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The map label for this gene is 20806621

Identifier: 20806621

GI number: 20806621

Start: 95720

End: 95944

Strand: Direct

Name: 20806621

Synonym: TTE0092

Alternate gene names: NA

Gene position: 95720-95944 (Clockwise)

Preceding gene: 20806620

Following gene: 20806622

Centisome position: 3.56

GC content: 36.0

Gene sequence:

>225_bases
GTGGTGTGCCAGATGGAGGATGTCACGATAAAAAGAAAATGTTTTATATGCGATAAAGAGGTACAAGATGGCATAGATGT
ATTAGGAAAATTTATATGCGAAGAGTGTCAGAAGAGATTGATAAATTTGTCTCCCTTCGATAAGAACTATGACTTCTACA
GGCAAAAGATGATTGATATATGGGAGGATTATATGAAAGATGTCGGGTATGAAAACTGGGTGTAA

Upstream 100 bases:

>100_bases
TTAATGACCATCTGGTTAGCTGTTTTAGATATAAAGAATTATCATAAAGTAGAATATTTTTCAAGAAATAGGGAATAATT
CTATTAGGATAATATTGAAA

Downstream 100 bases:

>100_bases
ATCCAGTTTTCTTTTTTTGTGGTATAATGAAAATGAAAAATGTTTTGTGGAGGTATTTTATGTCAACTCCTTTGTACGAT
GCTCTCATGGAATACGTGAA

Product: sigma-F transcribed protein csfB

Products: NA

Alternate protein names: Sigma-F Transcribed Protein CsfB

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MVCQMEDVTIKRKCFICDKEVQDGIDVLGKFICEECQKRLINLSPFDKNYDFYRQKMIDIWEDYMKDVGYENWV

Sequences:

>Translated_74_residues
MVCQMEDVTIKRKCFICDKEVQDGIDVLGKFICEECQKRLINLSPFDKNYDFYRQKMIDIWEDYMKDVGYENWV
>Mature_74_residues
MVCQMEDVTIKRKCFICDKEVQDGIDVLGKFICEECQKRLINLSPFDKNYDFYRQKMIDIWEDYMKDVGYENWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9015; Mature: 9015

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCQMEDVTIKRKCFICDKEVQDGIDVLGKFICEECQKRLINLSPFDKNYDFYRQKMIDI
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
WEDYMKDVGYENWV
HHHHHHHCCCCCCC
>Mature Secondary Structure
MVCQMEDVTIKRKCFICDKEVQDGIDVLGKFICEECQKRLINLSPFDKNYDFYRQKMIDI
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
WEDYMKDVGYENWV
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA