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The map label for this gene is ydjZ [H]

Identifier: 20807030

GI number: 20807030

Start: 536091

End: 536762

Strand: Direct

Name: ydjZ [H]

Synonym: TTE0529

Alternate gene names: 20807030

Gene position: 536091-536762 (Clockwise)

Preceding gene: 20807029

Following gene: 20807031

Centisome position: 19.93

GC content: 34.08

Gene sequence:

>672_bases
ATGAAAAATGTGACTGTTAACCTTTTGCTCATACTTATTTTTGTCCTAATAATTTTAATTTTATCTGTAGCTTATGCGAA
GGAAATTACACTTCTTGTGAGCAATCCTGAGAAATTTAGAAATTGGATAAATAGCTTTGGAAGTTTGGGTGTTTTGATAT
TTATAAGTATACAGGTTTTTCAAGTGGTAGTGTTTGTAATACCGGGAGAAGTGGTGCAAGTCGCAGGTGGATACCTTTAT
GGTACGATTTTAGGGACTTTGTACTCTGTAATAGGCATTACACTAGGCTCTCTTATTTGCTTTTCAATTGCTAGGATTTT
GGGATATGATTTTGTGAAAAACATTGTGTCGGAGGAGAAACTTAAAAAATTTGACTATATTATAAACAACCCTAAAGGAG
AAATAGTTTTGTTTTTGTTATTTTTCCTTCCAGGAATGCCAAAGGATGCTCTTTCTTACATCGCTGGCATTACTCCTGTT
AAGTTTTACAATTTCTTTATAATAACTCTTTTTGCAAGGCTGCCGGGCATATTCTTTTCTGCCTATATAGGGTCAAATTT
GGGAAGTAAAAATTATCTTATGGCTGGCTTAGTGGCCATTGTAGCGCTAGTATTGTTTTTGGCAGGAGTGTATAAAAGAG
ATGTGATTATTGAGAAATTGAGAAGGATATGA

Upstream 100 bases:

>100_bases
GCCTGCTGGGGCTGGGAAAGTCTGAAGGGCGGACTACAAATACCCCAGCTATCTAAACTGTACATTTTTGTACAGTTTGG
GTAACCAGGAGTACATCAGG

Downstream 100 bases:

>100_bases
GATAAGGATTTCATAAATAGATTTTCTTGTGGTATAATTGTTATTGTATTACAAAAACAGGGGGGAATTATATGTACCTT
TTAAAAGGCGGAAGAGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKNVTVNLLLILIFVLIILILSVAYAKEITLLVSNPEKFRNWINSFGSLGVLIFISIQVFQVVVFVIPGEVVQVAGGYLY
GTILGTLYSVIGITLGSLICFSIARILGYDFVKNIVSEEKLKKFDYIINNPKGEIVLFLLFFLPGMPKDALSYIAGITPV
KFYNFFIITLFARLPGIFFSAYIGSNLGSKNYLMAGLVAIVALVLFLAGVYKRDVIIEKLRRI

Sequences:

>Translated_223_residues
MKNVTVNLLLILIFVLIILILSVAYAKEITLLVSNPEKFRNWINSFGSLGVLIFISIQVFQVVVFVIPGEVVQVAGGYLY
GTILGTLYSVIGITLGSLICFSIARILGYDFVKNIVSEEKLKKFDYIINNPKGEIVLFLLFFLPGMPKDALSYIAGITPV
KFYNFFIITLFARLPGIFFSAYIGSNLGSKNYLMAGLVAIVALVLFLAGVYKRDVIIEKLRRI
>Mature_223_residues
MKNVTVNLLLILIFVLIILILSVAYAKEITLLVSNPEKFRNWINSFGSLGVLIFISIQVFQVVVFVIPGEVVQVAGGYLY
GTILGTLYSVIGITLGSLICFSIARILGYDFVKNIVSEEKLKKFDYIINNPKGEIVLFLLFFLPGMPKDALSYIAGITPV
KFYNFFIITLFARLPGIFFSAYIGSNLGSKNYLMAGLVAIVALVLFLAGVYKRDVIIEKLRRI

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=191, Percent_Identity=27.2251308900524, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24807; Mature: 24807

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVTVNLLLILIFVLIILILSVAYAKEITLLVSNPEKFRNWINSFGSLGVLIFISIQVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH
QVVVFVIPGEVVQVAGGYLYGTILGTLYSVIGITLGSLICFSIARILGYDFVKNIVSEEK
HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKFDYIINNPKGEIVLFLLFFLPGMPKDALSYIAGITPVKFYNFFIITLFARLPGIFFS
HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AYIGSNLGSKNYLMAGLVAIVALVLFLAGVYKRDVIIEKLRRI
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNVTVNLLLILIFVLIILILSVAYAKEITLLVSNPEKFRNWINSFGSLGVLIFISIQVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH
QVVVFVIPGEVVQVAGGYLYGTILGTLYSVIGITLGSLICFSIARILGYDFVKNIVSEEK
HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKFDYIINNPKGEIVLFLLFFLPGMPKDALSYIAGITPVKFYNFFIITLFARLPGIFFS
HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AYIGSNLGSKNYLMAGLVAIVALVLFLAGVYKRDVIIEKLRRI
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]