Click here to switch to the map view.

The map label for this gene is yrbG [H]

Identifier: 20806982

GI number: 20806982

Start: 488852

End: 489526

Strand: Reverse

Name: yrbG [H]

Synonym: TTE0476

Alternate gene names: 20806982

Gene position: 489526-488852 (Counterclockwise)

Preceding gene: 20806989

Following gene: 20806981

Centisome position: 18.2

GC content: 38.67

Gene sequence:

>675_bases
ATGCTAATACTTTTTTTCCGCACACTAATCTTATATGCCCTAGTGGTAGTATTTATGAGAATTTCTGGAAAACAGCAAAT
AGGACAGCTTCAGCCCTATGAACTGGTAGTAGCAATAATGATAGCAGACCTGGTAGCAATACCAATGCAGAACAAGGGAA
TACCTCTTGTCGCAGGTATTATACCTGTCCTCACTCTTTTAATATCCCAGCTCGTCCTTTCGTACCTCTCAATGAAAAGC
CTAAGAGCCAGAGTTATAATCTGCGGCACCCCTACAATTTTAATTGAAAAGGGTAAGATCTTAACTTCACAGCTTCAAAA
AGAAAGGTATAATATAAACGACCTGTTAGAAGAGCTTAGAGTGAAAGGCTATCCCAATATAGCAGATGTGGAATATGCTA
TTTTAGAAACAAACGGGAGTCTGAGTGTCATCCCTAAAAGTGATAAAAGACCTGTTACTCCAAAAGATTTGAATATAACA
CCTGAGTACGAAGGGTTGCCCCTTCCTATAATAATCGACGGAAGAATTATGCATCAGAATATGCAAAAAGCAGGCATTGA
CCTTGCATGGCTTGATGAGCAGCTTAAAATTTGGAACATAAAAAGTGTGAAAGAAGTATTATTTGCCTCCCTTGACTCTA
ACAAAGTGCTGACAGTGTATAAGAAGGAGGGATAA

Upstream 100 bases:

>100_bases
TTTTAACGAATTTTCTTTCCATAAAATGAATTAAATGTAAGTGAATATTTCTGAAAAATGCCATAAATACTATATATGAA
AAGGAGGAAAGGGTGAAAAC

Downstream 100 bases:

>100_bases
AATGAGATATGTCACCCCTTTAGTGGTTTTCCTCCTAGTTTTTATATTTTTTCTAGACTTTGCATCAATTAAATATTTAG
ACAGCACTTCTCAGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLILFFRTLILYALVVVFMRISGKQQIGQLQPYELVVAIMIADLVAIPMQNKGIPLVAGIIPVLTLLISQLVLSYLSMKS
LRARVIICGTPTILIEKGKILTSQLQKERYNINDLLEELRVKGYPNIADVEYAILETNGSLSVIPKSDKRPVTPKDLNIT
PEYEGLPLPIIIDGRIMHQNMQKAGIDLAWLDEQLKIWNIKSVKEVLFASLDSNKVLTVYKKEG

Sequences:

>Translated_224_residues
MLILFFRTLILYALVVVFMRISGKQQIGQLQPYELVVAIMIADLVAIPMQNKGIPLVAGIIPVLTLLISQLVLSYLSMKS
LRARVIICGTPTILIEKGKILTSQLQKERYNINDLLEELRVKGYPNIADVEYAILETNGSLSVIPKSDKRPVTPKDLNIT
PEYEGLPLPIIIDGRIMHQNMQKAGIDLAWLDEQLKIWNIKSVKEVLFASLDSNKVLTVYKKEG
>Mature_224_residues
MLILFFRTLILYALVVVFMRISGKQQIGQLQPYELVVAIMIADLVAIPMQNKGIPLVAGIIPVLTLLISQLVLSYLSMKS
LRARVIICGTPTILIEKGKILTSQLQKERYNINDLLEELRVKGYPNIADVEYAILETNGSLSVIPKSDKRPVTPKDLNIT
PEYEGLPLPIIIDGRIMHQNMQKAGIDLAWLDEQLKIWNIKSVKEVLFASLDSNKVLTVYKKEG

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=144, Percent_Identity=25.6944444444444, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 25168; Mature: 25168

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILFFRTLILYALVVVFMRISGKQQIGQLQPYELVVAIMIADLVAIPMQNKGIPLVAGI
CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IPVLTLLISQLVLSYLSMKSLRARVIICGTPTILIEKGKILTSQLQKERYNINDLLEELR
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHCCCHHHHHHHHH
VKGYPNIADVEYAILETNGSLSVIPKSDKRPVTPKDLNITPEYEGLPLPIIIDGRIMHQN
HCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
MQKAGIDLAWLDEQLKIWNIKSVKEVLFASLDSNKVLTVYKKEG
HHHHCCEEEEECCCCEEECHHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MLILFFRTLILYALVVVFMRISGKQQIGQLQPYELVVAIMIADLVAIPMQNKGIPLVAGI
CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IPVLTLLISQLVLSYLSMKSLRARVIICGTPTILIEKGKILTSQLQKERYNINDLLEELR
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHCCCHHHHHHHHH
VKGYPNIADVEYAILETNGSLSVIPKSDKRPVTPKDLNITPEYEGLPLPIIIDGRIMHQN
HCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
MQKAGIDLAWLDEQLKIWNIKSVKEVLFASLDSNKVLTVYKKEG
HHHHCCEEEEECCCCEEECHHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]