Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203284646

Identifier: 203284646

GI number: 203284646

Start: 810240

End: 811742

Strand: Reverse

Name: 203284646

Synonym: BDU_756

Alternate gene names: NA

Gene position: 811742-810240 (Counterclockwise)

Preceding gene: 203284647

Following gene: 203284645

Centisome position: 87.13

GC content: 25.42

Gene sequence:

>1503_bases
ATGAAAAACAAACATCAAGAGATTCTAAATTTAACCTTAAACCTTATAATAATATTGCTAATCTTTTGTAATATATCTGT
TTTTACTTTCAAAATAGATCTTACTAAAAACAAAGCTTTTACGATTTCTCAAGTTACAAAAGATTTATTTTCAAATGCGA
ATGAAAAAATATATATTACTTATTATAATTCTGCAAGCCTTGGCAATTATTTTGCATTCCCGGAACAAATAAAAAATTTT
TTAACAAGTTTTTCTGACGCTTCAAGAGGAAAAGTGATTTATAAAGATATAGATGCTGATAAAATAGCAACTCCATTAGA
ACAAATTGGAATTCCATCACAACAAATAGATTTAAGAGAAATTAATCAGCTCTCAATACTAAAAATATATTCAGGAATTG
AAATCACATATGAAGGCAAACGTGAAGTACTTCCAATAGTAACAGAAATTAGCAATTTAGAATATGATCTTGCAAGCAGT
CTGGACAAATTAATAAATAATACACAAAAAATATTAGGACTCGTATTTGGAGATACAAATTTAAAAGCAACACATAAAAA
CTTTATAGAAATAATGCAAAAAGTTTTTAAAACAGAAGTTAAAGAAATAAATATAGAAAACGAACAATTACAAGACATCA
ATGGATTATTTATTATTGGCTCTAAAGACATAAATGAAAACACATTAAAAAAAATTGATGAGTTTATCGTCAATAATGGA
AGAATATTAATAACTACAAGTAAAATTGATTATAATCCTCAAAACCCATATACAACAACTTCTACTCAATCTCCAATATT
TAACCTAATTGAAAGTTATGGTATTAAATATAACGAAAATATTATACTTGACAAGAGATCACCAAGTCTTTTCTTAGGAG
GCAATTTCCAAACTTATTACCCATGGATCTTGATTAATAAAAATAATATCATAGATTCTAATAATCCTTTACTTAAAAAT
TTTTACGATGCTATCATTCCTTGGAGTAATTCACTAAATCTTATAGAAACAAAAGAAAATAATGATGACATAAAATATTC
ACCCTTATTTACAAGTTCTAAAGAATCTTGGCAAGTCAACAACGAAGAAGTTGCAAACATAGCCATGTATTCATTTAATA
TACCTAAAACATTTGATAAAGAAAATCAACAAATTCTTGGATATTCAGTTGAAGGAAAAATTAAAAGTCTATATAAAGAC
ATAAAATCTGCAAATTCAAAAATAGTGTTACTAGGTTCAAACATGATCTTTAGCGATTACATGTATAATGGTTCACCCTC
TAATTTTGAATTTGCTGGACGAATTTCAGACTATTTAATGCAAAAAGAAGCTTTTTTTAACATTAAATCAAGAGAAGTAC
GCTCAAAACTAAAATTTATAAATTCTTCAAAAGAAATGTTAAACGCAAAATTTTCATTAATAGTCATAAATTTGGTTATA
CTACCTATAGCAATAATAATATTTGGACTTATTAGATTTACAAAAAAACGAAAAATCAACTAA

Upstream 100 bases:

>100_bases
TTAAACTTATCAGATTTAATTTACTTCAGCACGTTTACAATTACATTTTTAATACTAAGCGCATATAGCATAAGATTAAA
AAAATGGAGATAGTTATTTT

Downstream 100 bases:

>100_bases
TGAAGGAGAACTTATGAATAATAAATACACATTGCTAGGAATTAAAGAGAACATAAAAATAGTAATAATCATAATATTAA
TATCCACATTTTTGTTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MKNKHQEILNLTLNLIIILLIFCNISVFTFKIDLTKNKAFTISQVTKDLFSNANEKIYITYYNSASLGNYFAFPEQIKNF
LTSFSDASRGKVIYKDIDADKIATPLEQIGIPSQQIDLREINQLSILKIYSGIEITYEGKREVLPIVTEISNLEYDLASS
LDKLINNTQKILGLVFGDTNLKATHKNFIEIMQKVFKTEVKEINIENEQLQDINGLFIIGSKDINENTLKKIDEFIVNNG
RILITTSKIDYNPQNPYTTTSTQSPIFNLIESYGIKYNENIILDKRSPSLFLGGNFQTYYPWILINKNNIIDSNNPLLKN
FYDAIIPWSNSLNLIETKENNDDIKYSPLFTSSKESWQVNNEEVANIAMYSFNIPKTFDKENQQILGYSVEGKIKSLYKD
IKSANSKIVLLGSNMIFSDYMYNGSPSNFEFAGRISDYLMQKEAFFNIKSREVRSKLKFINSSKEMLNAKFSLIVINLVI
LPIAIIIFGLIRFTKKRKIN

Sequences:

>Translated_500_residues
MKNKHQEILNLTLNLIIILLIFCNISVFTFKIDLTKNKAFTISQVTKDLFSNANEKIYITYYNSASLGNYFAFPEQIKNF
LTSFSDASRGKVIYKDIDADKIATPLEQIGIPSQQIDLREINQLSILKIYSGIEITYEGKREVLPIVTEISNLEYDLASS
LDKLINNTQKILGLVFGDTNLKATHKNFIEIMQKVFKTEVKEINIENEQLQDINGLFIIGSKDINENTLKKIDEFIVNNG
RILITTSKIDYNPQNPYTTTSTQSPIFNLIESYGIKYNENIILDKRSPSLFLGGNFQTYYPWILINKNNIIDSNNPLLKN
FYDAIIPWSNSLNLIETKENNDDIKYSPLFTSSKESWQVNNEEVANIAMYSFNIPKTFDKENQQILGYSVEGKIKSLYKD
IKSANSKIVLLGSNMIFSDYMYNGSPSNFEFAGRISDYLMQKEAFFNIKSREVRSKLKFINSSKEMLNAKFSLIVINLVI
LPIAIIIFGLIRFTKKRKIN
>Mature_500_residues
MKNKHQEILNLTLNLIIILLIFCNISVFTFKIDLTKNKAFTISQVTKDLFSNANEKIYITYYNSASLGNYFAFPEQIKNF
LTSFSDASRGKVIYKDIDADKIATPLEQIGIPSQQIDLREINQLSILKIYSGIEITYEGKREVLPIVTEISNLEYDLASS
LDKLINNTQKILGLVFGDTNLKATHKNFIEIMQKVFKTEVKEINIENEQLQDINGLFIIGSKDINENTLKKIDEFIVNNG
RILITTSKIDYNPQNPYTTTSTQSPIFNLIESYGIKYNENIILDKRSPSLFLGGNFQTYYPWILINKNNIIDSNNPLLKN
FYDAIIPWSNSLNLIETKENNDDIKYSPLFTSSKESWQVNNEEVANIAMYSFNIPKTFDKENQQILGYSVEGKIKSLYKD
IKSANSKIVLLGSNMIFSDYMYNGSPSNFEFAGRISDYLMQKEAFFNIKSREVRSKLKFINSSKEMLNAKFSLIVINLVI
LPIAIIIFGLIRFTKKRKIN

Specific function: Unknown

COG id: COG3225

COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019196 [H]

Pfam domain/function: PF09822 ABC_transp_aux [H]

EC number: NA

Molecular weight: Translated: 57400; Mature: 57400

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKHQEILNLTLNLIIILLIFCNISVFTFKIDLTKNKAFTISQVTKDLFSNANEKIYIT
CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEHHHHHHHHHCCCCCEEEEE
YYNSASLGNYFAFPEQIKNFLTSFSDASRGKVIYKDIDADKIATPLEQIGIPSQQIDLRE
EECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCCCCHHH
INQLSILKIYSGIEITYEGKREVLPIVTEISNLEYDLASSLDKLINNTQKILGLVFGDTN
CCCEEEEEEECCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHEEEEECCCC
LKATHKNFIEIMQKVFKTEVKEINIENEQLQDINGLFIIGSKDINENTLKKIDEFIVNNG
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
RILITTSKIDYNPQNPYTTTSTQSPIFNLIESYGIKYNENIILDKRSPSLFLGGNFQTYY
EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEECCEEEEECCCCCEEECCCCEEEE
PWILINKNNIIDSNNPLLKNFYDAIIPWSNSLNLIETKENNDDIKYSPLFTSSKESWQVN
CEEEEECCCEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCEECCCCCCCCCC
NEEVANIAMYSFNIPKTFDKENQQILGYSVEGKIKSLYKDIKSANSKIVLLGSNMIFSDY
CHHEEEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCEEEEEE
MYNGSPSNFEFAGRISDYLMQKEAFFNIKSREVRSKLKFINSSKEMLNAKFSLIVINLVI
EECCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LPIAIIIFGLIRFTKKRKIN
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNKHQEILNLTLNLIIILLIFCNISVFTFKIDLTKNKAFTISQVTKDLFSNANEKIYIT
CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEHHHHHHHHHCCCCCEEEEE
YYNSASLGNYFAFPEQIKNFLTSFSDASRGKVIYKDIDADKIATPLEQIGIPSQQIDLRE
EECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCCCCHHH
INQLSILKIYSGIEITYEGKREVLPIVTEISNLEYDLASSLDKLINNTQKILGLVFGDTN
CCCEEEEEEECCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHEEEEECCCC
LKATHKNFIEIMQKVFKTEVKEINIENEQLQDINGLFIIGSKDINENTLKKIDEFIVNNG
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
RILITTSKIDYNPQNPYTTTSTQSPIFNLIESYGIKYNENIILDKRSPSLFLGGNFQTYY
EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEECCEEEEECCCCCEEECCCCEEEE
PWILINKNNIIDSNNPLLKNFYDAIIPWSNSLNLIETKENNDDIKYSPLFTSSKESWQVN
CEEEEECCCEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCEECCCCCCCCCC
NEEVANIAMYSFNIPKTFDKENQQILGYSVEGKIKSLYKDIKSANSKIVLLGSNMIFSDY
CHHEEEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCEEEEEE
MYNGSPSNFEFAGRISDYLMQKEAFFNIKSREVRSKLKFINSSKEMLNAKFSLIVINLVI
EECCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LPIAIIIFGLIRFTKKRKIN
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]