Click here to switch to the map view.

The map label for this gene is AtpF

Identifier: 20807126

GI number: 20807126

Start: 636834

End: 637340

Strand: Direct

Name: AtpF

Synonym: TTE0633

Alternate gene names: 20807126

Gene position: 636834-637340 (Clockwise)

Preceding gene: 20807125

Following gene: 20807127

Centisome position: 23.68

GC content: 36.88

Gene sequence:

>507_bases
ATGAAAGAAGGGAAAGCCTTGGAACTTTTTAATCTCTCCACTTTTGTGTTTACAATCATCAACCTTTTGGTGCTTTATTA
TATCCTAAAAAGGCTTTTGTTTAAGCCTGTTACAAAGTTTTTGGAAGATAGAGAGAATAAAATTAAATCAGCTCTAGAAG
ATGCTGACAAACAAAGGGAAGAAGCCTATAGCTTAAAAGCACAGTATGAGGAAAAACTTCAGAATGCGGAAAACGAAGGC
AGGGCTATAATTGAAAAAGCCCAAAAAGAAGCAGAAGAAAGAGCAAGTGAAATCATAAAGAGTGCCAATAAGGAAGCAGA
GAGCATAATTGAAAAAGCAAAAGAAGAGGCAGTTCTTGAGAAGATAAAGGCTATGCATGAGCTGAGGGCAGAAATGTCAC
ATCTAATAATAGAAGCTGCTTCTAAGGTTTTAGAGAAAAAACTGCCTGTTGAGGATGAAGACCTTATTAAAGAGGTCATT
GAGGAGGCAGGGTCATGGAACAAATAA

Upstream 100 bases:

>100_bases
GTTAGGAGGCGCTCTTGCAGAGGCAACAGCCATTTACGGGTTGCTTGTGGCAATAATGATCATAATCTTCAAGCCATAAA
GGAAATACCAAAATTTCCTG

Downstream 100 bases:

>100_bases
TAGCAAAAAGGTATGCCTCTGCCCTCTTTGATGTGGCTAAAAAAGAAGACAGGGTAAAAGAATACTACGAAGAATTGAAA
AAAGCTGTGGAGATATTGCA

Product: F0F1-type ATP synthase b subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKEGKALELFNLSTFVFTIINLLVLYYILKRLLFKPVTKFLEDRENKIKSALEDADKQREEAYSLKAQYEEKLQNAENEG
RAIIEKAQKEAEERASEIIKSANKEAESIIEKAKEEAVLEKIKAMHELRAEMSHLIIEAASKVLEKKLPVEDEDLIKEVI
EEAGSWNK

Sequences:

>Translated_168_residues
MKEGKALELFNLSTFVFTIINLLVLYYILKRLLFKPVTKFLEDRENKIKSALEDADKQREEAYSLKAQYEEKLQNAENEG
RAIIEKAQKEAEERASEIIKSANKEAESIIEKAKEEAVLEKIKAMHELRAEMSHLIIEAASKVLEKKLPVEDEDLIKEVI
EEAGSWNK
>Mature_168_residues
MKEGKALELFNLSTFVFTIINLLVLYYILKRLLFKPVTKFLEDRENKIKSALEDADKQREEAYSLKAQYEEKLQNAENEG
RAIIEKAQKEAEERASEIIKSANKEAESIIEKAKEEAVLEKIKAMHELRAEMSHLIIEAASKVLEKKLPVEDEDLIKEVI
EEAGSWNK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_THETN (Q8RC19)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_622297.1
- GeneID:   996567
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0633
- NMPDR:   fig|273068.3.peg.308
- HOGENOM:   HBG617328
- OMA:   INWGLLI
- ProtClustDB:   CLSK2303261
- BioCyc:   TTEN273068:TTE0633-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19380; Mature: 19380

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd3f8adc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGKALELFNLSTFVFTIINLLVLYYILKRLLFKPVTKFLEDRENKIKSALEDADKQRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYSLKAQYEEKLQNAENEGRAIIEKAQKEAEERASEIIKSANKEAESIIEKAKEEAVLE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
KIKAMHELRAEMSHLIIEAASKVLEKKLPVEDEDLIKEVIEEAGSWNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MKEGKALELFNLSTFVFTIINLLVLYYILKRLLFKPVTKFLEDRENKIKSALEDADKQRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYSLKAQYEEKLQNAENEGRAIIEKAQKEAEERASEIIKSANKEAESIIEKAKEEAVLE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
KIKAMHELRAEMSHLIIEAASKVLEKKLPVEDEDLIKEVIEEAGSWNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11997336