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The map label for this gene is FliD [H]

Identifier: 20807009

GI number: 20807009

Start: 515445

End: 517034

Strand: Direct

Name: FliD [H]

Synonym: TTE0505

Alternate gene names: 20807009

Gene position: 515445-517034 (Clockwise)

Preceding gene: 20807008

Following gene: 20807010

Centisome position: 19.17

GC content: 36.86

Gene sequence:

>1590_bases
ATGGATCCCATTGGTATGAACAGTTATAATGTGAGCAATTTACTAAGAATAGGTGGACTTGCTACAGGGCTGGATACTGA
TTCAATAGTTAAACAGCTTATGAAAGTGGCAAGTTTACCTCTTGATAAGTTGAATCAGCAAAAGCAGTGGTATCAGTGGC
AGCAGGAAGATTTGAGGGACATAAACGCAAAACTTATGAATTTGAGAAATAATGTGGTCGCCAGTTTGAGGCTGCAGGGA
ACCTTTATGGCTAAAACTGTTACATCCTCTAATACTTCTGTTGCTACTGCTACAGCGGGGACAAATGCGGTGAATGGGAC
ATATACTTTATCTGTTACTCAGTTAGCTACAGCTGCTTCTACTGCCAGTACCGACAAGATTGGGGCGTATTATATCGACA
GTAACAATAAGATTCAATATAATCCTCTAAATACCACTGGGGGACCTATAACTCTCGTACTGAAAAATAAAGACGGGAAA
ACTTTTTCAAATATTACAATATCAACGAATGCAAATATTAATGATGTAATATCAGCTATAAATTCTGTCTCTAAAGATAC
AGGCATAGTTGCTACTTATGATCAAAATTTAGATAGGTTGTTTTTAGTTTCTAATGTGACGGGTAGTTCTTCTACAATTG
ATTTTAGTGCTACTACTGATCAGACGGCACAAAATTTTTTGACATCAGTTTTAAAATTACCTTCAGATGTTTTGACTTCT
GGAAAAATAACAGGGCAAGATGCAATATTTACTTTCAATGGCGTTCAAATAACTAGCTCTACTAATAATGTTACAGTTGC
TGGTATAAACGTTACATTGACAGGTACAACTGCGGGCGGGCAGAATATAACTCTCACTGTTTCAACAGACGTAGATAAAA
TTTATAACACGATTAAAAACTTTGTAGATACCTATAACGACGTAATTACACAGATGTACACTAAACTCACAGAAAAAAGG
TATTACGATTATCCGCCTCTCACAGATGAGCAGAAGCAGGCGATGAAGGAAAATGACATAAAATTGTGGGAAGAAAAAGC
TAGATCTGGTAACTTAGCTAATGACGAGACTTTAATGAGAGCGTATTATTCATTAAGACAGGTCGTTTCTTCTACTGTAT
CTGGCGTAGGGTCATTAAGCTCTATTGGAATTACTACAGGTCAGTGGTATGAAGGTGGAAAACTTTATATTGACGAAGCT
AAATTAAAAGATGCGATTGCCAACAATCTTGATAAGGTTATGCAGATATTTACAGGTGTTTACAGCTCTGATGGCACTAC
ATTGGTGTCAAAAGGCATTGCACAGCAACTTTATGGCTATTTTGAAAATGGCACATTTAAAGAAGGTGTACTAGGGACTG
CAATAAATGCTATAACGCGCAAAGCAGGAAGCTCAACACAACTTTATGACAATAGCTTCATAGGCAATAGAATCAGAGAG
ATAGATGACAGAATTGCAGAAATGCAAAAAAGATTAAAGGATTTAGAGGAGAGATATTACAGGCAGTTTACACAGTTAGA
AATTTTTGTCGGGCAGATGAATACGCAAAGCGCATGGTTAAATCAGCAGATTGGGATTATGACTAAGTGA

Upstream 100 bases:

>100_bases
TATAGATGAGATTCCTCCGGAGAAAATATTGGACCTTGTAGCAGGTTTGTGGAAAATAGCAGGGCTTTTTGTGGATAGGA
AAATATAGGGGGGTGTAGTT

Downstream 100 bases:

>100_bases
GGGGGTGCGAAAGTTTGAATCCGTATCAGCAGTATAAAGAGAATGCTATTTTGACGGCAAGTCCTGAAGAGCTGGTTTTG
ATGCTCTATAACGGGATAAT

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MDPIGMNSYNVSNLLRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRDINAKLMNLRNNVVASLRLQG
TFMAKTVTSSNTSVATATAGTNAVNGTYTLSVTQLATAASTASTDKIGAYYIDSNNKIQYNPLNTTGGPITLVLKNKDGK
TFSNITISTNANINDVISAINSVSKDTGIVATYDQNLDRLFLVSNVTGSSSTIDFSATTDQTAQNFLTSVLKLPSDVLTS
GKITGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTAGGQNITLTVSTDVDKIYNTIKNFVDTYNDVITQMYTKLTEKR
YYDYPPLTDEQKQAMKENDIKLWEEKARSGNLANDETLMRAYYSLRQVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDEA
KLKDAIANNLDKVMQIFTGVYSSDGTTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIRE
IDDRIAEMQKRLKDLEERYYRQFTQLEIFVGQMNTQSAWLNQQIGIMTK

Sequences:

>Translated_529_residues
MDPIGMNSYNVSNLLRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRDINAKLMNLRNNVVASLRLQG
TFMAKTVTSSNTSVATATAGTNAVNGTYTLSVTQLATAASTASTDKIGAYYIDSNNKIQYNPLNTTGGPITLVLKNKDGK
TFSNITISTNANINDVISAINSVSKDTGIVATYDQNLDRLFLVSNVTGSSSTIDFSATTDQTAQNFLTSVLKLPSDVLTS
GKITGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTAGGQNITLTVSTDVDKIYNTIKNFVDTYNDVITQMYTKLTEKR
YYDYPPLTDEQKQAMKENDIKLWEEKARSGNLANDETLMRAYYSLRQVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDEA
KLKDAIANNLDKVMQIFTGVYSSDGTTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIRE
IDDRIAEMQKRLKDLEERYYRQFTQLEIFVGQMNTQSAWLNQQIGIMTK
>Mature_529_residues
MDPIGMNSYNVSNLLRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRDINAKLMNLRNNVVASLRLQG
TFMAKTVTSSNTSVATATAGTNAVNGTYTLSVTQLATAASTASTDKIGAYYIDSNNKIQYNPLNTTGGPITLVLKNKDGK
TFSNITISTNANINDVISAINSVSKDTGIVATYDQNLDRLFLVSNVTGSSSTIDFSATTDQTAQNFLTSVLKLPSDVLTS
GKITGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTAGGQNITLTVSTDVDKIYNTIKNFVDTYNDVITQMYTKLTEKR
YYDYPPLTDEQKQAMKENDIKLWEEKARSGNLANDETLMRAYYSLRQVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDEA
KLKDAIANNLDKVMQIFTGVYSSDGTTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIRE
IDDRIAEMQKRLKDLEERYYRQFTQLEIFVGQMNTQSAWLNQQIGIMTK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=328, Percent_Identity=27.1341463414634, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 58033; Mature: 58033

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPIGMNSYNVSNLLRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRD
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHH
INAKLMNLRNNVVASLRLQGTFMAKTVTSSNTSVATATAGTNAVNGTYTLSVTQLATAAS
HHHHHHHHHHHHEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEHHHHHHHHC
TASTDKIGAYYIDSNNKIQYNPLNTTGGPITLVLKNKDGKTFSNITISTNANINDVISAI
CCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHH
NSVSKDTGIVATYDQNLDRLFLVSNVTGSSSTIDFSATTDQTAQNFLTSVLKLPSDVLTS
HHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCC
GKITGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTAGGQNITLTVSTDVDKIYNTIKN
CCCCCCCEEEEECCEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHH
FVDTYNDVITQMYTKLTEKRYYDYPPLTDEQKQAMKENDIKLWEEKARSGNLANDETLMR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHH
AYYSLRQVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDEAKLKDAIANNLDKVMQIFTGV
HHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
YSSDGTTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIRE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHH
IDDRIAEMQKRLKDLEERYYRQFTQLEIFVGQMNTQSAWLNQQIGIMTK
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MDPIGMNSYNVSNLLRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRD
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHH
INAKLMNLRNNVVASLRLQGTFMAKTVTSSNTSVATATAGTNAVNGTYTLSVTQLATAAS
HHHHHHHHHHHHEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEHHHHHHHHC
TASTDKIGAYYIDSNNKIQYNPLNTTGGPITLVLKNKDGKTFSNITISTNANINDVISAI
CCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHH
NSVSKDTGIVATYDQNLDRLFLVSNVTGSSSTIDFSATTDQTAQNFLTSVLKLPSDVLTS
HHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCC
GKITGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTAGGQNITLTVSTDVDKIYNTIKN
CCCCCCCEEEEECCEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHH
FVDTYNDVITQMYTKLTEKRYYDYPPLTDEQKQAMKENDIKLWEEKARSGNLANDETLMR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHH
AYYSLRQVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDEAKLKDAIANNLDKVMQIFTGV
HHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
YSSDGTTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIRE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHH
IDDRIAEMQKRLKDLEERYYRQFTQLEIFVGQMNTQSAWLNQQIGIMTK
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]