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The map label for this gene is UgpB [C]

Identifier: 20807281

GI number: 20807281

Start: 797132

End: 798385

Strand: Direct

Name: UgpB [C]

Synonym: TTE0799

Alternate gene names: 20807281

Gene position: 797132-798385 (Clockwise)

Preceding gene: 20807280

Following gene: 20807282

Centisome position: 29.64

GC content: 40.19

Gene sequence:

>1254_bases
ATGAGTAGAAAATTTTTGAGCATTTTTGTGTTGACAGTTTTTGTGCTGGCTACTATTTTGGCAGGGTGTTCTTCAAGTAA
GACACCGGAGAGCCAGACACCTACTCAAGAAACTAGTAAACCAGTGACAATAAAACTTGGAATGTGGTCTTCATCTCCTG
CAGAGAAAAAGATTGTAGATGACCAGATAGCAAAGTTTAAAGAAAAGTACCCCAATATAGATGTGCAGATAGAAACAATA
GTGGGAGATTACATGCAGAAATTGCAGACAGAACTTGCCTCAAATACTGCTCCAGACATATTCTATCTTGACAGCATGCC
GGCACCTCAGCTTATGTCTTCAGGTGTTTTAGAGCCACTAGATGAATACATTAAAAAATACAATGTGGATGTAAATGATT
TCGAACCTGCTTTACTTTCGGCCTTCCAGTGGGAAGGGAAAACCTATGGATTACCCAAGGATTATAACACTTTGGTACTT
TTCTACAATAAGGATATGTTCAAAGAAGCAGGAATAAATGAGCCTCCCAAGACATGGGAAGAGCTAAGAGAAACAGCCAA
GAAACTTACTAAAAATGGAGTAAAAGGTATTGTCTTGTCTGCTGACCTGGCTAGATTTGACGCTTTTATCAATCAAAATG
ATGGTTCTGTTTACAAAGACGGGAAAGTTACTTTGAATTTACCACAGAATGCAGAAGCGCTTGACTTTTACGTAGGGCTC
ATTATAAGGGACAAAGTGGCGGATACTCCGCAGAACATGGGAGAAGGATGGAATGGCGATGCTTTTGCCGCTAAGAAGGC
TGCAATGGCAATAGAAGGAGGATGGATGATACCTTTCTTAAAGGAGAAAGCACCAGATTTGAATTATGGCATAGCAGAGC
TTCCGGCAGGTAAGAAGAAATCTACTATGGCTTTCACTGTGGCATACGTGATGAATAAAAACAGCAAGCACAAAGATGAA
GCCTTCAAACTAATTGAGTTTTTAACAGGAAAAGAAGGACAGCAATTTGTAGTAGACTCTGGACTTGCGTTGCCTTCAAG
GAAGTCAATGGAAGCCAATTTTAAAGAAAAATATCCAGAAAGAGCACCTTTTATCGATGGAGCTTCTTATGCTGTGCCAT
GGCAGTTTGGTTTGTATGGTACAAAATTGGTAGATGCTGCTAATAAAGCGTGTGAGGCTTTGATAATGAAGCAAATAGGC
AGTGCTCAAGAAGCGCTGGACAATGCTCAGAAAGAGGTCATGCAGTCTAAATAA

Upstream 100 bases:

>100_bases
AAATAAAAATTAAAGGGGGGATAAGTGGAGAAAAAGGTGGATTTTAAAGTGCCTTCAAATGAATATTTTAATACAAAACT
TTGAAAGGGGAAAGAGGGCA

Downstream 100 bases:

>100_bases
TTTTGTGAAAAGCAGCACCTTACTCAGTTAAGGTGCTGCGCTTCTGATTTTTATGAGGAAGGAAGGTGTAAAAGTGGAGG
CTAGAATTAGCTTAAAAAGA

Product: sugar-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSRKFLSIFVLTVFVLATILAGCSSSKTPESQTPTQETSKPVTIKLGMWSSSPAEKKIVDDQIAKFKEKYPNIDVQIETI
VGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPLDEYIKKYNVDVNDFEPALLSAFQWEGKTYGLPKDYNTLVL
FYNKDMFKEAGINEPPKTWEELRETAKKLTKNGVKGIVLSADLARFDAFINQNDGSVYKDGKVTLNLPQNAEALDFYVGL
IIRDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKKKSTMAFTVAYVMNKNSKHKDE
AFKLIEFLTGKEGQQFVVDSGLALPSRKSMEANFKEKYPERAPFIDGASYAVPWQFGLYGTKLVDAANKACEALIMKQIG
SAQEALDNAQKEVMQSK

Sequences:

>Translated_417_residues
MSRKFLSIFVLTVFVLATILAGCSSSKTPESQTPTQETSKPVTIKLGMWSSSPAEKKIVDDQIAKFKEKYPNIDVQIETI
VGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPLDEYIKKYNVDVNDFEPALLSAFQWEGKTYGLPKDYNTLVL
FYNKDMFKEAGINEPPKTWEELRETAKKLTKNGVKGIVLSADLARFDAFINQNDGSVYKDGKVTLNLPQNAEALDFYVGL
IIRDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKKKSTMAFTVAYVMNKNSKHKDE
AFKLIEFLTGKEGQQFVVDSGLALPSRKSMEANFKEKYPERAPFIDGASYAVPWQFGLYGTKLVDAANKACEALIMKQIG
SAQEALDNAQKEVMQSK
>Mature_416_residues
SRKFLSIFVLTVFVLATILAGCSSSKTPESQTPTQETSKPVTIKLGMWSSSPAEKKIVDDQIAKFKEKYPNIDVQIETIV
GDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPLDEYIKKYNVDVNDFEPALLSAFQWEGKTYGLPKDYNTLVLF
YNKDMFKEAGINEPPKTWEELRETAKKLTKNGVKGIVLSADLARFDAFINQNDGSVYKDGKVTLNLPQNAEALDFYVGLI
IRDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKKKSTMAFTVAYVMNKNSKHKDEA
FKLIEFLTGKEGQQFVVDSGLALPSRKSMEANFKEKYPERAPFIDGASYAVPWQFGLYGTKLVDAANKACEALIMKQIGS
AQEALDNAQKEVMQSK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=280, Percent_Identity=27.8571428571429, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787569, Length=365, Percent_Identity=24.9315068493151, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46304; Mature: 46173

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKFLSIFVLTVFVLATILAGCSSSKTPESQTPTQETSKPVTIKLGMWSSSPAEKKIVD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHH
DQIAKFKEKYPNIDVQIETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPL
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCHHHH
DEYIKKYNVDVNDFEPALLSAFQWEGKTYGLPKDYNTLVLFYNKDMFKEAGINEPPKTWE
HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCHHHHH
ELRETAKKLTKNGVKGIVLSADLARFDAFINQNDGSVYKDGKVTLNLPQNAEALDFYVGL
HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCEEECCEEEEECCCCCHHHHHHHHH
IIRDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKKK
HHCCHHHCCCHHHCCCCCCCHHHHHHHHEEECCCEECCHHHHCCCCCCCCHHHCCCCCCC
STMAFTVAYVMNKNSKHKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMEANFKEKYPE
CHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCC
RAPFIDGASYAVPWQFGLYGTKLVDAANKACEALIMKQIGSAQEALDNAQKEVMQSK
CCCCCCCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRKFLSIFVLTVFVLATILAGCSSSKTPESQTPTQETSKPVTIKLGMWSSSPAEKKIVD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHH
DQIAKFKEKYPNIDVQIETIVGDYMQKLQTELASNTAPDIFYLDSMPAPQLMSSGVLEPL
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCHHHH
DEYIKKYNVDVNDFEPALLSAFQWEGKTYGLPKDYNTLVLFYNKDMFKEAGINEPPKTWE
HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCHHHHH
ELRETAKKLTKNGVKGIVLSADLARFDAFINQNDGSVYKDGKVTLNLPQNAEALDFYVGL
HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCEEECCEEEEECCCCCHHHHHHHHH
IIRDKVADTPQNMGEGWNGDAFAAKKAAMAIEGGWMIPFLKEKAPDLNYGIAELPAGKKK
HHCCHHHCCCHHHCCCCCCCHHHHHHHHEEECCCEECCHHHHCCCCCCCCHHHCCCCCCC
STMAFTVAYVMNKNSKHKDEAFKLIEFLTGKEGQQFVVDSGLALPSRKSMEANFKEKYPE
CHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCC
RAPFIDGASYAVPWQFGLYGTKLVDAANKACEALIMKQIGSAQEALDNAQKEVMQSK
CCCCCCCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA