Click here to switch to the map view.

The map label for this gene is yncD

Identifier: 207856918

GI number:

Start: 1557783

End: 1559888

Strand: Reverse

Name: yncD

Synonym: SEN1468

Alternate gene names: NA

Gene position: NA

Preceding gene: 207856921

Following gene: 207856915

Centisome position: NA

GC content: NA

Gene sequence:

>2106_bases
ATGAAAATTATTTCCGTTAGACAGCGACTTTATCCCGCCCTCTTATTGCCTCTGACCTTCTCCCCGGTCCTTCAGGCCGC
CAGCGCGTCCAATGAACAAACCATGATAGTCACCGCAACGCCGCAAACCGTATCCGAACTGGATACACCTGCCGCCGTTA
GCGTCATTGAGGGAGAAGACATGCGTCTGGCGACGCCGCGCGTTAATTTATCTGAGACTTTAACCAGCGTCCCGGGATTG
CAGGTGCAGAACCGGCAGAACTACGCGCAGGATCTGCAAATCTCTATCCGTGGATTTGGCTCGCGTTCCGCCTTTGGCGT
GCGCGGCATTCGTCTGTATGTTGATGGCATTCCCGCCACCATGCCGGATGGACAAGGCCAGATTTCGAATATTGATATTA
ACAGCATACAAGACGTTGAAGTGTTACGCGGCCCCTTCTCAGCGCTATACGGCAATGCTTCCGGCGGCGTAATAAATGTC
ACCACCGAAACCGGGATTGAGGCCAGCAGCTACTACGGCAGTTATGGAAGCTGGCGCTATGGGCTAAAAGCCACGGGCGC
GATGGGTGACGGCACACAGCCTGGCGACGTGGATTACACGGTATCAACTACCCGTTTCACCACCCACGGCTACCGCGATC
ACAGCGGCGCGCGAAAAAATCTGGCTAATGCCAAACTGGGCGTGCGCCTTGACGATGTCAGTAAACTTTCGCTGATTTTT
AATAGTGTGGACATTAAGGCGGACGATCCCGGCGGACTTACCGAATCTGAATGGAAAGCCGATCCGCAACAGGCGCCGCG
CGCTGAACAGTACAATACGCGTAAAACCATCAAACAAACTCAGGCAGGATTGCGTTATGAACGTCAGCTCAGCGCGCAGG
ATGATATCAGCGTGATGGCCTACGCCGGAGAGCGGGAAACCACGCAATACCAGTCTATTCCCCTGGTGGCACAGCTAAAA
CCAGCCCAGGCTGGCGGCGTAATTACACTGCAACGCCACTATCAGGGAATTGATTCCCGCTGGACTCACCGGGGAGAATT
AGGTGTGCCGGTCACCTTCACTGGCGGGTTAAACTATGAAAACATGAGCGAAAACCGCAAGGGTTACAATAACTTCCGTC
TCAACAACGGCCCCCCTGAGTTCGGGCATAAAGGCGATTTACGGCGGGATGAGCGTAACCTGATGTGGAATGTCGATCCT
TATCTGCAAACCCAGTGGCAGCTTACGCAAAAACTCTCGCTGGATGCTGGCGTGCGCTACAGTTCCGTGTGGTTCGATTC
TAACGATCACTATATCGCGCCCGGCAATGGCGATGACAGCGGCGACGCCAGCTATCACCACTGGCTACCCGCCGGATCGC
TAAAATATGCGTTAACTGACGCCTGGAATCTCTATCTTGCTGCCGGTCGCGGATTTGAAACTCCCACTATCAATGAACTT
TCTTATCGCGCTGACGGCCAAAGCGGGTTCAACTTTGACCTCAAACCGTCGACCAATGATACGGTGGAAGTCGGCAGTAA
AACGCGGATTGGCAATGGCTTGTTGACCGCCGCGTTATTTCAAACCGATACCGATGATGAAATTGTCGTCGCCAGTAGTA
TGGGAGGACGCACTACCTACAAAAACGCGGGCAAAACGCGCCGCCAGGGCGCAGAGCTCGCGTTGGACCAGCGCTTCGCC
GGCGACTGGCGGGTGAAAGCATCATGGACCTGGCTGGATGCGACCTATCGCAGTAACGTTTGTCAGGGGCAAAACTGTGA
TGGAAACCGGATGCCCGGCATCGCCCGTAATATGGGATTCGCCTCATTAGGTTTTATCCCGGATGAGGGGTGGTACGCCG
GAACAGACGTTCGGTATATGGGCGATATCATGGCCAATGATGAAAATACCGCCAAAGCGCCTTCGTATACCGTTGTTGGA
CTAAATACAGGGTATAAATTTAATTACAGTCAGCTTACCGTCGATATTTTTGGGCGGGTAGATAATCTATTTGATAAAGA
ATATATCGGTTCGGTGATCGTTAATGAATCTAATGGCCGATATTATGAGCCAGCGCCAGGGCGTAACTATGGCGTGGGGA
TTAATCTGGCATGGCAATTTGAATAA

Upstream 100 bases:

>100_bases
TTCTTAACTTAATGTGCGATTAAAATTTCAAAACTTTACATATTGACTACCCTTAATGTCACGTTTTCCGTTGATACGCT
TACATTTATCCGGCATTTTC

Downstream 100 bases:

>100_bases
ATATCCGGCAATAGCGGGGCATCCCCGCTATTGATTAGTCATAGTTTCATGAAAGTTACATGAAGTACTGATTTTTAATC
GTCGCTACGTTTTGTTGCAA

Product: TonB-dependent receptor YncD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>701_residues
MKIISVRQRLYPALLLPLTFSPVLQAASASNEQTMIVTATPQTVSELDTPAAVSVIEGEDMRLATPRVNLSETLTSVPGL
QVQNRQNYAQDLQISIRGFGSRSAFGVRGIRLYVDGIPATMPDGQGQISNIDINSIQDVEVLRGPFSALYGNASGGVINV
TTETGIEASSYYGSYGSWRYGLKATGAMGDGTQPGDVDYTVSTTRFTTHGYRDHSGARKNLANAKLGVRLDDVSKLSLIF
NSVDIKADDPGGLTESEWKADPQQAPRAEQYNTRKTIKQTQAGLRYERQLSAQDDISVMAYAGERETTQYQSIPLVAQLK
PAQAGGVITLQRHYQGIDSRWTHRGELGVPVTFTGGLNYENMSENRKGYNNFRLNNGPPEFGHKGDLRRDERNLMWNVDP
YLQTQWQLTQKLSLDAGVRYSSVWFDSNDHYIAPGNGDDSGDASYHHWLPAGSLKYALTDAWNLYLAAGRGFETPTINEL
SYRADGQSGFNFDLKPSTNDTVEVGSKTRIGNGLLTAALFQTDTDDEIVVASSMGGRTTYKNAGKTRRQGAELALDQRFA
GDWRVKASWTWLDATYRSNVCQGQNCDGNRMPGIARNMGFASLGFIPDEGWYAGTDVRYMGDIMANDENTAKAPSYTVVG
LNTGYKFNYSQLTVDIFGRVDNLFDKEYIGSVIVNESNGRYYEPAPGRNYGVGINLAWQFE

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA