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The map label for this gene is ydfK [H]

Identifier: 20807071

GI number: 20807071

Start: 576059

End: 576748

Strand: Direct

Name: ydfK [H]

Synonym: TTE0575

Alternate gene names: 20807071

Gene position: 576059-576748 (Clockwise)

Preceding gene: 20807070

Following gene: 20807073

Centisome position: 21.42

GC content: 36.38

Gene sequence:

>690_bases
ATGCTGGGAACAATCGTAAATTCAATTGCGATAATCGTCGGAGGGACGATTGGAACTCTTCTTAAGGTAGGGATTCCAGA
TAGGTTTAAAAATATAGTTATGCAGGGTGTGGCTTTAAGTGTGGCAATTATAGGAATTTCCAGTGGTCTTCAGTTTAATA
ACCTTATGTTGGTTATTATGAGTTTAGTGATAGGGGGAGTGATAGGAGAGGCTCTTGACATAGAAGGATATCTCAATAGG
TTAGGCGATACTCTTCAAAGGAAATTGAGTAAAGACAACGGTTCTACTATAAGCAAAGGATTTGTTACGGCGAGTTTGGT
GTACTGTGTAGGGGCAATGGCTATAGTTGGTTCCTTAAAAGAAGGGCTATCAGGAGACCACAGTATACTTTTTGCTAAAT
CTGTGTTAGATGGTATATCCTCTATAATTTTTGCTTCTACTTTTGGTGTTGGGGTAATTTTTTCAGCCATTTCTGTTTTT
TTATACCAAGGTTTTATTACAGTTGGGGCTTCCTTTTTACAAGGGCTTTTAATAAAGCCAGTAATTGATGACATGACAGC
TGTAGGAGGAATCTTGATATTCGCTATATCTTTGAATATGCTGGAGATTAAAAGTATAAAAGTTGGAAATTTACTGCCTT
CCATTTTTATACCCATTTTTTATCAGCTAATACTCAATCTCATAAGATAA

Upstream 100 bases:

>100_bases
TATTGACAAATTTGGAGACCTCTCTGGTTTTGCTCAACAGTATTTGTTCTACTATGGGAGAGAGATGGGGAAGAAAATAT
TTGGGGAAAGGAAGAAGTAA

Downstream 100 bases:

>100_bases
GGAGGGGGACACCCTCCTTAAACTTTTTTTAAAGCCTCTTCTATATTTATCATTCCACTTCCTTGTGTCCAAAGACCTGC
TTCGTTAATTTTTGTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLGTIVNSIAIIVGGTIGTLLKVGIPDRFKNIVMQGVALSVAIIGISSGLQFNNLMLVIMSLVIGGVIGEALDIEGYLNR
LGDTLQRKLSKDNGSTISKGFVTASLVYCVGAMAIVGSLKEGLSGDHSILFAKSVLDGISSIIFASTFGVGVIFSAISVF
LYQGFITVGASFLQGLLIKPVIDDMTAVGGILIFAISLNMLEIKSIKVGNLLPSIFIPIFYQLILNLIR

Sequences:

>Translated_229_residues
MLGTIVNSIAIIVGGTIGTLLKVGIPDRFKNIVMQGVALSVAIIGISSGLQFNNLMLVIMSLVIGGVIGEALDIEGYLNR
LGDTLQRKLSKDNGSTISKGFVTASLVYCVGAMAIVGSLKEGLSGDHSILFAKSVLDGISSIIFASTFGVGVIFSAISVF
LYQGFITVGASFLQGLLIKPVIDDMTAVGGILIFAISLNMLEIKSIKVGNLLPSIFIPIFYQLILNLIR
>Mature_229_residues
MLGTIVNSIAIIVGGTIGTLLKVGIPDRFKNIVMQGVALSVAIIGISSGLQFNNLMLVIMSLVIGGVIGEALDIEGYLNR
LGDTLQRKLSKDNGSTISKGFVTASLVYCVGAMAIVGSLKEGLSGDHSILFAKSVLDGISSIIFASTFGVGVIFSAISVF
LYQGFITVGASFLQGLLIKPVIDDMTAVGGILIFAISLNMLEIKSIKVGNLLPSIFIPIFYQLILNLIR

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=168, Percent_Identity=25.5952380952381, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24055; Mature: 24055

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTIVNSIAIIVGGTIGTLLKVGIPDRFKNIVMQGVALSVAIIGISSGLQFNNLMLVIM
CCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLVIGGVIGEALDIEGYLNRLGDTLQRKLSKDNGSTISKGFVTASLVYCVGAMAIVGSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGLSGDHSILFAKSVLDGISSIIFASTFGVGVIFSAISVFLYQGFITVGASFLQGLLIKP
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIDDMTAVGGILIFAISLNMLEIKSIKVGNLLPSIFIPIFYQLILNLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLGTIVNSIAIIVGGTIGTLLKVGIPDRFKNIVMQGVALSVAIIGISSGLQFNNLMLVIM
CCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLVIGGVIGEALDIEGYLNRLGDTLQRKLSKDNGSTISKGFVTASLVYCVGAMAIVGSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGLSGDHSILFAKSVLDGISSIIFASTFGVGVIFSAISVFLYQGFITVGASFLQGLLIKP
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIDDMTAVGGILIFAISLNMLEIKSIKVGNLLPSIFIPIFYQLILNLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]