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The map label for this gene is rpfG [H]

Identifier: 20807019

GI number: 20807019

Start: 525246

End: 526520

Strand: Direct

Name: rpfG [H]

Synonym: TTE0518

Alternate gene names: 20807019

Gene position: 525246-526520 (Clockwise)

Preceding gene: 20807018

Following gene: 20807020

Centisome position: 19.53

GC content: 34.67

Gene sequence:

>1275_bases
ATGTTAAACAAAAGAGTAAAAGTGTATATTTCTATAATAATTGCTTTAGGAATTTCTTTCCTTATATATTCTATGCTAAG
AACTTCAAAAAATACAATTCCAGATATAATTTTATTTGGTTTTTTTGCTGCATTAGCTGAATCAATGCCAGTATACATTG
CTAAAGAAATTACTGTTTCTGTGGCATTTGCTGTAGATTTAATGGCTCTACTCATTTTTGGACCTTATGGTGGTGCTTTA
ATTGCTTCTATGGGTACAGCATTTCAAATTGTTAAAAGTGAAGATGGTACTTTGAGGCATATATTCAACTTGCCCTACTA
TAAGACGTTATTTAACATAAGTGAACTGGCTTTAAGCGTGGGAATTGCAGGTTTAGTATTTGAATATACAGGAGGAGTTG
CAGGCACTTACATATATCCTAAATATCTTATACCTGCAGTGATAGCTGCTTCAGTATATTATCTTCTTAATACCTCAATT
ATAGCAATATTATTGTCACTACTTACTAATAAATCTCTCAGTTATGTTATAATGAAAGAAATTAAATGGATGGTTCCTAA
TTTCCTCTTTCTAGCCTTTTTAGGTATTGTCATGACAGAGGCATTTGTGAGAATTGGTTACATAAGCTTTGTACTCCTTT
TTATTCCTCTATTTATGGTTCGCTATATGTTTAAGCTTTACATAGACTTAAAACAGTCTTACTATGACACAATAAATGTG
CTTATGAAGGCGCTTGATGCGAAGGACAAATACACAGCAGGTCATTCTCAGAGCGTTGAAAGAATTGCTGCCCTTCTTTC
AAGGGAGCTAGGGCTTAGTGAATCTCATATTGAGAGAATTAGAATTGCAGCACTTTTACACGATATAGGAAAGATTGGAG
TTAAAGAGGAGGTTTTAAATAAACCCGGGAAGCTGACTGATGAAGAGATGAACCTTATAAGAGAACACCCTGTGAAGGGA
TATGAGATTTTAAGTGAAGTTCCATCGTTAAAGGATGTAGCTTTGTGGGTAAGATATCATCATGAATGGTACAATGGCAG
TGGATATCCAGATGGGTTAAAAGGAGAAGAAATTCCGCTTGAAGCTCAGATACTTTCTTTGGCTGATGTTTTTGATGCTT
TAGTTTCAGACAGACCTTATCGAGATGCTTTTTCTCAGGAAGAGGCTTATAAGATAATTTTAGATCATGAAGGAACGCAG
TTCAGTCCAAAACTCATAGATGCCTTTAAGAAAGCCTTTGAAAAGCACAGGGAGGAATTTAAGCATGATATTTGA

Upstream 100 bases:

>100_bases
ACTCTTGGCTTTAATGGCACTTGCATTAGCAGGAGGCGCAAATTTAACATGGCACTAAGCGGTTTGTGGTGTGCTTTTTG
AAGAAAAGAGGAGGTTTAAT

Downstream 100 bases:

>100_bases
TTCACTTGGAGCTTCTCTAATTTACGGACTTTTGAGAAGGGGGAAGATAAGCGGAATAGGGGACATTGTAATAAAAAAGA
TGGATTTTTTTATAGCCGCT

Product: HD-GYP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MLNKRVKVYISIIIALGISFLIYSMLRTSKNTIPDIILFGFFAALAESMPVYIAKEITVSVAFAVDLMALLIFGPYGGAL
IASMGTAFQIVKSEDGTLRHIFNLPYYKTLFNISELALSVGIAGLVFEYTGGVAGTYIYPKYLIPAVIAASVYYLLNTSI
IAILLSLLTNKSLSYVIMKEIKWMVPNFLFLAFLGIVMTEAFVRIGYISFVLLFIPLFMVRYMFKLYIDLKQSYYDTINV
LMKALDAKDKYTAGHSQSVERIAALLSRELGLSESHIERIRIAALLHDIGKIGVKEEVLNKPGKLTDEEMNLIREHPVKG
YEILSEVPSLKDVALWVRYHHEWYNGSGYPDGLKGEEIPLEAQILSLADVFDALVSDRPYRDAFSQEEAYKIILDHEGTQ
FSPKLIDAFKKAFEKHREEFKHDI

Sequences:

>Translated_424_residues
MLNKRVKVYISIIIALGISFLIYSMLRTSKNTIPDIILFGFFAALAESMPVYIAKEITVSVAFAVDLMALLIFGPYGGAL
IASMGTAFQIVKSEDGTLRHIFNLPYYKTLFNISELALSVGIAGLVFEYTGGVAGTYIYPKYLIPAVIAASVYYLLNTSI
IAILLSLLTNKSLSYVIMKEIKWMVPNFLFLAFLGIVMTEAFVRIGYISFVLLFIPLFMVRYMFKLYIDLKQSYYDTINV
LMKALDAKDKYTAGHSQSVERIAALLSRELGLSESHIERIRIAALLHDIGKIGVKEEVLNKPGKLTDEEMNLIREHPVKG
YEILSEVPSLKDVALWVRYHHEWYNGSGYPDGLKGEEIPLEAQILSLADVFDALVSDRPYRDAFSQEEAYKIILDHEGTQ
FSPKLIDAFKKAFEKHREEFKHDI
>Mature_424_residues
MLNKRVKVYISIIIALGISFLIYSMLRTSKNTIPDIILFGFFAALAESMPVYIAKEITVSVAFAVDLMALLIFGPYGGAL
IASMGTAFQIVKSEDGTLRHIFNLPYYKTLFNISELALSVGIAGLVFEYTGGVAGTYIYPKYLIPAVIAASVYYLLNTSI
IAILLSLLTNKSLSYVIMKEIKWMVPNFLFLAFLGIVMTEAFVRIGYISFVLLFIPLFMVRYMFKLYIDLKQSYYDTINV
LMKALDAKDKYTAGHSQSVERIAALLSRELGLSESHIERIRIAALLHDIGKIGVKEEVLNKPGKLTDEEMNLIREHPVKG
YEILSEVPSLKDVALWVRYHHEWYNGSGYPDGLKGEEIPLEAQILSLADVFDALVSDRPYRDAFSQEEAYKIILDHEGTQ
FSPKLIDAFKKAFEKHREEFKHDI

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47899; Mature: 47899

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]