Click here to switch to the map view.

The map label for this gene is hrpA

Identifier: 207856862

GI number:

Start: 1493849

End: 1497751

Strand: Direct

Name: hrpA

Synonym: SEN1411

Alternate gene names: NA

Gene position: NA

Preceding gene: 207856860

Following gene: 207856863

Centisome position: NA

GC content: NA

Gene sequence:

>3903_bases
ATGACTGAACAATCTACGTTGACGCTTCAGGTGTTACAGCAGCGGCTGGATGCACTGATGCTGCGCGACAAACAGCGCTT
TGCGCGCCGCCTGCATGGCGTAAAGAAAGTAAAAAATCCTGATGCGCAACAGGCCATTTTCCAGACGATGGCGAAAGAAA
TTGAACAGGCTGTGGCGCAAGTCGCCCTCCGTGAAGCGGCGCGCCCCTCAATCACTTATCCGCAAAATCTGCCTGTTAGC
CAGAAGAAACAGGACATTCTGGAAGCGGTCCGCGATCATCAGGTAGTGATCGTAGCAGGGGAAACCGGTTCCGGTAAAAC
CACCCAGTTGCCGAAAATTTGTATGGAACTGGGACGTGGAATTAAAGGACTTATTGGTCATACTCAGCCGCGTCGCCTGG
CGGCGCGCACCGTCGCTAACCGCATTGCCGAAGAGTTGCAAACGGAGCCAGGCGGCTGCATCGGCTATAAAGTTCGTTTC
AGCGATCATGTCAGTAGCAACACCATGGTCAAACTGATGACGGACGGTATCCTGCTGGCGGAAATCCAGCAGGACAGACT
ATTGATGCAGTATGACACCATCATTATTGATGAAGCGCATGAACGCAGCCTGAATATTGACTTCTTGCTCGGCTATCTGA
AAGAGCTTCTGCCGCGTCGCCCCGATCTGAAAGTGATTATTACCTCTGCGACCATCGACCCGGAACGCTTCTCGCGCCAC
TTTAATAACGCGCCGATTATCGAAGTCTCTGGCCGAACGTATCCCGTAGAAGTTCGTTATCGCCCCATCGTGGAAGAGGC
TGACGACACTGAACGCGATCAGCTACAGGCAATTTTCGACGCTGTTGATGAACTGGGGCGTGAAAGTCCCGGCGATATCC
TGATTTTTATGAGCGGAGAGCGGGAAATCCGCGATACCGCCGATGCCCTGAACAAGCTGAACTTACGGCATACCGAAGTG
TTGCCGCTGTATGCACGCTTGTCGAACAGCGAACAGAACCGCGTTTTCCAGTCGCACAGCGGACGCCGTATCGTGCTGGC
GACTAACGTGGCGGAAACCTCGCTGACGGTGCCGGGTATCAAGTATGTGATCGATCCTGGCACTGCGCGCATCAGCCGCT
ACAGCTACCGCACTAAAGTGCAGCGCCTGCCGATTGAACCGATCTCACAGGCTTCCGCCAATCAGCGTAAAGGGCGTTGC
GGACGCGTATCGGAAGGGATTTGCATTCGTCTGTATTCGGAAGATGACTTTTTGTCACGTCCGGAATTTACCGACCCGGA
AATTCTACGTACCAACCTGGCGTCGGTTATTTTGCAGATGACCGCACTGGGGCTGGGTGACATCGCCGCCTTCCCGTTTG
TTGAAGCGCCGGATAAGCGCAATATTCAGGATGGCGTGCGTTTGTTGGAAGAGCTGGGGGCGATTACCGCCGACGAACAG
CAAACGGCATATAAGCTGACGCCGCTGGGCCGACAATTATCCCAGTTGCCGGTCGACCCGCGCCTGGCGCGTATGGTTCT
GGAAGCGCAAAAGCATGGCTGTGTGCGCGAAGCGATGATCATTACTTCCGCACTCTCTATTCAGGATCCGCGCGAGCGCC
CAGTGGATAAGCAGCAGGCTTCCGATGAGAAACACCGGCGCTTTCATGATAAGGAATCCGATTTTCTGGCGTTTGTTAAC
CTGTGGAATTACCTCGGCGAGCAACAAAAGGCCCTGTCGTCGAATCAATTCCGCCGTCTGTGTCGCACCGACTATCTGAA
CTATTTACGCGTGCGTGAGTGGCAGGATATCTATACCCAACTGCGTCAGGTGGTAAAAGAGCTGGGGATTCCGGTAAACA
GCGAACCCGCAGAGTACCGGGAAATTCACGTTGCGTTGTTAACGGGGCTGTTGTCGCATATCGGGATGAAAGATGCCGAT
AAACAAGAGTACACCGGCGCGCGTAACGCCCGATTCTCTATTTTCCCCGGATCCGGTTTATTCAAAAAACCGCCGAAATG
GACAATGGTCGCAGAACTGGTGGAGACCAGCCGTTTGTGGGGGCGCATCGCTGCCCGCATTGAGCCAGAATGGGTGGAAC
CGGTAGCCCAGCACCTGATTAAACGTTCATATAGCGAACCGCACTGGGAGCGGGCGCAAGGCGCGGTGATGGCGACGGAA
AAGGTTACTGTCTACGGTCTGCCGATTGTCGCCGCGCGCAAGGTGAATTACAGCCAGATTGACCCGGCGTTGTGTCGTGA
GTTGTTTATCCGCCATGCGCTGGTGGAGGGGGACTGGCAAACCCGTCATGCCTTCTTCCGTGAGAATCTGAAATTGCGTG
CGGAAGTCGAGGAACTTGAGCACAAATCTCGCCGCCGCGATATCCTGGTGGATGACGATACCCTGTTTGAGTTTTATGAC
CAGCGTATTAGCCATGACGTTATTTCCGCCCGCCACTTTGATAGTTGGTGGAAAAAAATCAGCCGCGAGACGCCGGATCT
GCTCAACTTTGAAAAAAGTATGCTGATTAAAGAAGGCGCGGAAAAAATCAGCAAACTGGATTACCCGAATTTCTGGCACC
AGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAACCGGGCGCGGATGCTGACGGCGTGACCGTCCATATTCCGTTG
CCGCTACTTAACCAGGTTGACGAGAGCGGTTTTGAATGGCAGATCCCGGGGCTGCGCCGTGAATTAGTGATTGCGCTGAT
TAAATCGTTGCCAAAACCGGTACGTCGCAACTTTGTTCCGGCGCCAAACTATGCTGAAGCGTTTTTGGGTCGCGTAACGC
CGCTGGAGCTGCCGCTGCTGGACGCTCTGGAGCGTGAACTGCGCCGGATGACCGGCGTCACGGTCGACCGGGAAGACTGG
CATTGGGATCAGGTGCCCGGGCATCTGAAAATCACGTTTCGCGTGGTGAATGACAAAAACAAGAAACTGCAGGAAGGGCG
TTCGCTCGCCGAGCTTAAAAATGCGCTGAAAGGCAAAGTGCAGGAGACGCTCTCGGCGGTGGCGGATGACGGCATCGAGC
AGAGCGGGCTGCATATCTGGAGTTTCGGCGAGCTGCCGGAAAGCTACGAACAGAAACGCGGTAATTATAAAGTGAAGGCG
TGGCCAGCGTTAGTGGATGAGCGTGACAGCGTCGCTATCAAATTGTTTGATAATCCGCTGGAACAACAACAGGCGATGTG
GTGCGGTTTACGCCGTCTGCTGTTGCTCAATATTCCTTCACCGATTAAGTATCTGCATGAGAAATTGCCGAATAAAGCCA
AGCTGGGGCTGTACTTTAACCCGTACGGCAAAGTACTGGAGTTGATTGATGACTGTATCGCCTGCGGGGTAGATAAGCTG
ATAGATGCCAACGGCGGGCCGGTTTGGAGCGAAGCAGGTTTCACCGCGCTGCACGAAAAGGTTCGCGCCGAGCTGAATGA
TACTGTGGTGGATATCGCGAAGCAGGTTGAGCGGATCCTGACGACCGTATTCAATATCAATAAGCGTCTGAAAGGGCGGG
TGGATATGAGCATGGCGTTGGGGCTTTCCGATATCAAGGCGCAGATGAGCGGTCTGGTATACCGTGGTTTTGTGACTGGC
AACGGCTTTAAACGTCTCGGCGATACGCTGCGTTATCTGCAGGCAATTGAAAAGCGGCTGGAGAAACTGGCTGTCGATCC
GCACCGCGATCGGGCGCAAATGCTGAAAGTCGAAAGCGTCCAGCAGGCGTGGCAACAATGGATAAATAAATTGCCTCCAG
CGCGTCGCGAAGATGATGATGTTAAAGAGATCCGTTGGATGATTGAAGAACTGCGTGTCAGTTATTTCGCCCAACAGCTC
GGTACGCCTTATCCTATTTCCGATAAGCGTATTTTACAGGCCATGGATCAGATTACGGCCTAA

Upstream 100 bases:

>100_bases
GTTCGAAATTATTGAACAACACAAAAAAAGCCCCAATGTGGTACTCTATACCTATCATTTAAAACGATTTTAAACAGGCA
GAATGCTGCCCAAGAGCTTT

Downstream 100 bases:

>100_bases
AAAGCCAGGCGACGACGTCTTTCAAAGCGATCCGGTACAAGTTCGGAACAAAAAGGAGGAATTATGAATACAACGCCATT
TCCGGCGCTCTCTGCGGAAA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1300_residues
MTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAVAQVALREAARPSITYPQNLPVS
QKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRF
SDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEV
LPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC
GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQ
QTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVN
LWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDAD
KQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYD
QRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL
PLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDW
HWDQVPGHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVKA
WPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKL
IDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQL
GTPYPISDKRILQAMDQITA

Sequences:
NA

Specific function: NA

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA