Click here to switch to the map view.

The map label for this gene is yrxA [H]

Identifier: 20807021

GI number: 20807021

Start: 527060

End: 527575

Strand: Direct

Name: yrxA [H]

Synonym: TTE0520

Alternate gene names: 20807021

Gene position: 527060-527575 (Clockwise)

Preceding gene: 20807020

Following gene: 20807022

Centisome position: 19.6

GC content: 39.34

Gene sequence:

>516_bases
ATGACGGCGAAGGAGAGAAGGGAAAAAATACTTGAGATTTTAAAAGCGGCTAAAGAGCCTATTTCTGGTTCTGAGCTTGC
CAAAATTTTTGGAGTTACAAGACAGATAATAGTTCAAGATATAGCCATTTTAAGAGCCAAAGGTAGCAGGATAATTTCTA
CTCCTCAAGGGTATATAGTAGACCTTGTGAGAGAAGGCACAAAGAAAAGGGTTTTTGCTGTAAAACACGGGTATGAGAGG
ACAGAAGAGGAGCTAAACTTAATAGTTGACAATGGGGGGAAAGTACTGGACGTTATTGTGGAGCATCCTTACTATGGAGA
GTTAAAAGGGCTTTTAATGCTTTCCTCCAGGTACGATGTTGCAAAATTTATGGAGGTTATAAAAAAAGAAAAGGCAGCGC
TTTTGTCTTCTCTTACAGGAGGAGTGCATCTTCATACTGTAGAGGCAGAAAGCGATGAAGCTCTTGACAGAATAGAAAAA
GCGCTAAGAGATAGGGGTTTTTTAATAGAGGAATAA

Upstream 100 bases:

>100_bases
CCATATCCTCTTCCCAAGGCTTTTAGTGTAGGAGATTTGCTGATGGCTGTGGGCATTTTCTGGCTTATTACAGATGCGAT
GCTGGGCAGGGTGAAAAAGT

Downstream 100 bases:

>100_bases
AAATTTTAATTTTATATTGACAGCTGTATATACACCTGTGTATACTGTAGTTGTGAGGATATATACAGGGAGGTATTTGA
TGATGAAAGCAAAAGAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTAKERREKILEILKAAKEPISGSELAKIFGVTRQIIVQDIAILRAKGSRIISTPQGYIVDLVREGTKKRVFAVKHGYER
TEEELNLIVDNGGKVLDVIVEHPYYGELKGLLMLSSRYDVAKFMEVIKKEKAALLSSLTGGVHLHTVEAESDEALDRIEK
ALRDRGFLIEE

Sequences:

>Translated_171_residues
MTAKERREKILEILKAAKEPISGSELAKIFGVTRQIIVQDIAILRAKGSRIISTPQGYIVDLVREGTKKRVFAVKHGYER
TEEELNLIVDNGGKVLDVIVEHPYYGELKGLLMLSSRYDVAKFMEVIKKEKAALLSSLTGGVHLHTVEAESDEALDRIEK
ALRDRGFLIEE
>Mature_170_residues
TAKERREKILEILKAAKEPISGSELAKIFGVTRQIIVQDIAILRAKGSRIISTPQGYIVDLVREGTKKRVFAVKHGYERT
EEELNLIVDNGGKVLDVIVEHPYYGELKGLLMLSSRYDVAKFMEVIKKEKAALLSSLTGGVHLHTVEAESDEALDRIEKA
LRDRGFLIEE

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19203; Mature: 19071

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKERREKILEILKAAKEPISGSELAKIFGVTRQIIVQDIAILRAKGSRIISTPQGYIV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
DLVREGTKKRVFAVKHGYERTEEELNLIVDNGGKVLDVIVEHPYYGELKGLLMLSSRYDV
HHHHCCCHHHEEHHHCCCHHHHHHHEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCH
AKFMEVIKKEKAALLSSLTGGVHLHTVEAESDEALDRIEKALRDRGFLIEE
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAKERREKILEILKAAKEPISGSELAKIFGVTRQIIVQDIAILRAKGSRIISTPQGYIV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
DLVREGTKKRVFAVKHGYERTEEELNLIVDNGGKVLDVIVEHPYYGELKGLLMLSSRYDV
HHHHCCCHHHEEHHHCCCHHHHHHHEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCH
AKFMEVIKKEKAALLSSLTGGVHLHTVEAESDEALDRIEKALRDRGFLIEE
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]