Click here to switch to the map view.

The map label for this gene is Ssb

Identifier: 20807311

GI number: 20807311

Start: 836505

End: 837155

Strand: Direct

Name: Ssb

Synonym: TTE0829

Alternate gene names: NA

Gene position: 836505-837155 (Clockwise)

Preceding gene: 20807310

Following gene: 20807320

Centisome position: 31.1

GC content: 40.4

Gene sequence:

>651_bases
ATGGCAGGTAATTTTTTAGAAAACAATACCGTCACGCTGGTTGGAAAGGTTTTTACACCCCTTGAATTCAGTCATGAACT
TTACGGAGAAAAATTTTTTAATTTTATTTTAGAGGTACCAAGGTTGAGCGAAACGAAAGACTACCTTCCGATAACTATCT
CTAACCGGCTCTTCGAGGGAATGAACTTGGAAGTGGGGACAAGGGTGAAGATTGAAGGGCAATTGAGGTCTTACAACAGA
AAATCTCCAGAAGAGGGGAAAAACAAGCTCATTCTCACTGTGTTTGCCCGCGACATCTCTGTTGTCCCGGAGGAGGAAGT
TGTAAAAAACCCTAATGAAATTTTTTTGGATGGATTCATATGTAAAAAGCCAGTGTACAGGACTACGCCTTTAGGAAGAG
AGATAACTGATTTATTGATTGCTGTAAACAGGCCTTATAACAAATCTGATTACATACCTGTAATTGCGTGGGGTAGAAAT
GCTAGGTTTTCTGAAAAACTTGAGGTGGGAGACCGCATAAGGTTGTGGGGGAGAGTGCAGAGCAGAGAATATCAGAAAAA
GTTGGGAGACGAAGTGGTGACAAAAGTTGCTTATGAAGTATCTATAACCCGCATGGAGGTAGTGGAAAAAGAATTGCAAA
AAACAGAATAA

Upstream 100 bases:

>100_bases
TAGAAGGAAGAGAAAAATTTTTTGAATCGCCTGTCATAATCGGGGTGTAGGGTTAATATATTTTTAAAAGGACACATAAG
GGGAAGGGGAGAGTGAACGG

Downstream 100 bases:

>100_bases
AAAGGTCAGAAAAAACACCCGAAAACTCGGGTGTTTTGTTTTAACCTCTTAAGTCTTCCATTAATTTTGTTTTTTCCCTG
GTTTTTTCGTCTACTACTTT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAGNFLENNTVTLVGKVFTPLEFSHELYGEKFFNFILEVPRLSETKDYLPITISNRLFEGMNLEVGTRVKIEGQLRSYNR
KSPEEGKNKLILTVFARDISVVPEEEVVKNPNEIFLDGFICKKPVYRTTPLGREITDLLIAVNRPYNKSDYIPVIAWGRN
ARFSEKLEVGDRIRLWGRVQSREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKTE

Sequences:

>Translated_216_residues
MAGNFLENNTVTLVGKVFTPLEFSHELYGEKFFNFILEVPRLSETKDYLPITISNRLFEGMNLEVGTRVKIEGQLRSYNR
KSPEEGKNKLILTVFARDISVVPEEEVVKNPNEIFLDGFICKKPVYRTTPLGREITDLLIAVNRPYNKSDYIPVIAWGRN
ARFSEKLEVGDRIRLWGRVQSREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKTE
>Mature_215_residues
AGNFLENNTVTLVGKVFTPLEFSHELYGEKFFNFILEVPRLSETKDYLPITISNRLFEGMNLEVGTRVKIEGQLRSYNRK
SPEEGKNKLILTVFARDISVVPEEEVVKNPNEIFLDGFICKKPVYRTTPLGREITDLLIAVNRPYNKSDYIPVIAWGRNA
RFSEKLEVGDRIRLWGRVQSREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKTE

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25009; Mature: 24878

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNFLENNTVTLVGKVFTPLEFSHELYGEKFFNFILEVPRLSETKDYLPITISNRLFEG
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCC
MNLEVGTRVKIEGQLRSYNRKSPEEGKNKLILTVFARDISVVPEEEVVKNPNEIFLDGFI
CCCCCCCEEEEECHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEECEE
CKKPVYRTTPLGREITDLLIAVNRPYNKSDYIPVIAWGRNARFSEKLEVGDRIRLWGRVQ
CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCHHHCCCCEEEEEECHH
SREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGNFLENNTVTLVGKVFTPLEFSHELYGEKFFNFILEVPRLSETKDYLPITISNRLFEG
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCC
MNLEVGTRVKIEGQLRSYNRKSPEEGKNKLILTVFARDISVVPEEEVVKNPNEIFLDGFI
CCCCCCCEEEEECHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEECEE
CKKPVYRTTPLGREITDLLIAVNRPYNKSDYIPVIAWGRNARFSEKLEVGDRIRLWGRVQ
CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCHHHCCCCEEEEEECHH
SREYQKKLGDEVVTKVAYEVSITRMEVVEKELQKTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA