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The map label for this gene is yoaA [C]

Identifier: 203284632

GI number: 203284632

Start: 790784

End: 792838

Strand: Reverse

Name: yoaA [C]

Synonym: BDU_740

Alternate gene names: 203284632

Gene position: 792838-790784 (Counterclockwise)

Preceding gene: 203284635

Following gene: 203284630

Centisome position: 85.1

GC content: 24.18

Gene sequence:

>2055_bases
ATGAACTTAAGTGAATATATCATTCAACAAGCAGAACTAAATATCAAAGGATTTGTAAGACGAGATACACAACTTAGGAT
GATAGACAAAATAAAACAAACCTTTAGGGATGAAAACTTTTTAGTCATTGAAGCACCAACAGGAACTGGAAAAAGTTTTG
CATATCTAATTGCTGCTATTGATTTCATTCACCAAACAAAAGAAAAAGTCATAATTTCAACATCATCAATTAATCTTCAA
GAACAATTAATAAAAAAAGATATTAAATCCTTAAAAAGGATTATTCCTTTTAAAATTAAGTTTGGCATAATTAAAGGAAT
GAAAAATTATATCTGCCTTAGAAGACTCGAAGAACTCAAAAAAAGCCTTCTAGCCCATACACTAAATAAAAAAAATTTAG
AAACATTAATCTACTGGGCACAAAACACAAAAACAGGAGATAAAGATGAACTTAATTTTATAGATGAACAAATTTGGGAA
GAAGTATCAGCAAATCCTGAAACATGCTCAGAAATTACCTGTCCTAATGAGAATAAATGTCTTTTTAAAAAAGCAAGAAA
TAAAATATTAAAATGCGATATCATTATAACCAATCACCATTTACTATTAAACGACCTTTATATAAGAAACGAAATACTAA
TGGAAAAAGAAAATCATGAAAATAATTTTGAAGAAGAAAACATAAATATCAATTTAATATTACCTAGTATAAAAAACATA
ATAGTTGATGAGGCTCACTATTTAGAAGAAGCTGCAAGAAGCTTATTTAATAAAAATTTTTCAAAAACTGGAATAAAACA
AATTTTTATAAAAATAGATAAAATAATTAAACGACAAAACATAAATAATATCTATAAGAAAGATTTTGAAATTTTCACAA
TACAAAACTTTGAAAACATAGAATATATAATAAACACACAAGAAAAATTACCATCAATCTACAGAATTACCAGTGATACA
CATAAAACAAACTTTTATATACGTATTAAAACATATCTACAAAATATCATTTATAATCTAGAAAATTATCAAATAACCAT
AAGATCAATAATACAAAATATAGAAAACAAAACGGCAAAAATAGAGCTAAATAGACTCATTAAAAATTTAGATCAAAAAA
AATTATTAATTCAAAATTTTATATCTGAAAATCAAGATGATAATCTTTGTTTTTGGATAGACAATAAAAAAAATATCCCT
TTATTTCAAACATCAGAAATTTATTTAGGTCCAGAACTAAATAAAATCATGTATCAACGAACAAAAAGAATAATTTTTAC
ATCGGCTACTATTATAATAAATCAATCATTTTCATACTTTTTAAATCAAACGGGACTAAATTTAAGTAATAAACACATCG
AAATGGAAAATTTACCATACTCATTTCCTTATCAAGAAAAATCAATACTCACAATTACATCAGATATTGAAAACCCTAAC
AACGAAGAAGAATTTTTAAATCAATCAACAAAATATATTAAAGAACTTGTGATATTAAACAAAGGAGGAACCCTAATTTT
ATTAACTTCGCTTAAAAGTTTAGAATACATAAGTAAAAATATCAAAGATTTTTTATTTGAAAATGACATAAACATTTTCA
TACAAGGACAATTACCAAAAAATGAACTTATAAATTCATTCAAAAAATCACCCAAAAAAAGCGTACTTATAGGAATAAAA
AATTTTTGGGAAGGAATTGACATTAAAGGAGATCAATTAACAATGATTATCATCCCCAAACTGCCATTTCAAACTCCTTC
AGATCCAATCTTAATAGCAAAAAATGAATTGGCTAAAAAAACAAATGAAAATTTTTTTATAAAAGAAACATTACCACAAG
CAATAATGAAATTTAAACAAGGATTTGGAAGACTAATTAGGGACTCTAAAGATTATGGAATCATAGTATGTTTTGATAAA
AGAATTTGCAACAAAACTTATGGCAAATCATTTTTAAAATCATTACCTAAAATCAAAACTTACTACTCAAACTTTACAAC
TATCAAACATACAATAAATACATTTTTTAAAATAGATCAAAATATTAATCCATAA

Upstream 100 bases:

>100_bases
GCAATATCATAATATAAAACATCAAAAAATTTAAAATATACAATAAAATTAATCACAGTACATAAAAAATTTGCAAAAAT
AATAAAAGGATGCTGCATAA

Downstream 100 bases:

>100_bases
GGATATTATTTCCCGGAATTTTAGTCTTTCTTACCAAAATGTCCTTATATCCTGTAGATTTAATGAGTTCAACATTCTTC
TGTACATCATCAGCATAAGT

Product: ATP-dependent helicase, DinG family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MNLSEYIIQQAELNIKGFVRRDTQLRMIDKIKQTFRDENFLVIEAPTGTGKSFAYLIAAIDFIHQTKEKVIISTSSINLQ
EQLIKKDIKSLKRIIPFKIKFGIIKGMKNYICLRRLEELKKSLLAHTLNKKNLETLIYWAQNTKTGDKDELNFIDEQIWE
EVSANPETCSEITCPNENKCLFKKARNKILKCDIIITNHHLLLNDLYIRNEILMEKENHENNFEEENININLILPSIKNI
IVDEAHYLEEAARSLFNKNFSKTGIKQIFIKIDKIIKRQNINNIYKKDFEIFTIQNFENIEYIINTQEKLPSIYRITSDT
HKTNFYIRIKTYLQNIIYNLENYQITIRSIIQNIENKTAKIELNRLIKNLDQKKLLIQNFISENQDDNLCFWIDNKKNIP
LFQTSEIYLGPELNKIMYQRTKRIIFTSATIIINQSFSYFLNQTGLNLSNKHIEMENLPYSFPYQEKSILTITSDIENPN
NEEEFLNQSTKYIKELVILNKGGTLILLTSLKSLEYISKNIKDFLFENDINIFIQGQLPKNELINSFKKSPKKSVLIGIK
NFWEGIDIKGDQLTMIIIPKLPFQTPSDPILIAKNELAKKTNENFFIKETLPQAIMKFKQGFGRLIRDSKDYGIIVCFDK
RICNKTYGKSFLKSLPKIKTYYSNFTTIKHTINTFFKIDQNINP

Sequences:

>Translated_684_residues
MNLSEYIIQQAELNIKGFVRRDTQLRMIDKIKQTFRDENFLVIEAPTGTGKSFAYLIAAIDFIHQTKEKVIISTSSINLQ
EQLIKKDIKSLKRIIPFKIKFGIIKGMKNYICLRRLEELKKSLLAHTLNKKNLETLIYWAQNTKTGDKDELNFIDEQIWE
EVSANPETCSEITCPNENKCLFKKARNKILKCDIIITNHHLLLNDLYIRNEILMEKENHENNFEEENININLILPSIKNI
IVDEAHYLEEAARSLFNKNFSKTGIKQIFIKIDKIIKRQNINNIYKKDFEIFTIQNFENIEYIINTQEKLPSIYRITSDT
HKTNFYIRIKTYLQNIIYNLENYQITIRSIIQNIENKTAKIELNRLIKNLDQKKLLIQNFISENQDDNLCFWIDNKKNIP
LFQTSEIYLGPELNKIMYQRTKRIIFTSATIIINQSFSYFLNQTGLNLSNKHIEMENLPYSFPYQEKSILTITSDIENPN
NEEEFLNQSTKYIKELVILNKGGTLILLTSLKSLEYISKNIKDFLFENDINIFIQGQLPKNELINSFKKSPKKSVLIGIK
NFWEGIDIKGDQLTMIIIPKLPFQTPSDPILIAKNELAKKTNENFFIKETLPQAIMKFKQGFGRLIRDSKDYGIIVCFDK
RICNKTYGKSFLKSLPKIKTYYSNFTTIKHTINTFFKIDQNINP
>Mature_684_residues
MNLSEYIIQQAELNIKGFVRRDTQLRMIDKIKQTFRDENFLVIEAPTGTGKSFAYLIAAIDFIHQTKEKVIISTSSINLQ
EQLIKKDIKSLKRIIPFKIKFGIIKGMKNYICLRRLEELKKSLLAHTLNKKNLETLIYWAQNTKTGDKDELNFIDEQIWE
EVSANPETCSEITCPNENKCLFKKARNKILKCDIIITNHHLLLNDLYIRNEILMEKENHENNFEEENININLILPSIKNI
IVDEAHYLEEAARSLFNKNFSKTGIKQIFIKIDKIIKRQNINNIYKKDFEIFTIQNFENIEYIINTQEKLPSIYRITSDT
HKTNFYIRIKTYLQNIIYNLENYQITIRSIIQNIENKTAKIELNRLIKNLDQKKLLIQNFISENQDDNLCFWIDNKKNIP
LFQTSEIYLGPELNKIMYQRTKRIIFTSATIIINQSFSYFLNQTGLNLSNKHIEMENLPYSFPYQEKSILTITSDIENPN
NEEEFLNQSTKYIKELVILNKGGTLILLTSLKSLEYISKNIKDFLFENDINIFIQGQLPKNELINSFKKSPKKSVLIGIK
NFWEGIDIKGDQLTMIIIPKLPFQTPSDPILIAKNELAKKTNENFFIKETLPQAIMKFKQGFGRLIRDSKDYGIIVCFDK
RICNKTYGKSFLKSLPKIKTYYSNFTTIKHTINTFFKIDQNINP

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=656, Percent_Identity=26.9817073170732, Blast_Score=263, Evalue=3e-71,
Organism=Escherichia coli, GI1787018, Length=699, Percent_Identity=25.035765379113, Blast_Score=194, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 80337; Mature: 80337

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSEYIIQQAELNIKGFVRRDTQLRMIDKIKQTFRDENFLVIEAPTGTGKSFAYLIAAI
CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
DFIHQTKEKVIISTSSINLQEQLIKKDIKSLKRIIPFKIKFGIIKGMKNYICLRRLEELK
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHH
KSLLAHTLNKKNLETLIYWAQNTKTGDKDELNFIDEQIWEEVSANPETCSEITCPNENKC
HHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
LFKKARNKILKCDIIITNHHLLLNDLYIRNEILMEKENHENNFEEENININLILPSIKNI
HHHHHCCCEEEEEEEEECCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHH
IVDEAHYLEEAARSLFNKNFSKTGIKQIFIKIDKIIKRQNINNIYKKDFEIFTIQNFENI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCC
EYIINTQEKLPSIYRITSDTHKTNFYIRIKTYLQNIIYNLENYQITIRSIIQNIENKTAK
EEEEECHHHCCCEEEEECCCCCEEEEEEEHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHE
IELNRLIKNLDQKKLLIQNFISENQDDNLCFWIDNKKNIPLFQTSEIYLGPELNKIMYQR
EEHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCEEECCCHHHHHHHH
TKRIIFTSATIIINQSFSYFLNQTGLNLSNKHIEMENLPYSFPYQEKSILTITSDIENPN
HHEEEEEEEEEEEECCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC
NEEEFLNQSTKYIKELVILNKGGTLILLTSLKSLEYISKNIKDFLFENDINIFIQGQLPK
CHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
NELINSFKKSPKKSVLIGIKNFWEGIDIKGDQLTMIIIPKLPFQTPSDPILIAKNELAKK
HHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHH
TNENFFIKETLPQAIMKFKQGFGRLIRDSKDYGIIVCFDKRICNKTYGKSFLKSLPKIKT
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHH
YYSNFTTIKHTINTFFKIDQNINP
HHCCHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MNLSEYIIQQAELNIKGFVRRDTQLRMIDKIKQTFRDENFLVIEAPTGTGKSFAYLIAAI
CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
DFIHQTKEKVIISTSSINLQEQLIKKDIKSLKRIIPFKIKFGIIKGMKNYICLRRLEELK
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHH
KSLLAHTLNKKNLETLIYWAQNTKTGDKDELNFIDEQIWEEVSANPETCSEITCPNENKC
HHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
LFKKARNKILKCDIIITNHHLLLNDLYIRNEILMEKENHENNFEEENININLILPSIKNI
HHHHHCCCEEEEEEEEECCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHH
IVDEAHYLEEAARSLFNKNFSKTGIKQIFIKIDKIIKRQNINNIYKKDFEIFTIQNFENI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCC
EYIINTQEKLPSIYRITSDTHKTNFYIRIKTYLQNIIYNLENYQITIRSIIQNIENKTAK
EEEEECHHHCCCEEEEECCCCCEEEEEEEHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHE
IELNRLIKNLDQKKLLIQNFISENQDDNLCFWIDNKKNIPLFQTSEIYLGPELNKIMYQR
EEHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCEEECCCHHHHHHHH
TKRIIFTSATIIINQSFSYFLNQTGLNLSNKHIEMENLPYSFPYQEKSILTITSDIENPN
HHEEEEEEEEEEEECCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC
NEEEFLNQSTKYIKELVILNKGGTLILLTSLKSLEYISKNIKDFLFENDINIFIQGQLPK
CHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
NELINSFKKSPKKSVLIGIKNFWEGIDIKGDQLTMIIIPKLPFQTPSDPILIAKNELAKK
HHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHH
TNENFFIKETLPQAIMKFKQGFGRLIRDSKDYGIIVCFDKRICNKTYGKSFLKSLPKIKT
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHH
YYSNFTTIKHTINTFFKIDQNINP
HHCCHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]