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The map label for this gene is LytR3 [H]

Identifier: 20807401

GI number: 20807401

Start: 924910

End: 926085

Strand: Direct

Name: LytR3 [H]

Synonym: TTE0920

Alternate gene names: 20807401

Gene position: 924910-926085 (Clockwise)

Preceding gene: 20807400

Following gene: 20807402

Centisome position: 34.39

GC content: 39.71

Gene sequence:

>1176_bases
ATGAGGAGGTTTTTTAAAATTTTCGCTCTATTTTTGGGACTTTTGGTACTCAGCTTGGGGACTGGAGCTTATATATACTT
GAAGTCTTTAAATCCCTCTGATGCGAGCTTGATGAACCTTCCAACTAAGGAGGATAAAAAGAACCCTGAGGAGCTAAAAG
TGCTAATTTTGGGGATTGACGAGACTTCTCCTGATGACCCTCATAGGTCAGATACTATGATGGTCATTTCCTACAATGTC
AATACGCAAAAGGGGTATATTTTGTCCATTCCGAGAGATACCATGGTCACAATTCCCGGCCATGGGGTTCAAAAAATAAA
CGCAGCCTATCCAATTGGCGGGCCTAAACTTGCCATGGAAGAAGTATCACAGCTTATTGGAGAAGACATCAGCTACTATG
TGAAAATTGACTATGAAGGTTTTAAAAAGCTTGTGGACGCTATAGGCGGTGTGGAAATGAATGTTCCTATAGACATGAAT
TATGACGATTATGCAGGGAATTTGCACATTCACCTGAAAAAAGGGTGGCAGCATTTGGATGGAGAAGAGGCTTTGCAGTT
GGTGAGGTTTAGACATGGTTATGCTGAGCAGGATTTAGAGAGGGTAAAGGTCCAGAGGGAATTTTTGTTGGCGGCTTTAG
ACAAAATTAAAAGCCCTTCTATTCTTTTGAAATTGCCTCAGCTCTTAAGGACGGTCAATCAATATGTGGAGACTAATATT
CCCCCTTCTCTGATGGTCAAATACGCCGAGTACGCTGCAAAAGTTAGTAAAAATGACATAATTACTGCTACACTGCCTGG
AAACCCTGAATATATAAATGGCATAGCTTACTATGTTGTAGATTCAGAGGAGATAAAAAAATTCATGTCAGATTTACAAA
AAGGGGAATTAAATCAGTCTGTTAAAATAGAAGTATTAAATGGGTGTGGCATTCCTGGAGCTGCAGGGAAAGTGGCGGAA
ATTTTAAAACAGCAGGGCTTTGATGTGGTTCGCGTGGGAAATGTGAATGGAGCTTCTTATGATACTACTCAGATAATTTT
AAGAAGTGAGAATAAAAAGGTTGCAAATGAGCTCAAGAAGCTTCTTAAAAATGCTGTGATAGTAGAGGACTACCAGAAAA
AAAGCGATGCTGATATAACCATAATTTTAGGGAAAAATGTAAGCTTAGAGGGGTGA

Upstream 100 bases:

>100_bases
GACAGCACTATATGCTATGTGATAAAGAGAAATATGATACTTTATGAGAAAACCGTGAGCGGAAGAAACGACATTCTTTT
AAAATTGGGAGAGGAGAAAC

Downstream 100 bases:

>100_bases
TTTAGTGATAGAGGCAAAAGAGAAGGTTTATAAAATTTGCAGGGTTTTAGATGAAAAAAAGGCCTTTGATGTGAAAATTT
TGTACATTGGCGAACTTACT

Product: transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MRRFFKIFALFLGLLVLSLGTGAYIYLKSLNPSDASLMNLPTKEDKKNPEELKVLILGIDETSPDDPHRSDTMMVISYNV
NTQKGYILSIPRDTMVTIPGHGVQKINAAYPIGGPKLAMEEVSQLIGEDISYYVKIDYEGFKKLVDAIGGVEMNVPIDMN
YDDYAGNLHIHLKKGWQHLDGEEALQLVRFRHGYAEQDLERVKVQREFLLAALDKIKSPSILLKLPQLLRTVNQYVETNI
PPSLMVKYAEYAAKVSKNDIITATLPGNPEYINGIAYYVVDSEEIKKFMSDLQKGELNQSVKIEVLNGCGIPGAAGKVAE
ILKQQGFDVVRVGNVNGASYDTTQIILRSENKKVANELKKLLKNAVIVEDYQKKSDADITIILGKNVSLEG

Sequences:

>Translated_391_residues
MRRFFKIFALFLGLLVLSLGTGAYIYLKSLNPSDASLMNLPTKEDKKNPEELKVLILGIDETSPDDPHRSDTMMVISYNV
NTQKGYILSIPRDTMVTIPGHGVQKINAAYPIGGPKLAMEEVSQLIGEDISYYVKIDYEGFKKLVDAIGGVEMNVPIDMN
YDDYAGNLHIHLKKGWQHLDGEEALQLVRFRHGYAEQDLERVKVQREFLLAALDKIKSPSILLKLPQLLRTVNQYVETNI
PPSLMVKYAEYAAKVSKNDIITATLPGNPEYINGIAYYVVDSEEIKKFMSDLQKGELNQSVKIEVLNGCGIPGAAGKVAE
ILKQQGFDVVRVGNVNGASYDTTQIILRSENKKVANELKKLLKNAVIVEDYQKKSDADITIILGKNVSLEG
>Mature_391_residues
MRRFFKIFALFLGLLVLSLGTGAYIYLKSLNPSDASLMNLPTKEDKKNPEELKVLILGIDETSPDDPHRSDTMMVISYNV
NTQKGYILSIPRDTMVTIPGHGVQKINAAYPIGGPKLAMEEVSQLIGEDISYYVKIDYEGFKKLVDAIGGVEMNVPIDMN
YDDYAGNLHIHLKKGWQHLDGEEALQLVRFRHGYAEQDLERVKVQREFLLAALDKIKSPSILLKLPQLLRTVNQYVETNI
PPSLMVKYAEYAAKVSKNDIITATLPGNPEYINGIAYYVVDSEEIKKFMSDLQKGELNQSVKIEVLNGCGIPGAAGKVAE
ILKQQGFDVVRVGNVNGASYDTTQIILRSENKKVANELKKLLKNAVIVEDYQKKSDADITIILGKNVSLEG

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 43552; Mature: 43552

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFFKIFALFLGLLVLSLGTGAYIYLKSLNPSDASLMNLPTKEDKKNPEELKVLILGID
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCEEEEEEEEC
ETSPDDPHRSDTMMVISYNVNTQKGYILSIPRDTMVTIPGHGVQKINAAYPIGGPKLAME
CCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEECCCCCEEECCCCCCCCCHHHHH
EVSQLIGEDISYYVKIDYEGFKKLVDAIGGVEMNVPIDMNYDDYAGNLHIHLKKGWQHLD
HHHHHHCCCCEEEEEEEHHHHHHHHHHHCCEEEECEEECCCCCCCCCEEEEEECCCCCCC
GEEALQLVRFRHGYAEQDLERVKVQREFLLAALDKIKSPSILLKLPQLLRTVNQYVETNI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PPSLMVKYAEYAAKVSKNDIITATLPGNPEYINGIAYYVVDSEEIKKFMSDLQKGELNQS
CHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCEEEEEECHHHHHHHHHHHHHCCCCCC
VKIEVLNGCGIPGAAGKVAEILKQQGFDVVRVGNVNGASYDTTQIILRSENKKVANELKK
EEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHH
LLKNAVIVEDYQKKSDADITIILGKNVSLEG
HHHCCEEHEHHCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRRFFKIFALFLGLLVLSLGTGAYIYLKSLNPSDASLMNLPTKEDKKNPEELKVLILGID
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCEEEEEEEEC
ETSPDDPHRSDTMMVISYNVNTQKGYILSIPRDTMVTIPGHGVQKINAAYPIGGPKLAME
CCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEECCCCCEEECCCCCCCCCHHHHH
EVSQLIGEDISYYVKIDYEGFKKLVDAIGGVEMNVPIDMNYDDYAGNLHIHLKKGWQHLD
HHHHHHCCCCEEEEEEEHHHHHHHHHHHCCEEEECEEECCCCCCCCCEEEEEECCCCCCC
GEEALQLVRFRHGYAEQDLERVKVQREFLLAALDKIKSPSILLKLPQLLRTVNQYVETNI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PPSLMVKYAEYAAKVSKNDIITATLPGNPEYINGIAYYVVDSEEIKKFMSDLQKGELNQS
CHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCEEEEEECHHHHHHHHHHHHHCCCCCC
VKIEVLNGCGIPGAAGKVAEILKQQGFDVVRVGNVNGASYDTTQIILRSENKKVANELKK
EEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHH
LLKNAVIVEDYQKKSDADITIILGKNVSLEG
HHHCCEEHEHHCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]