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The map label for this gene is SpmB [H]

Identifier: 20806637

GI number: 20806637

Start: 109248

End: 109778

Strand: Direct

Name: SpmB [H]

Synonym: TTE0108

Alternate gene names: 20806637

Gene position: 109248-109778 (Clockwise)

Preceding gene: 20806636

Following gene: 20806638

Centisome position: 4.06

GC content: 39.55

Gene sequence:

>531_bases
GTGATGTGTGTGGTAGAAATTTTTTCTGAATGGCTTGTCCCTGTTCTTCTTATAATTATACCTTTTTACGGTCTTGTAAA
AAAGGCTAAAGTTTATGAGATTTTTATAGAGGGCGCAAAAGAGGGACTAGATGTGGTTGTGAGGATTTTTCCTTCTCTTT
TAGCTATGCTGGTGGCTATAGGAGTTTTGAGGGCTTCTGGGGCTTTGAATTTGCTTGCCCAGATTTTGATGCCTTTCACT
CAAAAGATAGGTATGCCTGAAGAGCTTGTTCCCCTTGCTTTGATAAGGCCTCTTTCAGGGAGCGGAGCTTTAGGGATTGC
CACAGAACTTATGAAAACTTATGGTGCTGATTCTTTCATTGGCAAGATGGCTTCTGCTATGTACGGTTCTACAGAGACTA
CTTTTTATGTGCTTGCAGTTTACTTTGGAGCCGTAGGAATAAAGAATATAAGGCATTCAATCGTTTCTGGAATTTTTGCT
GATATAGTGGCTATTATCTCTTGCGTTTTTTACAGCCGCATATTTTTTTAG

Upstream 100 bases:

>100_bases
CGGCGGATTTTGTAATTGTGAGCATTTTTTCTACAGCTACAGCTCTTACGGCAGGGTTAATTTTCAACAACTTTATTGAA
AAAATGTCAATATTTAGGGA

Downstream 100 bases:

>100_bases
GCCTTGTATACTTTTTCCCTTTTGTTATACTTATTATTGGTAGGCAATTTACCTTTTTGAAAGGAAGGATCTTCGTGGCT
ACAATACCCAGGCTCATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MMCVVEIFSEWLVPVLLIIIPFYGLVKKAKVYEIFIEGAKEGLDVVVRIFPSLLAMLVAIGVLRASGALNLLAQILMPFT
QKIGMPEELVPLALIRPLSGSGALGIATELMKTYGADSFIGKMASAMYGSTETTFYVLAVYFGAVGIKNIRHSIVSGIFA
DIVAIISCVFYSRIFF

Sequences:

>Translated_176_residues
MMCVVEIFSEWLVPVLLIIIPFYGLVKKAKVYEIFIEGAKEGLDVVVRIFPSLLAMLVAIGVLRASGALNLLAQILMPFT
QKIGMPEELVPLALIRPLSGSGALGIATELMKTYGADSFIGKMASAMYGSTETTFYVLAVYFGAVGIKNIRHSIVSGIFA
DIVAIISCVFYSRIFF
>Mature_176_residues
MMCVVEIFSEWLVPVLLIIIPFYGLVKKAKVYEIFIEGAKEGLDVVVRIFPSLLAMLVAIGVLRASGALNLLAQILMPFT
QKIGMPEELVPLALIRPLSGSGALGIATELMKTYGADSFIGKMASAMYGSTETTFYVLAVYFGAVGIKNIRHSIVSGIFA
DIVAIISCVFYSRIFF

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 19123; Mature: 19123

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCVVEIFSEWLVPVLLIIIPFYGLVKKAKVYEIFIEGAKEGLDVVVRIFPSLLAMLVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLRASGALNLLAQILMPFTQKIGMPEELVPLALIRPLSGSGALGIATELMKTYGADSFI
HHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHH
GKMASAMYGSTETTFYVLAVYFGAVGIKNIRHSIVSGIFADIVAIISCVFYSRIFF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMCVVEIFSEWLVPVLLIIIPFYGLVKKAKVYEIFIEGAKEGLDVVVRIFPSLLAMLVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLRASGALNLLAQILMPFTQKIGMPEELVPLALIRPLSGSGALGIATELMKTYGADSFI
HHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHH
GKMASAMYGSTETTFYVLAVYFGAVGIKNIRHSIVSGIFADIVAIISCVFYSRIFF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]