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The map label for this gene is SodA [H]

Identifier: 20807338

GI number: 20807338

Start: 866981

End: 867547

Strand: Reverse

Name: SodA [H]

Synonym: TTE0857

Alternate gene names: 20807338

Gene position: 867547-866981 (Counterclockwise)

Preceding gene: 20807342

Following gene: 20807337

Centisome position: 32.26

GC content: 37.92

Gene sequence:

>567_bases
ATGGATAAGCTTGTAGCAAAAAAATATAATTTAGTTTTAAGAGGAATATCTCAAAGGACTCTTGAAGAACACTACAAGTT
GTACAATGGATATGTAGAAAAGACAAACGAAATACGTGAAAAATTAAAAACAGTCGATCGTTCAAAAGCAAATGCCAGCT
ATAGTGAATATAGAGAACTCAAACTAGAAGAGACTTACAATTTAGATGGAGTAAAACTTCACGAGTTATATTTTGAAAAC
TTAGGAGGAGCAGGTGGCATACCTGATGGCATAATAGCCCCAATGATTGCACTTGATTTCGGCTCCTTTGAAAACTGGAG
ACAGGACTTCATAGCCTGTGGAATGGCTTCCCGTGGCTGGACTGTCCTTTGCTTTGACCCTATAGATTTAAAACTTCACA
ATTACCTTCAGGACTTCCACAACCACGGCATAGTATTAAGGACGATTCCTCTTCTGGTCCTTGACACCTACGAACACGCC
TATTTTATAGATTACGGCACTGATAAAAAAAGCTATATAGAGGCCTTTATGAACAATATAAAATGGGAGGAGGTAGGTAA
CAGTTGA

Upstream 100 bases:

>100_bases
TAAAATAGCATTTTGAATAGATCACTATATAAATTCTTTTTATGCACTAATTATATATCTTTTCATATGCTAAAATTAGA
TATGCAAGAGGAGGAATAAT

Downstream 100 bases:

>100_bases
AGATAGTAATGCAAAGTGATATGATTTTAATTAGGTGATAATAAATGTTACTAAGCATGCAAAAAGTAAAGGAAATGTAC
TCAATTAGGAAAAGGAAGGA

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDKLVAKKYNLVLRGISQRTLEEHYKLYNGYVEKTNEIREKLKTVDRSKANASYSEYRELKLEETYNLDGVKLHELYFEN
LGGAGGIPDGIIAPMIALDFGSFENWRQDFIACGMASRGWTVLCFDPIDLKLHNYLQDFHNHGIVLRTIPLLVLDTYEHA
YFIDYGTDKKSYIEAFMNNIKWEEVGNS

Sequences:

>Translated_188_residues
MDKLVAKKYNLVLRGISQRTLEEHYKLYNGYVEKTNEIREKLKTVDRSKANASYSEYRELKLEETYNLDGVKLHELYFEN
LGGAGGIPDGIIAPMIALDFGSFENWRQDFIACGMASRGWTVLCFDPIDLKLHNYLQDFHNHGIVLRTIPLLVLDTYEHA
YFIDYGTDKKSYIEAFMNNIKWEEVGNS
>Mature_188_residues
MDKLVAKKYNLVLRGISQRTLEEHYKLYNGYVEKTNEIREKLKTVDRSKANASYSEYRELKLEETYNLDGVKLHELYFEN
LGGAGGIPDGIIAPMIALDFGSFENWRQDFIACGMASRGWTVLCFDPIDLKLHNYLQDFHNHGIVLRTIPLLVLDTYEHA
YFIDYGTDKKSYIEAFMNNIKWEEVGNS

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=168, Percent_Identity=29.7619047619048, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI67782305, Length=168, Percent_Identity=29.7619047619048, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1787946, Length=184, Percent_Identity=32.0652173913043, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: 2020 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 900 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 21817; Mature: 21817

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLVAKKYNLVLRGISQRTLEEHYKLYNGYVEKTNEIREKLKTVDRSKANASYSEYREL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLEETYNLDGVKLHELYFENLGGAGGIPDGIIAPMIALDFGSFENWRQDFIACGMASRGW
HHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
TVLCFDPIDLKLHNYLQDFHNHGIVLRTIPLLVLDTYEHAYFIDYGTDKKSYIEAFMNNI
EEEEECCCCHHHHHHHHHHHHCCEEEHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHCC
KWEEVGNS
CHHHCCCC
>Mature Secondary Structure
MDKLVAKKYNLVLRGISQRTLEEHYKLYNGYVEKTNEIREKLKTVDRSKANASYSEYREL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLEETYNLDGVKLHELYFENLGGAGGIPDGIIAPMIALDFGSFENWRQDFIACGMASRGW
HHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
TVLCFDPIDLKLHNYLQDFHNHGIVLRTIPLLVLDTYEHAYFIDYGTDKKSYIEAFMNNI
EEEEECCCCHHHHHHHHHHHHCCEEEHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHCC
KWEEVGNS
CHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]