| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is pepX [H]
Identifier: 203284527
GI number: 203284527
Start: 670279
End: 671547
Strand: Reverse
Name: pepX [H]
Synonym: BDU_631
Alternate gene names: 203284527
Gene position: 671547-670279 (Counterclockwise)
Preceding gene: 203284529
Following gene: 203284524
Centisome position: 72.08
GC content: 29.47
Gene sequence:
>1269_bases ATGCATGATGCAACATTAGATATATCACATTTTCAAAATTTACTAGATAAAAGCTTAACACCATACCATCTAATCAATTA TATCGAACAAAAATTATTATATTATCTTAATGCCAAAGAACTTAAACTTAATGAAAAATGGAAATTAGAAACGGGATATT ATTACATAAAAAAAGAAGGAACAAGTCTTATTGCATTCAATATTAACACCAATAAAATACACGAACCATTTCTAATATCA TCAGCCCATTCTGACAGTCCTGCATTAAAACTTAAAATAGAATCTAGCAAAAACGAAGGTAATGTATTCTCTCAACATAT TGAAATTTACGGTGGCCCAATAATCTCAACTTGGACTGATAGAGACTTAAGTTTAGCAGGAATTGTATATTTCATGAAAG AAGGAATAATTAATTCACAATTAATCACAATTGACAATATCGGTACTATACCAAATGTAGCGATACACCTAAACAGAAAA GCAAATGAAGGATTTACATATAACACTCATGAAAATATAGTTGTTATAACAAGTTTTAAAAAAAGTATTAAAGAAATTAT CCTAGAAAAATTACAAATATCTCAACAAGATTTCTTATCATGTGATTTAATATTCACAGCCTCTGAACCTTCTAAAATTA TAGGCAGTGAAGGTGAATTTTTAGCATCAAAAAATCTTGACAACAAATCAGGATGTCATGCCATAATGAATGCATTTGTT CACACAAATAACAAAAAAAACAAAGTGGCTGTATTTTTTGACAATGAAGAAATTGGATCTCTAACGTCTAGAGGAGCTAA TTCAACACTACTAACAGAAATTTTAGAAAGAATAGATTATGTCTTAAATTTAGGACAAGAAGAACATATGATCAAACTCC AAAAATCATTTAATATCTCAATGGATGGAGCACATGGAATACATCCAGGATACACATGTAAACATGACCCCTACTACAAA ACAAGTCTAGGGAAAGGTGTGGCTATTAAAAGCAATGCCAATTTTAAATATGCAACAACAGCAAATGGATGGGCAAAACT TAAAGCTTTAGCTATAAAAAATAATATTAAAATTCAAGAAATACTAATGAAAGCAGATACAAATTCCGGAAGCACAATTG GTCCAATTGCAAACTCAAAAACAGGTATTGAAACAATAGATATTGGCACTCCAATGTGGGGAATGCACTCTTTAAGAGAA ACTATTGCAATATCAGATCACATAGAAGCAATTAAACTTTTAAGAACATTTTTTGAAAATTGGAATTAA
Upstream 100 bases:
>100_bases ACAATCTCCTTAGCACATATACACAAACCTATATACATGTACAAGCTATTATAATAAAATATTAAATATTAAAACAATAA AACCAAAGGGGAAAGAACAA
Downstream 100 bases:
>100_bases AATCTGAAACACATAAAAGAAATAATTGTAGTTGAAGGCAAAGACGATGCTAAGAAAATAAAAGCTCTATTTAAATGCAC TATAATTGAAACTGGTGGGT
Product: putative aminopeptidase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MHDATLDISHFQNLLDKSLTPYHLINYIEQKLLYYLNAKELKLNEKWKLETGYYYIKKEGTSLIAFNINTNKIHEPFLIS SAHSDSPALKLKIESSKNEGNVFSQHIEIYGGPIISTWTDRDLSLAGIVYFMKEGIINSQLITIDNIGTIPNVAIHLNRK ANEGFTYNTHENIVVITSFKKSIKEIILEKLQISQQDFLSCDLIFTASEPSKIIGSEGEFLASKNLDNKSGCHAIMNAFV HTNNKKNKVAVFFDNEEIGSLTSRGANSTLLTEILERIDYVLNLGQEEHMIKLQKSFNISMDGAHGIHPGYTCKHDPYYK TSLGKGVAIKSNANFKYATTANGWAKLKALAIKNNIKIQEILMKADTNSGSTIGPIANSKTGIETIDIGTPMWGMHSLRE TIAISDHIEAIKLLRTFFENWN
Sequences:
>Translated_422_residues MHDATLDISHFQNLLDKSLTPYHLINYIEQKLLYYLNAKELKLNEKWKLETGYYYIKKEGTSLIAFNINTNKIHEPFLIS SAHSDSPALKLKIESSKNEGNVFSQHIEIYGGPIISTWTDRDLSLAGIVYFMKEGIINSQLITIDNIGTIPNVAIHLNRK ANEGFTYNTHENIVVITSFKKSIKEIILEKLQISQQDFLSCDLIFTASEPSKIIGSEGEFLASKNLDNKSGCHAIMNAFV HTNNKKNKVAVFFDNEEIGSLTSRGANSTLLTEILERIDYVLNLGQEEHMIKLQKSFNISMDGAHGIHPGYTCKHDPYYK TSLGKGVAIKSNANFKYATTANGWAKLKALAIKNNIKIQEILMKADTNSGSTIGPIANSKTGIETIDIGTPMWGMHSLRE TIAISDHIEAIKLLRTFFENWN >Mature_422_residues MHDATLDISHFQNLLDKSLTPYHLINYIEQKLLYYLNAKELKLNEKWKLETGYYYIKKEGTSLIAFNINTNKIHEPFLIS SAHSDSPALKLKIESSKNEGNVFSQHIEIYGGPIISTWTDRDLSLAGIVYFMKEGIINSQLITIDNIGTIPNVAIHLNRK ANEGFTYNTHENIVVITSFKKSIKEIILEKLQISQQDFLSCDLIFTASEPSKIIGSEGEFLASKNLDNKSGCHAIMNAFV HTNNKKNKVAVFFDNEEIGSLTSRGANSTLLTEILERIDYVLNLGQEEHMIKLQKSFNISMDGAHGIHPGYTCKHDPYYK TSLGKGVAIKSNANFKYATTANGWAKLKALAIKNNIKIQEILMKADTNSGSTIGPIANSKTGIETIDIGTPMWGMHSLRE TIAISDHIEAIKLLRTFFENWN
Specific function: Unknown
COG id: COG1362
COG function: function code E; Aspartyl aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M18 family [H]
Homologues:
Organism=Homo sapiens, GI156416028, Length=444, Percent_Identity=30.6306306306306, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17552916, Length=447, Percent_Identity=30.2013422818792, Blast_Score=193, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321905, Length=461, Percent_Identity=32.7548806941432, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6322746, Length=458, Percent_Identity=26.2008733624454, Blast_Score=126, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022984 - InterPro: IPR001948 [H]
Pfam domain/function: PF02127 Peptidase_M18 [H]
EC number: NA
Molecular weight: Translated: 47377; Mature: 47377
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDATLDISHFQNLLDKSLTPYHLINYIEQKLLYYLNAKELKLNEKWKLETGYYYIKKEG CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCEEEEEECC TSLIAFNINTNKIHEPFLISSAHSDSPALKLKIESSKNEGNVFSQHIEIYGGPIISTWTD CEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECCEEEECCCC RDLSLAGIVYFMKEGIINSQLITIDNIGTIPNVAIHLNRKANEGFTYNTHENIVVITSFK CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCEEEEEHHH KSIKEIILEKLQISQQDFLSCDLIFTASEPSKIIGSEGEFLASKNLDNKSGCHAIMNAFV HHHHHHHHHHHHCCHHHCCEEEEEEECCCCHHHCCCCCCEEEECCCCCCCHHHHHHHHHH HTNNKKNKVAVFFDNEEIGSLTSRGANSTLLTEILERIDYVLNLGQEEHMIKLQKSFNIS CCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEEHHCCEE MDGAHGIHPGYTCKHDPYYKTSLGKGVAIKSNANFKYATTANGWAKLKALAIKNNIKIQE ECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCEEEEECCCCHHEEEEEEEECCCCHHH ILMKADTNSGSTIGPIANSKTGIETIDIGTPMWGMHSLRETIAISDHIEAIKLLRTFFEN HHEECCCCCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC WN CC >Mature Secondary Structure MHDATLDISHFQNLLDKSLTPYHLINYIEQKLLYYLNAKELKLNEKWKLETGYYYIKKEG CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCEEEEEECC TSLIAFNINTNKIHEPFLISSAHSDSPALKLKIESSKNEGNVFSQHIEIYGGPIISTWTD CEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECCEEEECCCC RDLSLAGIVYFMKEGIINSQLITIDNIGTIPNVAIHLNRKANEGFTYNTHENIVVITSFK CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCEEEEEHHH KSIKEIILEKLQISQQDFLSCDLIFTASEPSKIIGSEGEFLASKNLDNKSGCHAIMNAFV HHHHHHHHHHHHCCHHHCCEEEEEEECCCCHHHCCCCCCEEEECCCCCCCHHHHHHHHHH HTNNKKNKVAVFFDNEEIGSLTSRGANSTLLTEILERIDYVLNLGQEEHMIKLQKSFNIS CCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEEHHCCEE MDGAHGIHPGYTCKHDPYYKTSLGKGVAIKSNANFKYATTANGWAKLKALAIKNNIKIQE ECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCEEEEECCCCHHEEEEEEEECCCCHHH ILMKADTNSGSTIGPIANSKTGIETIDIGTPMWGMHSLRETIAISDHIEAIKLLRTFFEN HHEECCCCCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC WN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]