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The map label for this gene is 20807197

Identifier: 20807197

GI number: 20807197

Start: 713940

End: 714371

Strand: Direct

Name: 20807197

Synonym: TTE0710

Alternate gene names: NA

Gene position: 713940-714371 (Clockwise)

Preceding gene: 20807196

Following gene: 20807198

Centisome position: 26.55

GC content: 32.87

Gene sequence:

>432_bases
ATGAATGCTATGAAATGGTATAATATATGTAAAGAATTTTGTGTGGTGAGGAAGATGAGTATCACTGATGAAGAGAAAAA
GAAAATACGTGAAAATTGGCGTATAAGAAGTGAAAAAGAGAAAGAAATACTAGAAGTACGAAAAAGGGAAGCATTAGATA
AAGCTTATAAGATTGCTAAATTTTTAAAAGAAAAATACAACGTGAGTAAAGTTGTCTTGTACGGATCACTGGCAAGGGAG
TTTGATTTTTGGGAGTTTTCAGATATTGATATTTTTATAGATGGCTGGGATGATGATAGGTTTAACTACTGGACAATGTT
TCTTGAGATAGAGAATATTGCAAGGCCTTATAAAGTGAGTATAGTTACACAACGAGACACTACGGAAGCTTTGTTAAAAG
AAATAGAGAAAGAGGGGAGAGAAATAGGGTAA

Upstream 100 bases:

>100_bases
GCTATTTTACGGCGATTTTATTAAAAACTTTATAATTTTTTAAATTTTTAATGACGGTTTTAAATATGGCGTTTTTTCTA
AGCTTTGCTGGATGAATAAT

Downstream 100 bases:

>100_bases
TGGATGTTAATAAAATAAAAGTTATTTCAGCAAGACTTAAAATAGAACTTGATAATATACAAAAATTGTATGATATTTTA
AAAGACAGAGGGATGTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Subunit

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNAMKWYNICKEFCVVRKMSITDEEKKKIRENWRIRSEKEKEILEVRKREALDKAYKIAKFLKEKYNVSKVVLYGSLARE
FDFWEFSDIDIFIDGWDDDRFNYWTMFLEIENIARPYKVSIVTQRDTTEALLKEIEKEGREIG

Sequences:

>Translated_143_residues
MNAMKWYNICKEFCVVRKMSITDEEKKKIRENWRIRSEKEKEILEVRKREALDKAYKIAKFLKEKYNVSKVVLYGSLARE
FDFWEFSDIDIFIDGWDDDRFNYWTMFLEIENIARPYKVSIVTQRDTTEALLKEIEKEGREIG
>Mature_143_residues
MNAMKWYNICKEFCVVRKMSITDEEKKKIRENWRIRSEKEKEILEVRKREALDKAYKIAKFLKEKYNVSKVVLYGSLARE
FDFWEFSDIDIFIDGWDDDRFNYWTMFLEIENIARPYKVSIVTQRDTTEALLKEIEKEGREIG

Specific function: Unknown

COG id: COG1669

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17412; Mature: 17412

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAMKWYNICKEFCVVRKMSITDEEKKKIRENWRIRSEKEKEILEVRKREALDKAYKIAK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLKEKYNVSKVVLYGSLAREFDFWEFSDIDIFIDGWDDDRFNYWTMFLEIENIARPYKVS
HHHHHCCHHHEEEEHHHHHHCCCCEECCEEEEEECCCCCCEEEEEEEEEHHHCCCCEEEE
IVTQRDTTEALLKEIEKEGREIG
EEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNAMKWYNICKEFCVVRKMSITDEEKKKIRENWRIRSEKEKEILEVRKREALDKAYKIAK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLKEKYNVSKVVLYGSLAREFDFWEFSDIDIFIDGWDDDRFNYWTMFLEIENIARPYKVS
HHHHHCCHHHEEEEHHHHHHCCCCEECCEEEEEECCCCCCEEEEEEEEEHHHCCCCEEEE
IVTQRDTTEALLKEIEKEGREIG
EEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA