| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is 20806594
Identifier: 20806594
GI number: 20806594
Start: 69569
End: 70477
Strand: Direct
Name: 20806594
Synonym: TTE0062
Alternate gene names: NA
Gene position: 69569-70477 (Clockwise)
Preceding gene: 20806593
Following gene: 20806595
Centisome position: 2.59
GC content: 42.02
Gene sequence:
>909_bases ATGTTCAGATTGGAAAGATTAAGGGATAAGCCTATCCTCTCTCCAATAGAAGAACACGAATGGGAAAGGGCTGCGGTTTT TAATGCTGCTGCTATATACGAAGATGGGAAAGTGCACCTTTTTTACAGAGCCTCTAACAATAAATTTGTGTTAAATATCG AAAAACCGCAGGAAGAAAATAAATTCGTGTCCTCTATTGGATATGCTGTAAGTGAAGATGGCATTAATTTTCAGAGATTT GACAAGCCTATCCTTGTGGGGGAAACTCCTCAGGAGGCTTGGGGTGTAGAAGACCCCCGAATCACAAAGCTAGAAGGAAA ATACTATATGCTCTATACTGGATTTGGAGGTAGGGACTGGTTAGATTTTAGAATCTGCATGGTATGGTCAGAGGACCTAA AAAGCTGGGAAGGACATAGAATAGTATTAGATGAACCTAATAAAGATGCAGCACTTTTGTCCGAAAAAATAAATGGCAAG TATGTACTTTTTCACAGGCGAATGCCTGACATCTGGATTGCTTATTCAGAAGATTTGGTTAACTGGCATGACCATAAAAT TATAATGTCTCCTAGGAAGGGATGGTGGGACTCTAAGAAAATAGGCATAGCGGGACCCCCACTCAAGATGGAAGATGGCT GGCTTTTAATCTACCACGGAGTCGATGAAAACAACGTGTACAGGCTGGGAGCAGCGCTTTTGGACTTGAAGGACCCGTCA AAGGTTATAGCAAGGCAAGAAGAACCTATTTTAGAGCCGGAGTTACCTTGGGAAAAAGAAGGATTAGTGCCAAACGTGGT ATTTAGCTGCGGCGCTGTGGAGATAGATGGAGTATTCTACGTCTACTACGGTGCAGCTGATACGTGCATAGGCGTTGCAG CTGTGGAAAAACAAAAAGTAAAATTTTAA
Upstream 100 bases:
>100_bases AATTGAAGATTTAGTGAATAAAAGAGAGATTAACCCTGAAAACTTCGCTATAGCACCCAATGGAGTAGTTGCATTTTGGC TTAAAAAGGGGGTATAAATA
Downstream 100 bases:
>100_bases AAAGGAGTGTAAAAAGTGATAAAGTTAAGGAGATTATCGGATAAGCCTGTTCTTGTGCCAAAACCAGAGAACGAGTGGGA AAGAGCTGCAGTTTTTAACA
Product: glycosylase
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MFRLERLRDKPILSPIEEHEWERAAVFNAAAIYEDGKVHLFYRASNNKFVLNIEKPQEENKFVSSIGYAVSEDGINFQRF DKPILVGETPQEAWGVEDPRITKLEGKYYMLYTGFGGRDWLDFRICMVWSEDLKSWEGHRIVLDEPNKDAALLSEKINGK YVLFHRRMPDIWIAYSEDLVNWHDHKIIMSPRKGWWDSKKIGIAGPPLKMEDGWLLIYHGVDENNVYRLGAALLDLKDPS KVIARQEEPILEPELPWEKEGLVPNVVFSCGAVEIDGVFYVYYGAADTCIGVAAVEKQKVKF
Sequences:
>Translated_302_residues MFRLERLRDKPILSPIEEHEWERAAVFNAAAIYEDGKVHLFYRASNNKFVLNIEKPQEENKFVSSIGYAVSEDGINFQRF DKPILVGETPQEAWGVEDPRITKLEGKYYMLYTGFGGRDWLDFRICMVWSEDLKSWEGHRIVLDEPNKDAALLSEKINGK YVLFHRRMPDIWIAYSEDLVNWHDHKIIMSPRKGWWDSKKIGIAGPPLKMEDGWLLIYHGVDENNVYRLGAALLDLKDPS KVIARQEEPILEPELPWEKEGLVPNVVFSCGAVEIDGVFYVYYGAADTCIGVAAVEKQKVKF >Mature_302_residues MFRLERLRDKPILSPIEEHEWERAAVFNAAAIYEDGKVHLFYRASNNKFVLNIEKPQEENKFVSSIGYAVSEDGINFQRF DKPILVGETPQEAWGVEDPRITKLEGKYYMLYTGFGGRDWLDFRICMVWSEDLKSWEGHRIVLDEPNKDAALLSEKINGK YVLFHRRMPDIWIAYSEDLVNWHDHKIIMSPRKGWWDSKKIGIAGPPLKMEDGWLLIYHGVDENNVYRLGAALLDLKDPS KVIARQEEPILEPELPWEKEGLVPNVVFSCGAVEIDGVFYVYYGAADTCIGVAAVEKQKVKF
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34870; Mature: 34870
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLERLRDKPILSPIEEHEWERAAVFNAAAIYEDGKVHLFYRASNNKFVLNIEKPQEEN CCCHHHHCCCCCCCCHHHCCCHHHHHEEEEEEEECCEEEEEEEECCCEEEEEECCCCCHH KFVSSIGYAVSEDGINFQRFDKPILVGETPQEAWGVEDPRITKLEGKYYMLYTGFGGRDW HHHHHHCCEEECCCCCHHHCCCCEEEECCCHHHCCCCCCEEEEECCCEEEEEECCCCCCE LDFRICMVWSEDLKSWEGHRIVLDEPNKDAALLSEKINGKYVLFHRRMPDIWIAYSEDLV EEEEEEEEEEHHHCCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCC NWHDHKIIMSPRKGWWDSKKIGIAGPPLKMEDGWLLIYHGVDENNVYRLGAALLDLKDPS CCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEEEEEEECCCCH KVIARQEEPILEPELPWEKEGLVPNVVFSCGAVEIDGVFYVYYGAADTCIGVAAVEKQKV HHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCEEECCEEEEEECCCCHHEEEEECCHHHC KF CC >Mature Secondary Structure MFRLERLRDKPILSPIEEHEWERAAVFNAAAIYEDGKVHLFYRASNNKFVLNIEKPQEEN CCCHHHHCCCCCCCCHHHCCCHHHHHEEEEEEEECCEEEEEEEECCCEEEEEECCCCCHH KFVSSIGYAVSEDGINFQRFDKPILVGETPQEAWGVEDPRITKLEGKYYMLYTGFGGRDW HHHHHHCCEEECCCCCHHHCCCCEEEECCCHHHCCCCCCEEEEECCCEEEEEECCCCCCE LDFRICMVWSEDLKSWEGHRIVLDEPNKDAALLSEKINGKYVLFHRRMPDIWIAYSEDLV EEEEEEEEEEHHHCCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCC NWHDHKIIMSPRKGWWDSKKIGIAGPPLKMEDGWLLIYHGVDENNVYRLGAALLDLKDPS CCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEEEEEEECCCCH KVIARQEEPILEPELPWEKEGLVPNVVFSCGAVEIDGVFYVYYGAADTCIGVAAVEKQKV HHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCEEECCEEEEEECCCCHHEEEEECCHHHC KF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA