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The map label for this gene is NlpD2 [C]

Identifier: 20807323

GI number: 20807323

Start: 850209

End: 851114

Strand: Reverse

Name: NlpD2 [C]

Synonym: TTE0841

Alternate gene names: 20807323

Gene position: 851114-850209 (Counterclockwise)

Preceding gene: 20807329

Following gene: 20807322

Centisome position: 31.65

GC content: 39.85

Gene sequence:

>906_bases
ATGGCTAAAAAAAGGCAAAAGTACATAAACATAATGGTCATTCCTGACTCAAACCGGCAAATAAAAACTATAAAGCTATC
CATTCCCCTTTTAAAGGCCGTTTCAACAGTGGCCGTAGCCTTGATATTAACCGCGACAATATCTTTAGTATATTTCAGCA
AAACTACCGCTCATCTTTACACTGTAATACTGGAAAAAGACATGCAGATATCCCAACTCACACAGATAAAAGAAGAACAA
GACAGAAAAATTGCAGCTCTTAACAAAAACGCCCAGATGGTAAATGAAAAAATTAAAAATCTCACAGAATTAGAAGAAAA
AATAAGGAGAATGGTAGGACTTGCCTCTCCCACTACAAGCCGTGGAAATGTAACAAGAACTCTTCCATCAGATAGCACAA
TATCTTACGACAACCAAACAACCACAGAGCTTTTATCAGAAATTGACCAGAAGACAGAAGACTTTAAAGATTTGATATCA
AAAGTAGAAGCTCGGCTTAACTATTTAGCAGCTCTTCCCTCGGCTTACCCCGTATACGGTACTATAACTTCCCCTTTTGG
AATGAGAAAAAACCCTTTTGGATATGGATATGAATTTCACCCGGGGATCGACATATCTGTTCACATAGGAACACCGGTTA
AAGCCGCAGGAAAGGGTGTCGTAGTATACGCAGGGTGGCTTGCAGGCTACGGCAAAGCGGTAATAATCGACCACGGATAT
GGTATTGAATCTGTATACGGCCATAATTCTCAAATCCTCGTAAAAGTAGGACAAACTGTAAATAGAGGAGATGTAATAGC
TAAATCAGGAAACACGGGAAGAAGCACAGGACCTCACGTCCATTTTGAAATAAGGGCGAATGGAAGCCCTGTAAACCCGA
TGAAATATCTAGCAAAGGGGAATTAA

Upstream 100 bases:

>100_bases
TTTTAAATATTAACAAAATTTAAAATTTGATTTTCAGGCAGGATTTTTAGGTATGGATATAGAATATATATTTGTCCATT
TTTTTGGGGTGGGGGTAAAA

Downstream 100 bases:

>100_bases
CATGTTTCAGAAAAAGAGCCAGGTAGAAATAAATCCTGAAAAAATTGATACTGTAATAGGGAAAAACACCTCATTTGAAG
GAACCATAAGGTCTGAAGGT

Product: membrane proteins related to metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MAKKRQKYINIMVIPDSNRQIKTIKLSIPLLKAVSTVAVALILTATISLVYFSKTTAHLYTVILEKDMQISQLTQIKEEQ
DRKIAALNKNAQMVNEKIKNLTELEEKIRRMVGLASPTTSRGNVTRTLPSDSTISYDNQTTTELLSEIDQKTEDFKDLIS
KVEARLNYLAALPSAYPVYGTITSPFGMRKNPFGYGYEFHPGIDISVHIGTPVKAAGKGVVVYAGWLAGYGKAVIIDHGY
GIESVYGHNSQILVKVGQTVNRGDVIAKSGNTGRSTGPHVHFEIRANGSPVNPMKYLAKGN

Sequences:

>Translated_301_residues
MAKKRQKYINIMVIPDSNRQIKTIKLSIPLLKAVSTVAVALILTATISLVYFSKTTAHLYTVILEKDMQISQLTQIKEEQ
DRKIAALNKNAQMVNEKIKNLTELEEKIRRMVGLASPTTSRGNVTRTLPSDSTISYDNQTTTELLSEIDQKTEDFKDLIS
KVEARLNYLAALPSAYPVYGTITSPFGMRKNPFGYGYEFHPGIDISVHIGTPVKAAGKGVVVYAGWLAGYGKAVIIDHGY
GIESVYGHNSQILVKVGQTVNRGDVIAKSGNTGRSTGPHVHFEIRANGSPVNPMKYLAKGN
>Mature_300_residues
AKKRQKYINIMVIPDSNRQIKTIKLSIPLLKAVSTVAVALILTATISLVYFSKTTAHLYTVILEKDMQISQLTQIKEEQD
RKIAALNKNAQMVNEKIKNLTELEEKIRRMVGLASPTTSRGNVTRTLPSDSTISYDNQTTTELLSEIDQKTEDFKDLISK
VEARLNYLAALPSAYPVYGTITSPFGMRKNPFGYGYEFHPGIDISVHIGTPVKAAGKGVVVYAGWLAGYGKAVIIDHGYG
IESVYGHNSQILVKVGQTVNRGDVIAKSGNTGRSTGPHVHFEIRANGSPVNPMKYLAKGN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=47.3684210526316, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI87082297, Length=242, Percent_Identity=30.1652892561983, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789099, Length=108, Percent_Identity=43.5185185185185, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=43.298969072165, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33069; Mature: 32937

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRQKYINIMVIPDSNRQIKTIKLSIPLLKAVSTVAVALILTATISLVYFSKTTAHLY
CCCCCCEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEECHHHHEE
TVILEKDMQISQLTQIKEEQDRKIAALNKNAQMVNEKIKNLTELEEKIRRMVGLASPTTS
EEEHHCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RGNVTRTLPSDSTISYDNQTTTELLSEIDQKTEDFKDLISKVEARLNYLAALPSAYPVYG
CCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TITSPFGMRKNPFGYGYEFHPGIDISVHIGTPVKAAGKGVVVYAGWLAGYGKAVIIDHGY
EECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCC
GIESVYGHNSQILVKVGQTVNRGDVIAKSGNTGRSTGPHVHFEIRANGSPVNPMKYLAKG
CCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHCCC
N
C
>Mature Secondary Structure 
AKKRQKYINIMVIPDSNRQIKTIKLSIPLLKAVSTVAVALILTATISLVYFSKTTAHLY
CCCCCEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEECHHHHEE
TVILEKDMQISQLTQIKEEQDRKIAALNKNAQMVNEKIKNLTELEEKIRRMVGLASPTTS
EEEHHCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RGNVTRTLPSDSTISYDNQTTTELLSEIDQKTEDFKDLISKVEARLNYLAALPSAYPVYG
CCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TITSPFGMRKNPFGYGYEFHPGIDISVHIGTPVKAAGKGVVVYAGWLAGYGKAVIIDHGY
EECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCC
GIESVYGHNSQILVKVGQTVNRGDVIAKSGNTGRSTGPHVHFEIRANGSPVNPMKYLAKG
CCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]