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The map label for this gene is 20807028

Identifier: 20807028

GI number: 20807028

Start: 533932

End: 534522

Strand: Direct

Name: 20807028

Synonym: TTE0527

Alternate gene names: NA

Gene position: 533932-534522 (Clockwise)

Preceding gene: 20807027

Following gene: 20807029

Centisome position: 19.85

GC content: 33.33

Gene sequence:

>591_bases
ATGTTATTAACTATAAAAAAGGTTAAAGAGCTGTATGATATAAGCAGAATTACATTAATAAACTGGGAAAAGGAAGGATT
AATAACCCCAGTTAGAACACCAAAAGGAAGAAGAAGGTACAAAAAAGAAGATATAGAGAAGTTATTAGGCATGCTGGAAG
AAAAACCAAAACCTAAAGTAGTTTTGTATGCAAGAGTGTCCACAAAGAAACAAGAAGAATATCTTAAGAATCAAATTAGA
AGGCTTGAAGAATACGCTAATTCCCAAGGATGGCAGTATGAAGTCATATCCGAAATAGCAAGCGGAGTAAATGAAAATAG
AAGAGGCTTATTAAAGCTTTTGAACAAGATAAAAAGAGGAGAAGTTGAAAAAGTTGTAATAGAATATCCTGATAGACTAG
CGAGATTTGGCTTTGAATATCTTAAATTTTTCATGGAAAGCTTTGGGGTAGAGCTTATAGTTTTAAACGGGAAAGAAAAC
GAAGAAGATGCAAATAAAGAACTAGCAGAAGACTTAATAGCAATAGTAACATCTTTCGCAGCAAGAATTTACGGGCAAAG
GGGCAAAAAACATGATAGTGATACAGGCTAA

Upstream 100 bases:

>100_bases
AATAGAGTATTAATCTGGTGAGAGAATTTATAGGATTTGGAGGTCAAAACAGTTGAAATTAGTAGTAAAAAATGATATAA
TTTTAATTGGGTGATGATGA

Downstream 100 bases:

>100_bases
ATTCATTTTTCTAAATCAAGAAGACAAACAAATAGTATTAAACTTAATGAGAAGATGGTCATCCTGCATGAGATTTGCAT
ACAAGAGACTTTTAGAGGGT

Product: site-specific integrase-resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLLTIKKVKELYDISRITLINWEKEGLITPVRTPKGRRRYKKEDIEKLLGMLEEKPKPKVVLYARVSTKKQEEYLKNQIR
RLEEYANSQGWQYEVISEIASGVNENRRGLLKLLNKIKRGEVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKEN
EEDANKELAEDLIAIVTSFAARIYGQRGKKHDSDTG

Sequences:

>Translated_196_residues
MLLTIKKVKELYDISRITLINWEKEGLITPVRTPKGRRRYKKEDIEKLLGMLEEKPKPKVVLYARVSTKKQEEYLKNQIR
RLEEYANSQGWQYEVISEIASGVNENRRGLLKLLNKIKRGEVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKEN
EEDANKELAEDLIAIVTSFAARIYGQRGKKHDSDTG
>Mature_196_residues
MLLTIKKVKELYDISRITLINWEKEGLITPVRTPKGRRRYKKEDIEKLLGMLEEKPKPKVVLYARVSTKKQEEYLKNQIR
RLEEYANSQGWQYEVISEIASGVNENRRGLLKLLNKIKRGEVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKEN
EEDANKELAEDLIAIVTSFAARIYGQRGKKHDSDTG

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22899; Mature: 22899

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50937 HTH_MERR_2 ; PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTIKKVKELYDISRITLINWEKEGLITPVRTPKGRRRYKKEDIEKLLGMLEEKPKPKV
CEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
VLYARVSTKKQEEYLKNQIRRLEEYANSQGWQYEVISEIASGVNENRRGLLKLLNKIKRG
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
EVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKENEEDANKELAEDLIAIVTSFA
CHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
ARIYGQRGKKHDSDTG
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLLTIKKVKELYDISRITLINWEKEGLITPVRTPKGRRRYKKEDIEKLLGMLEEKPKPKV
CEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
VLYARVSTKKQEEYLKNQIRRLEEYANSQGWQYEVISEIASGVNENRRGLLKLLNKIKRG
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
EVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKENEEDANKELAEDLIAIVTSFA
CHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
ARIYGQRGKKHDSDTG
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]