BacMap

Definition	Borrelia duttonii Ly, complete genome.
Accession	NC_011229
Length	931,674

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The map label for this gene is dnaJ-2 [C]

Identifier: 203284553

GI number: 203284553

Start: 706246

End: 707094

Strand: Reverse

Name: dnaJ-2 [C]

Synonym: BDU_658

Alternate gene names: 203284553

Gene position: 707094-706246 (Counterclockwise)

Preceding gene: 203284555

Following gene: 203284546

Centisome position: 75.9

GC content: 24.85

Gene sequence:

>849_bases
ATGTCTAAAGATTACTACAACATACTTGGAGTAAATAAAAATGCTACAACAGAAGAAATAAAAAAAGCCTACAAAAAATT
AGCAATTAAATATCACCCTGATAAAAATAAAGAAAACAAATTTGCAGAAGAAAAATTTAAAGAAATAAATGAAGCTTACG
AAGTTCTATCATCTCCTCAAAAAAAATCTAATTATGACAATTTTGGAAATGCAGATTTTAACAATAACTTTAATACAGAT
TCATTTACTAAAGGATTTAAGAATTCTGGGTTTCAGCATTTTGACAATTTTGATTTATTTTCTGATATTTTTGGAGAATT
TACAAAAGGAACAATTCAAGATAAAGAGGTAACTATTAAAATTTCTTTATATGATGCTTATATGGGAGGCAAAAAATTTA
TATTGATAAATAACGAAAAAATCGAAATTAATATACCAAAAGGCACAATTGATACCACAAAATTAAAATTCAATGGCAAA
GGAAATACCAATCCAATTTCTGGAAAAAGAAGTAACTTAATTATTAAATTTGAAATATCAAGTTATAAAAACTTTACACT
AAAGGATCGAAATTTAGAAACACAAATTAACGTATATCCATGGGAAATAGCTTTAGGGAGTGAAAAAATCTTTGAAACAA
TTGAGGGTAAGAAAATAAAAATCAAAATTCCAAAAAACACAAAAAATGGAGAAATACTTAACTTAAAAGGTCTTGGAATG
CCTGCTCTTGGAAATGCCATTAAAGGAGATCTGAAGGTTAAATTAATAGTAGATGTACCACCAATTATTAATGATGAAGT
TAAAATAATATATGAAAAGCTAAAAGAAATATATAATAAAAAATTTTAA

Upstream 100 bases:

>100_bases
AAAAATTTAAGTTTAATTATAATATATATAATCATAGCATTAAGTATAATGAATTTAACTAACTGCAACATAAAATAGGA
AATAAAAACAAGAGGTTTAA

Downstream 100 bases:

>100_bases
ACAAATAATTGTTCAAAATTTTTCAAACTTTGCTCCCAATCACGCTTTAGGCTATTAAGTTTATCTATTTTAAGTTCATA
TTCCTTAATGCCTTCTTCAA

Product: heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSKDYYNILGVNKNATTEEIKKAYKKLAIKYHPDKNKENKFAEEKFKEINEAYEVLSSPQKKSNYDNFGNADFNNNFNTD
SFTKGFKNSGFQHFDNFDLFSDIFGEFTKGTIQDKEVTIKISLYDAYMGGKKFILINNEKIEINIPKGTIDTTKLKFNGK
GNTNPISGKRSNLIIKFEISSYKNFTLKDRNLETQINVYPWEIALGSEKIFETIEGKKIKIKIPKNTKNGEILNLKGLGM
PALGNAIKGDLKVKLIVDVPPIINDEVKIIYEKLKEIYNKKF

Sequences:

>Translated_282_residues
MSKDYYNILGVNKNATTEEIKKAYKKLAIKYHPDKNKENKFAEEKFKEINEAYEVLSSPQKKSNYDNFGNADFNNNFNTD
SFTKGFKNSGFQHFDNFDLFSDIFGEFTKGTIQDKEVTIKISLYDAYMGGKKFILINNEKIEINIPKGTIDTTKLKFNGK
GNTNPISGKRSNLIIKFEISSYKNFTLKDRNLETQINVYPWEIALGSEKIFETIEGKKIKIKIPKNTKNGEILNLKGLGM
PALGNAIKGDLKVKLIVDVPPIINDEVKIIYEKLKEIYNKKF
>Mature_281_residues
SKDYYNILGVNKNATTEEIKKAYKKLAIKYHPDKNKENKFAEEKFKEINEAYEVLSSPQKKSNYDNFGNADFNNNFNTDS
FTKGFKNSGFQHFDNFDLFSDIFGEFTKGTIQDKEVTIKISLYDAYMGGKKFILINNEKIEINIPKGTIDTTKLKFNGKG
NTNPISGKRSNLIIKFEISSYKNFTLKDRNLETQINVYPWEIALGSEKIFETIEGKKIKIKIPKNTKNGEILNLKGLGMP
ALGNAIKGDLKVKLIVDVPPIINDEVKIIYEKLKEIYNKKF

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=334, Percent_Identity=27.8443113772455, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI201862587, Length=350, Percent_Identity=27.7142857142857, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI201862518, Length=350, Percent_Identity=27.7142857142857, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI7706495, Length=307, Percent_Identity=27.6872964169381, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI56549115, Length=350, Percent_Identity=27.7142857142857, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI205360840, Length=250, Percent_Identity=30.4, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI205360838, Length=250, Percent_Identity=30.4, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI5453690, Length=354, Percent_Identity=28.5310734463277, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI9558755, Length=108, Percent_Identity=48.1481481481481, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI47777312, Length=108, Percent_Identity=44.4444444444444, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI194306642, Length=108, Percent_Identity=44.4444444444444, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI194306640, Length=108, Percent_Identity=44.4444444444444, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=60.6060606060606, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=60.6060606060606, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI194328758, Length=164, Percent_Identity=38.4146341463415, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI56687498, Length=104, Percent_Identity=43.2692307692308, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21553335, Length=94, Percent_Identity=50, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI194328760, Length=164, Percent_Identity=38.4146341463415, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI23503241, Length=102, Percent_Identity=43.1372549019608, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI27151736, Length=114, Percent_Identity=39.4736842105263, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI88501736, Length=67, Percent_Identity=55.2238805970149, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=53.8461538461538, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4504511, Length=65, Percent_Identity=60, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI68077168, Length=85, Percent_Identity=48.2352941176471, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI68077166, Length=85, Percent_Identity=48.2352941176471, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI29126218, Length=65, Percent_Identity=55.3846153846154, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI39204547, Length=69, Percent_Identity=49.2753623188406, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI72534740, Length=114, Percent_Identity=42.1052631578947, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI217035105, Length=70, Percent_Identity=44.2857142857143, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI22749377, Length=69, Percent_Identity=50.7246376811594, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI5031741, Length=64, Percent_Identity=57.8125, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI24308127, Length=74, Percent_Identity=45.945945945946, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI221219056, Length=90, Percent_Identity=47.7777777777778, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI262206280, Length=90, Percent_Identity=47.7777777777778, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1787235, Length=298, Percent_Identity=29.5302013422819, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786197, Length=354, Percent_Identity=27.4011299435028, Blast_Score=126, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17534355, Length=324, Percent_Identity=28.3950617283951, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI212645553, Length=69, Percent_Identity=50.7246376811594, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17554644, Length=74, Percent_Identity=48.6486486486487, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115532476, Length=70, Percent_Identity=51.4285714285714, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115532378, Length=103, Percent_Identity=39.8058252427184, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568643, Length=65, Percent_Identity=58.4615384615385, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17553096, Length=256, Percent_Identity=27.34375, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17553098, Length=256, Percent_Identity=27.34375, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538236, Length=92, Percent_Identity=40.2173913043478, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=50.7936507936508, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI86563276, Length=108, Percent_Identity=37.037037037037, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17563890, Length=64, Percent_Identity=53.125, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323119, Length=146, Percent_Identity=39.041095890411, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323870, Length=103, Percent_Identity=47.5728155339806, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324265, Length=65, Percent_Identity=60, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320888, Length=105, Percent_Identity=41.9047619047619, Blast_Score=80, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6323813, Length=92, Percent_Identity=48.9130434782609, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=51.5625, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322194, Length=102, Percent_Identity=38.2352941176471, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324103, Length=68, Percent_Identity=51.4705882352941, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324252, Length=67, Percent_Identity=46.2686567164179, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322388, Length=69, Percent_Identity=50.7246376811594, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19920464, Length=304, Percent_Identity=25.9868421052632, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI85726398, Length=111, Percent_Identity=48.6486486486487, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24658562, Length=117, Percent_Identity=45.2991452991453, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24658555, Length=117, Percent_Identity=45.2991452991453, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI45552811, Length=269, Percent_Identity=29.368029739777, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI45549272, Length=269, Percent_Identity=29.368029739777, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI45552813, Length=269, Percent_Identity=29.368029739777, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24654066, Length=98, Percent_Identity=42.8571428571429, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654070, Length=98, Percent_Identity=42.8571428571429, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654068, Length=98, Percent_Identity=42.8571428571429, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654072, Length=98, Percent_Identity=42.8571428571429, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646562, Length=86, Percent_Identity=51.1627906976744, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646560, Length=86, Percent_Identity=51.1627906976744, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646558, Length=86, Percent_Identity=51.1627906976744, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646556, Length=86, Percent_Identity=51.1627906976744, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357547, Length=86, Percent_Identity=51.1627906976744, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI18858081, Length=352, Percent_Identity=25.2840909090909, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=49.2753623188406, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=55.3846153846154, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=55.3846153846154, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=55.3846153846154, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=56.25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24641698, Length=66, Percent_Identity=53.030303030303, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641696, Length=66, Percent_Identity=53.030303030303, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17648033, Length=104, Percent_Identity=44.2307692307692, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24584630, Length=104, Percent_Identity=44.2307692307692, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI20129487, Length=139, Percent_Identity=37.410071942446, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584014, Length=139, Percent_Identity=37.410071942446, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651439, Length=75, Percent_Identity=40, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24762799, Length=117, Percent_Identity=38.4615384615385, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21358273, Length=68, Percent_Identity=55.8823529411765, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355911, Length=67, Percent_Identity=50.7462686567164, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21358311, Length=75, Percent_Identity=40, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24651436, Length=75, Percent_Identity=40, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 32333; Mature: 32202

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDYYNILGVNKNATTEEIKKAYKKLAIKYHPDKNKENKFAEEKFKEINEAYEVLSSPQ
CCCCEEEEEECCCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
KKSNYDNFGNADFNNNFNTDSFTKGFKNSGFQHFDNFDLFSDIFGEFTKGTIQDKEVTIK
HHCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
ISLYDAYMGGKKFILINNEKIEINIPKGTIDTTKLKFNGKGNTNPISGKRSNLIIKFEIS
EEEEEEECCCEEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEC
SYKNFTLKDRNLETQINVYPWEIALGSEKIFETIEGKKIKIKIPKNTKNGEILNLKGLGM
CCCCEEEECCCCCEEEEEEEEEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCC
PALGNAIKGDLKVKLIVDVPPIINDEVKIIYEKLKEIYNKKF
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKDYYNILGVNKNATTEEIKKAYKKLAIKYHPDKNKENKFAEEKFKEINEAYEVLSSPQ
CCCEEEEEECCCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
KKSNYDNFGNADFNNNFNTDSFTKGFKNSGFQHFDNFDLFSDIFGEFTKGTIQDKEVTIK
HHCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
ISLYDAYMGGKKFILINNEKIEINIPKGTIDTTKLKFNGKGNTNPISGKRSNLIIKFEIS
EEEEEEECCCEEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEC
SYKNFTLKDRNLETQINVYPWEIALGSEKIFETIEGKKIKIKIPKNTKNGEILNLKGLGM
CCCCEEEECCCCCEEEEEEEEEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCC
PALGNAIKGDLKVKLIVDVPPIINDEVKIIYEKLKEIYNKKF
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]