| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is Lon [H]
Identifier: 20807121
GI number: 20807121
Start: 632328
End: 634664
Strand: Direct
Name: Lon [H]
Synonym: TTE0627
Alternate gene names: 20807121
Gene position: 632328-634664 (Clockwise)
Preceding gene: 20807120
Following gene: 20807122
Centisome position: 23.51
GC content: 40.91
Gene sequence:
>2337_bases ATGGCAGAAAAAAGGTACACACTCCCTATGATTCCATTAAGAGGATTAACAATTTTCCCTTATATGGTAATTCATTTTGA TATAGGGCGAGAGAAATCCATAAGGGCTTTAGAAGAGGCCTTTATGAAAAATCAGCTTATATTTGTAACTACTCAGAAGG ACCCAGAGCTTGAAGACCCATCAATTGAGGACGTTTACAAGGTGGGGACTATAACTAAAGTCAAACAGATGTTGAAACTT CCCGGGGAGCTCATAAGAATTTTGGTTGAAGGTATAAGCAGAGCCGAGATTGACAAAGTCACAAGAGAAGACGAATTTTT TGAGGTGGAGGTAGTTGAAAAAGAGGAGCAGGCAGAGATTGAAAAGACTCCAGAGTTAGAAGCGCTGATGAGAAGTGTGG TCTCTGCTTTTGAAGAGTATGTAAATATGACTTCCCGCGTCCCCATTGAAAGCTTATACAATGTAATTAGCATAGAAGAG CCGGGAAGGCTTGCGGACATGATTGCAGCCCACATTTCTTTGAGCACAGCGCAAAATCAAGAGCTCTTAGAGTGCTTTGA TGTGAAAAAGAGGTTAGAAATTTTACTGGGCTTTTTAATGAAGGAGCTGGAAATATTAAAAATTGAGAGAGAAATAAATG CAAAAGTGAGAAGCCAGATTGACAAGCTTCAAAAGGAATATTATTTGAGGGAACAGCTAAAGGCCATAAAGGCAGAGTTA GGGGAAACGGAAGATTTTGACAGCGAGATAGAAGAGTATGAGAGGAAAATAGAAGAAAAGGATTTGCCTGAGGAAGTGAG AAAAAAGGCGAAAGAGGAGTTAAAGAGATTATCTAAAATGCCTCCCGGTTCTGCTGAGGCCTCTGTTGTAAGAACTTACC TTGACTGGATACTGGAACTTCCATGGAACTACGAGACAGAGGATATTCTAGATTTAAAAAGGGCTCAAAGGATACTGGAT GAGGACCACTACGGGCTTAAAAAAGTAAAAGAGAGGATAATAGAGTTTTTGGCAGTGAGAGCCTTTTACAATAAAGTTAA AAGCCCGATCTTATGCCTTGTAGGTCCTCCAGGAGTGGGCAAGACCTCCTTAGGAAGGTCAATAGCTAAAGCTATGAACA GAAAATTTGTAAGGCTTTCTCTTGGCGGCGTCAGAGATGAAGCGGAGATAAGAGGGCACAGGCGTACTTACGTTGGAGCT ATACCAGGAGGGATTATAAACTCTATAAAAATTGCAGGTTCAAAAAACCCTGTTTTTTTGCTGGACGAGATAGACAAGAT GAGTTCTGACTTTAGAGGCGACCCTGCTTCTGCTATGCTGGAAGTATTAGACCCCGAGCAGAATTCCACTTTTAGAGACC ATTATTTAGATTTGCCCTTTGACTTATCTAAAGTACTTTTTATAACCACAGCCAATACAACTGACACTATTCCCGCTCCT CTTTTGGACAGGATGGAAGTTATATACATATCAGGATACACTGAAGAGGAGAAGTTTCACATTGCTAAAGGCTATCTCAT ACCAAAGATTTTGAAAGAACACGGTGTTCCGGACAATAAAATAATAATACAGGACTCAGCCATTAAAGGAATTATTTCTG AATATACTCGTGAAGCAGGAGTGAGAGGGCTTGAGAAACACCTTGCCACAATTGTGAGAAAAGCCATTAGAAAGATAATG GAAGATAATGTGCCTTACGTGAAGGTAGGCAAAAAGAACTTGCAGTCTTACTTGGGCAAGCCTCTTTTTAGACCCGACAA AGCCAATGAAAAGAGCGAAATCGGAACGGTGATGGGCCTTGCGTGGACCAGAGTTGGAGGAGAAATTTTGACTGTAGAGG CTTCTATAATGCCAGGAAGCGGAAAATTAAACCTCACAGGTCAATTGGGGGATGTGATGAAAGAATCTGCTCAGGCGGGC CTTAGTTATATAAGAGCAAATGCTGAAAGACTTGGCATTGATAAAGATTTTTACAAAAATGTCGATATACATATACACGT GCCTGAAGGATCTATTCCAAAGGATGGACCTTCAGCGGGCGTTACCATGGTGACTGCTATGGTCTCAGCCCTTGTGAAAG TGCCTGTCAGAAAAGATGTCGCCATGACAGGGGAAATAACTTTAACTGGAAGAGTTTTGCCTATAGGCGGTGTGAAAGAA AAAGTTCTGGCAGCTCACAGAGCAGGCATAAAAAGAGTGATTCTCCCTATGGAAAACAAGAGAGATTTAGATGAAATTCC ACAGAGCGTAAAAAAGAAACTGGAGTTTAAATTTGTAGAAAGAATAGACGAGGTGTTGGAGTACGCTTTAGTCAAGGAGG AAAAACATGAAAATTAA
Upstream 100 bases:
>100_bases CATAAAAAATAAGTTTTTACATTAACTCCCCTTCTCCTTCACATACTAAAATAGTGAATGGGAAGGGGTTTGATTATATT GCGAAAAATGAGGTGAGGTC
Downstream 100 bases:
>100_bases AACAGCTGAGTTTGTAGGAAGTGCTTTTAATGAAAGTCAATATCCAAAGGATAAAATCCCCCAAATAGCAATTGTGGGAA AATCCAATGTGGGCAAGTCC
Product: ATP-dependent Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MAEKRYTLPMIPLRGLTIFPYMVIHFDIGREKSIRALEEAFMKNQLIFVTTQKDPELEDPSIEDVYKVGTITKVKQMLKL PGELIRILVEGISRAEIDKVTREDEFFEVEVVEKEEQAEIEKTPELEALMRSVVSAFEEYVNMTSRVPIESLYNVISIEE PGRLADMIAAHISLSTAQNQELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLREQLKAIKAEL GETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVRTYLDWILELPWNYETEDILDLKRAQRILD EDHYGLKKVKERIIEFLAVRAFYNKVKSPILCLVGPPGVGKTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGA IPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAP LLDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKGIISEYTREAGVRGLEKHLATIVRKAIRKIM EDNVPYVKVGKKNLQSYLGKPLFRPDKANEKSEIGTVMGLAWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAG LSYIRANAERLGIDKDFYKNVDIHIHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPIGGVKE KVLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYALVKEEKHEN
Sequences:
>Translated_778_residues MAEKRYTLPMIPLRGLTIFPYMVIHFDIGREKSIRALEEAFMKNQLIFVTTQKDPELEDPSIEDVYKVGTITKVKQMLKL PGELIRILVEGISRAEIDKVTREDEFFEVEVVEKEEQAEIEKTPELEALMRSVVSAFEEYVNMTSRVPIESLYNVISIEE PGRLADMIAAHISLSTAQNQELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLREQLKAIKAEL GETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVRTYLDWILELPWNYETEDILDLKRAQRILD EDHYGLKKVKERIIEFLAVRAFYNKVKSPILCLVGPPGVGKTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGA IPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAP LLDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKGIISEYTREAGVRGLEKHLATIVRKAIRKIM EDNVPYVKVGKKNLQSYLGKPLFRPDKANEKSEIGTVMGLAWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAG LSYIRANAERLGIDKDFYKNVDIHIHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPIGGVKE KVLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYALVKEEKHEN >Mature_777_residues AEKRYTLPMIPLRGLTIFPYMVIHFDIGREKSIRALEEAFMKNQLIFVTTQKDPELEDPSIEDVYKVGTITKVKQMLKLP GELIRILVEGISRAEIDKVTREDEFFEVEVVEKEEQAEIEKTPELEALMRSVVSAFEEYVNMTSRVPIESLYNVISIEEP GRLADMIAAHISLSTAQNQELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLREQLKAIKAELG ETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVRTYLDWILELPWNYETEDILDLKRAQRILDE DHYGLKKVKERIIEFLAVRAFYNKVKSPILCLVGPPGVGKTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAI PGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAPL LDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKGIISEYTREAGVRGLEKHLATIVRKAIRKIME DNVPYVKVGKKNLQSYLGKPLFRPDKANEKSEIGTVMGLAWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAGL SYIRANAERLGIDKDFYKNVDIHIHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPIGGVKEK VLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYALVKEEKHEN
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=829, Percent_Identity=38.962605548854, Blast_Score=575, Evalue=1e-164, Organism=Homo sapiens, GI31377667, Length=772, Percent_Identity=40.8031088082902, Blast_Score=570, Evalue=1e-162, Organism=Escherichia coli, GI1786643, Length=771, Percent_Identity=53.0479896238651, Blast_Score=835, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=700, Percent_Identity=42.4285714285714, Blast_Score=541, Evalue=1e-154, Organism=Caenorhabditis elegans, GI17556486, Length=789, Percent_Identity=35.9949302915082, Blast_Score=469, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6319449, Length=715, Percent_Identity=40.979020979021, Blast_Score=541, Evalue=1e-154, Organism=Drosophila melanogaster, GI221513036, Length=679, Percent_Identity=43.298969072165, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI24666867, Length=679, Percent_Identity=43.298969072165, Blast_Score=563, Evalue=1e-160,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 88086; Mature: 87954
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKRYTLPMIPLRGLTIFPYMVIHFDIGREKSIRALEEAFMKNQLIFVTTQKDPELEDP CCCCCCCCCCCCCCCHHHHCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC SIEDVYKVGTITKVKQMLKLPGELIRILVEGISRAEIDKVTREDEFFEVEVVEKEEQAEI CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH EKTPELEALMRSVVSAFEEYVNMTSRVPIESLYNVISIEEPGRLADMIAAHISLSTAQNQ HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCH ELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLREQLKAIKAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVRTYLDWILEL CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC PWNYETEDILDLKRAQRILDEDHYGLKKVKERIIEFLAVRAFYNKVKSPILCLVGPPGVG CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC KTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFL HHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEEEECCCCHHHHCEEEECCCCCEEE LDEIDKMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAP EHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCHH LLDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKGIISEYTREAG HHCCEEEEEEECCCCCCCEEHHHCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH VRGLEKHLATIVRKAIRKIMEDNVPYVKVGKKNLQSYLGKPLFRPDKANEKSEIGTVMGL HHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAGLSYIRANAERLGIDKDFYKN HHHHCCCEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC VDIHIHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPIGGVKE CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEEEEECCCHHH KVLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYALVKEEKHEN HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AEKRYTLPMIPLRGLTIFPYMVIHFDIGREKSIRALEEAFMKNQLIFVTTQKDPELEDP CCCCCCCCCCCCCCHHHHCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC SIEDVYKVGTITKVKQMLKLPGELIRILVEGISRAEIDKVTREDEFFEVEVVEKEEQAEI CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH EKTPELEALMRSVVSAFEEYVNMTSRVPIESLYNVISIEEPGRLADMIAAHISLSTAQNQ HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCH ELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLREQLKAIKAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVRTYLDWILEL CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC PWNYETEDILDLKRAQRILDEDHYGLKKVKERIIEFLAVRAFYNKVKSPILCLVGPPGVG CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC KTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFL HHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEEEECCCCHHHHCEEEECCCCCEEE LDEIDKMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAP EHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCHH LLDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKGIISEYTREAG HHCCEEEEEEECCCCCCCEEHHHCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH VRGLEKHLATIVRKAIRKIMEDNVPYVKVGKKNLQSYLGKPLFRPDKANEKSEIGTVMGL HHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAGLSYIRANAERLGIDKDFYKN HHHHCCCEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC VDIHIHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPIGGVKE CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEEEEECCCHHH KVLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYALVKEEKHEN HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA