGCTGAGAGATTATCAAAATATGATTTTACAGCTGAAACTGATGA
TGAGGGTAAAAACGAATTTACTGAAATGAATAGATCATTAAAAACCGTAATTGAAAATATAAAAGAAGCAATAAGAACAG
TTAAAAAAATGTAG

Upstream 100 bases:

>100_bases
ACATTTACACTGGATTTTTCAATAGCAGGAAGTTGTAAAGTGCAAAATAATATAGGTGTGTTGAGTTACTATTTATAATG
CATATATTGAAAATGCTCAG

Downstream 100 bases:

>100_bases
AAACTTTAAGAGCAAATTCAGAAAACTTATCAGCAGTATCAGAAGAATTAGCATCATCTTCGCAAGAACTAGCAAAGACT
ATACAAGAAGTCGCAGAAGG

Product: HAMP domain-containing protein

Products: NA

Alternate protein names: HAMP Domain-Containing Protein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLLEKLKSNTTINAQEIAKLVELTSNTQNNIEALVKLNAETAANVVDKANLAYSKSKVIFLVVSILLTAISVITALAITR
LLRNSIKQVNILAERLSKYDFTAETDDEGKNEFTEMNRSLKTVIENIKEAIRTVKKM

Sequences:

>Translated_137_residues
MLLEKLKSNTTINAQEIAKLVELTSNTQNNIEALVKLNAETAANVVDKANLAYSKSKVIFLVVSILLTAISVITALAITR
LLRNSIKQVNILAERLSKYDFTAETDDEGKNEFTEMNRSLKTVIENIKEAIRTVKKM
>Mature_137_residues
MLLEKLKSNTTINAQEIAKLVELTSNTQNNIEALVKLNAETAANVVDKANLAYSKSKVIFLVVSILLTAISVITALAITR
LLRNSIKQVNILAERLSKYDFTAETDDEGKNEFTEMNRSLKTVIENIKEAIRTVKKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15268; Mature: 15268

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEKLKSNTTINAQEIAKLVELTSNTQNNIEALVKLNAETAANVVDKANLAYSKSKVIF
CCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LVVSILLTAISVITALAITRLLRNSIKQVNILAERLSKYDFTAETDDEGKNEFTEMNRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
KTVIENIKEAIRTVKKM
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLEKLKSNTTINAQEIAKLVELTSNTQNNIEALVKLNAETAANVVDKANLAYSKSKVIF
CCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LVVSILLTAISVITALAITRLLRNSIKQVNILAERLSKYDFTAETDDEGKNEFTEMNRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
KTVIENIKEAIRTVKKM
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA