| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is OppF [H]
Identifier: 20806591
GI number: 20806591
Start: 66472
End: 67452
Strand: Direct
Name: OppF [H]
Synonym: TTE0058
Alternate gene names: 20806591
Gene position: 66472-67452 (Clockwise)
Preceding gene: 20806590
Following gene: 20806592
Centisome position: 2.47
GC content: 38.53
Gene sequence:
>981_bases ATGAGCAAGATAATTGAAATTAAAGATGTAAGCAAAGTATTTTCCAGAGGCTTTTTTAAAAAGAAACACAGAGTGGTTTT AGAAGACATAAATTTAGAGATCTCAAAGGGAGATAGGCTTGTCATAGTAGGAGAAAGCGGAATGGGGAAAACAACTCTTG CGCGTATAATGGCAGATTTAGAAAAACCTTCTTCTGGGGAAGTTTTGTGGTTTGGGGAGGACATACACAAAATAGACAAA AGAAGAAGAAAGGAATTGAGAGGAAAAGTTCAATACGTTCACCAAGACCCTTATGCTTCTTTGCATCCAGCGAAAACTAT ATACAAGGTAATTGCAGACCCTTTGGCGAATGCCCAGAGAGTAAATGGGAAAACTCTTTATCAAAGGACAAAAGATTTAC TGGAAAAGATAGGCCTTGTGCCAGCAGAATACTTTTTTAACAAATATCCTCACCATTTATCAGGTGGAGGCAGACAGAGA TTGGCTATTGCTAGAGCTTTAACTACGGACCCAGAGGTTATAATTGCCGATGAACCTATAAGCATGATTGATATGTCATT AAGGGCAGCTATAATAAAACTTTTTAAAGATTTAAATGACCTTTACGGAATAGCAGTTGTGTTAGTTCTTCACGATATAG GAGCTGCAAAGTACTTTACTTTTGAAAAAGGAGAAATTGTTGTACTCTACGGCGGGAAGATAGTGGAAAAAGGAAGAGGA ATCAGGATATTGGAAAATCCAGCTCATCCTTATACAAGAGTTTTGATAAACTCCAGTCCTATTGCAGACCCTGAGCTTGC TAGGAATAGAGTATTAGAGCAGTTGAGGTCTTATGATGTGCCTATAAGAACTAAAGAGAGCAAAGGGTGTCCTTTTGCTC ACGCCTGCAACTATTACACTGAGAAGTGCAAAGAAGAAGTTCCGCCTTTGGTTACTATAGAAGAGGGACATCAAGTAGCC TGTCATGTCTTTGGAAAGTAA
Upstream 100 bases:
>100_bases ATGCTATGGAAATATGCAAAAAAGAAAAACCCAAATGGATAAGGTTAGATGGAGAAGCGCACGTGGCATGTCATTTGTAT GAAGAAGGGAGACCATTAAA
Downstream 100 bases:
>100_bases AGGTGAGAAAGTGTGAATGAAAAGTTGGCTTTTTCTATTTCTATATTAGTAGTTTTCTTATCTGTACTTTGGATGGTTGC TTTTAGAAAAAGCGGCGGAG
Product: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSKIIEIKDVSKVFSRGFFKKKHRVVLEDINLEISKGDRLVIVGESGMGKTTLARIMADLEKPSSGEVLWFGEDIHKIDK RRRKELRGKVQYVHQDPYASLHPAKTIYKVIADPLANAQRVNGKTLYQRTKDLLEKIGLVPAEYFFNKYPHHLSGGGRQR LAIARALTTDPEVIIADEPISMIDMSLRAAIIKLFKDLNDLYGIAVVLVLHDIGAAKYFTFEKGEIVVLYGGKIVEKGRG IRILENPAHPYTRVLINSSPIADPELARNRVLEQLRSYDVPIRTKESKGCPFAHACNYYTEKCKEEVPPLVTIEEGHQVA CHVFGK
Sequences:
>Translated_326_residues MSKIIEIKDVSKVFSRGFFKKKHRVVLEDINLEISKGDRLVIVGESGMGKTTLARIMADLEKPSSGEVLWFGEDIHKIDK RRRKELRGKVQYVHQDPYASLHPAKTIYKVIADPLANAQRVNGKTLYQRTKDLLEKIGLVPAEYFFNKYPHHLSGGGRQR LAIARALTTDPEVIIADEPISMIDMSLRAAIIKLFKDLNDLYGIAVVLVLHDIGAAKYFTFEKGEIVVLYGGKIVEKGRG IRILENPAHPYTRVLINSSPIADPELARNRVLEQLRSYDVPIRTKESKGCPFAHACNYYTEKCKEEVPPLVTIEEGHQVA CHVFGK >Mature_325_residues SKIIEIKDVSKVFSRGFFKKKHRVVLEDINLEISKGDRLVIVGESGMGKTTLARIMADLEKPSSGEVLWFGEDIHKIDKR RRKELRGKVQYVHQDPYASLHPAKTIYKVIADPLANAQRVNGKTLYQRTKDLLEKIGLVPAEYFFNKYPHHLSGGGRQRL AIARALTTDPEVIIADEPISMIDMSLRAAIIKLFKDLNDLYGIAVVLVLHDIGAAKYFTFEKGEIVVLYGGKIVEKGRGI RILENPAHPYTRVLINSSPIADPELARNRVLEQLRSYDVPIRTKESKGCPFAHACNYYTEKCKEEVPPLVTIEEGHQVAC HVFGK
Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG4608
COG function: function code E; ABC-type oligopeptide transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=285, Percent_Identity=28.7719298245614, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI171184400, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI42741659, Length=183, Percent_Identity=31.1475409836066, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI42490749, Length=233, Percent_Identity=29.1845493562232, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI148612844, Length=232, Percent_Identity=29.3103448275862, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI255708477, Length=232, Percent_Identity=29.3103448275862, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9665248, Length=267, Percent_Identity=23.9700374531835, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI9961252, Length=171, Percent_Identity=28.6549707602339, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4505771, Length=171, Percent_Identity=28.6549707602339, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI21729873, Length=249, Percent_Identity=26.9076305220884, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI15149474, Length=249, Percent_Identity=26.9076305220884, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789962, Length=307, Percent_Identity=35.5048859934853, Blast_Score=204, Evalue=9e-54, Organism=Escherichia coli, GI1787500, Length=320, Percent_Identity=34.6875, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI145693107, Length=267, Percent_Identity=39.3258426966292, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI1787758, Length=322, Percent_Identity=33.5403726708075, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI1789963, Length=303, Percent_Identity=34.6534653465347, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1789891, Length=262, Percent_Identity=31.2977099236641, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1787547, Length=259, Percent_Identity=33.5907335907336, Blast_Score=148, Evalue=4e-37, Organism=Escherichia coli, GI1788506, Length=258, Percent_Identity=32.5581395348837, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1787759, Length=325, Percent_Identity=29.2307692307692, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI48994883, Length=322, Percent_Identity=27.3291925465839, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1786398, Length=287, Percent_Identity=27.5261324041812, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=32.4324324324324, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI48994997, Length=233, Percent_Identity=32.1888412017167, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=33.739837398374, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI87081791, Length=266, Percent_Identity=31.5789473684211, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1788761, Length=247, Percent_Identity=31.9838056680162, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788450, Length=259, Percent_Identity=30.1158301158301, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1789873, Length=210, Percent_Identity=32.3809523809524, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1787548, Length=330, Percent_Identity=25.1515151515152, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789032, Length=237, Percent_Identity=32.0675105485232, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787370, Length=251, Percent_Identity=31.4741035856574, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788225, Length=253, Percent_Identity=32.8063241106719, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787089, Length=223, Percent_Identity=32.2869955156951, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1786703, Length=218, Percent_Identity=33.4862385321101, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787712, Length=267, Percent_Identity=29.9625468164794, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI87081709, Length=251, Percent_Identity=29.8804780876494, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788644, Length=244, Percent_Identity=30.7377049180328, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1790467, Length=256, Percent_Identity=32.03125, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=31.7596566523605, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789586, Length=213, Percent_Identity=30.5164319248826, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789890, Length=249, Percent_Identity=28.1124497991968, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786563, Length=266, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789672, Length=257, Percent_Identity=26.8482490272374, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786319, Length=238, Percent_Identity=28.9915966386555, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082267, Length=236, Percent_Identity=28.3898305084746, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=28.2051282051282, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787164, Length=207, Percent_Identity=30.4347826086957, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786872, Length=244, Percent_Identity=29.9180327868852, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790162, Length=241, Percent_Identity=29.4605809128631, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=27.2, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1786698, Length=187, Percent_Identity=30.4812834224599, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=27.6995305164319, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786803, Length=222, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787143, Length=236, Percent_Identity=30.9322033898305, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1788053, Length=194, Percent_Identity=32.4742268041237, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787112, Length=236, Percent_Identity=25, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788897, Length=260, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786253, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790534, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI48994943, Length=243, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081782, Length=238, Percent_Identity=25.2100840336134, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786654, Length=245, Percent_Identity=25.3061224489796, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193209708, Length=235, Percent_Identity=31.063829787234, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17567265, Length=227, Percent_Identity=27.7533039647577, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193208177, Length=222, Percent_Identity=29.2792792792793, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=27.2321428571429, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71984940, Length=188, Percent_Identity=30.3191489361702, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71996550, Length=226, Percent_Identity=31.4159292035398, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=258, Percent_Identity=29.0697674418605, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6319856, Length=231, Percent_Identity=28.1385281385281, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323217, Length=231, Percent_Identity=27.7056277056277, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI85726357, Length=233, Percent_Identity=27.4678111587983, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24659289, Length=232, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24666836, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574744, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI19920532, Length=241, Percent_Identity=27.8008298755187, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580930, Length=241, Percent_Identity=27.8008298755187, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI161076682, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI161076684, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581617, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581615, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357907, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574533, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI17136592, Length=239, Percent_Identity=26.3598326359833, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 36787; Mature: 36656
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIEIKDVSKVFSRGFFKKKHRVVLEDINLEISKGDRLVIVGESGMGKTTLARIMADL CCCEEEHHHHHHHHHHHHHHHHCEEEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHHH EKPSSGEVLWFGEDIHKIDKRRRKELRGKVQYVHQDPYASLHPAKTIYKVIADPLANAQR CCCCCCCEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCHHH VNGKTLYQRTKDLLEKIGLVPAEYFFNKYPHHLSGGGRQRLAIARALTTDPEVIIADEPI CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCH SMIDMSLRAAIIKLFKDLNDLYGIAVVLVLHDIGAAKYFTFEKGEIVVLYGGKIVEKGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCEEEECCCC IRILENPAHPYTRVLINSSPIADPELARNRVLEQLRSYDVPIRTKESKGCPFAHACNYYT EEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH EKCKEEVPPLVTIEEGHQVACHVFGK HHHHHHCCCEEEECCCCEEEEEECCC >Mature Secondary Structure SKIIEIKDVSKVFSRGFFKKKHRVVLEDINLEISKGDRLVIVGESGMGKTTLARIMADL CCEEEHHHHHHHHHHHHHHHHCEEEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHHH EKPSSGEVLWFGEDIHKIDKRRRKELRGKVQYVHQDPYASLHPAKTIYKVIADPLANAQR CCCCCCCEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCHHH VNGKTLYQRTKDLLEKIGLVPAEYFFNKYPHHLSGGGRQRLAIARALTTDPEVIIADEPI CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCH SMIDMSLRAAIIKLFKDLNDLYGIAVVLVLHDIGAAKYFTFEKGEIVVLYGGKIVEKGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCEEEECCCC IRILENPAHPYTRVLINSSPIADPELARNRVLEQLRSYDVPIRTKESKGCPFAHACNYYT EEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH EKCKEEVPPLVTIEEGHQVACHVFGK HHHHHHCCCEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 8550458 [H]