| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is napA_1 [H]
Identifier: 203284357
GI number: 203284357
Start: 480231
End: 482351
Strand: Reverse
Name: napA_1 [H]
Synonym: BDU_446
Alternate gene names: 203284357
Gene position: 482351-480231 (Counterclockwise)
Preceding gene: 203284358
Following gene: 203284356
Centisome position: 51.77
GC content: 26.87
Gene sequence:
>2121_bases ATGAGAAAGAAACTTTTATATACAATATTGTTTAACATAAATCCTATTCTTTCATTTGGAATGGTAGACTATATGAAAGA CACGGGACATAACATTGATGCCAAAATCTCTTCTTTTATAATGAGTCTAGCAATCATTGTAATATCAGCAAGTCTTCTTG GCAATTTGGTAAATAGATTTGGAATTCCAAAAGTAATAGGACAAATAACAGCAGGAATACTTTTAAGTCCAACATGTCTT GGTAAAATTAAAGTACCTTTATTATTTCCATTAGGAATCATTAATAGCGGAGAAAATTATCTAATAAATGAAGACATATT TGCAATATCAACAATAGCTTCAATAATACTACTATTTATGGCAGGTCTTGAGACAGATCTAAAATTATTTCTTAAGTTTT TACCACGTGGAGGATTAATAGGTATAACAGAAGTAATTGGTACTTTTACAAGTTTTGCACTAATATCCACCATTTTATTT GATGTACAATTAATAAATCCCACATCTCTTTTTATAGGAATTATTGCAACACCTTCTTCTGCAGGCATTGCTGCAAGCAT ACTCTCAGCAAAGAAAAAAATGAGTACATCAGAAGGAGTTACAATAATATCAACATCAATAATTGATGATGTCCTCTCAA TGATTATGCTCACAAGTGTAATTACAATATCGAGATCTCTATCTGATCTTGACATTACAATTTCAATTAGATCTACAATT CAAAACATATTAATTTGGTTTTGTTTAACATTCATACTGATCTTACTATCAAAACCAATTTCACAATTACTAAAAAGCTT TAATAGTGTAACCTTAGCAACTGTAATAACTCTTACATTTACCTTTATTATTTCAAGTATTTTTCAAAATTTAGGAATGT CATTTGTAATTGGAGCTTACATATTTGGGCTTGCAATGTCAAAAACAGATATTGTATATGTAATTCAGGATAAATTAACA CTATTTGAAAGATTTTTTATACCAATATTCTTCACATCAATAGGAATGATGGCCGATATTAACGTAATATTATCAAAAGA AGTTTTAATAATTGGCACTTTGCTTAGTTTGATAGCAATAGCAACAAAAGTAGTATATTGCTTTATCCCATCATACTTTT TAGGATTTAACAAACTAGGTGCACTAAGAATAGCTTTTGGAATGGTTCCAAGAGGTGAAATATCACTAATTATTGCAAAT GTAGCTCTCTCTTCCGAATTTATAAGCCAAAAAATATTTGGAATAATAATAATTATAGTTTTTCTTCCAACAATTATCGC AACACCAATAATAAATATCTTATTTCAAATAAATAAAAATGGATTAAAGAAAGAAATGAAAATAGAACAAAATACTCAAA TTACAATAGCACTGAAATATGATAATCTAACAAAAATATTTGTATGGGACTTAAAAAACGAGTTAAGAAACGAAGGATTT TTTACACAACAAATAAAAAATGATTTCTCACAATACATAAATGCAAGACGAAATGATATATCACTTTCAATTAAAAGAGA AGGAAGCAAAATCACATTTGAATGTCCAAAAAAACATTTAATAATCATACAAGATCTACTAAGAGAAACTATTTTAAATT TAGAAAAAATCACAGAAGAAGTAAAAATAGTTTCTGTAAAAGCACAAAAATTAAATTACTCAATAAACTACGATAAAATA CGCAGTAATATTGCTTTAGATAAAAGAATAAAAAAAGAAAATATAATATTAAATTTAAAAGCAACAAATAAAATTGAAGT ACTAAGAGAATTACTTAGTATAATAAAAGTTGACATTGACAAAGAAACAATATTACAAGACCTCATGGAGAGAGAAAAAC TTATAACCACAGCTCTCAAAGAAGGATTTGCAATACCTCACTTAAAAACTAATTTAATAAAAAAAATGCACATTGCAATC GGAATCAGCCACGATGGAATTGACTTTAATGCTATTGATAAAAATTTAAGTTATATCTTTATATTAATATTATACCCAGC AAAAGAACATGTTAATTATCCACGCATTTTATCATCTATTGTAGGTAAAGTAGATTCTAATAAAAAAGCAATGCTTAAAG CTAAAACTGACAAAGAAATTTATAACATATTAATAGGATAG
Upstream 100 bases:
>100_bases AAGAAAAAATAACAATTGTTGCAAATGGTAAAGACGAAATTGAAATAATTGATGAGCTAAAAAAATTAATACAATCAAAC TTTAAAAAAGAGATTCAAAA
Downstream 100 bases:
>100_bases GTTATGTTTAAAATCATTAAATGCAATCAAATAAATAATAAACTTATAAATAAAAAGATAGAAATAAATGGATGGGTAAA AAAAATAAGAAATCATGGAA
Product: Na+/H+ antiporter
Products: protein histidine; sugarphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MRKKLLYTILFNINPILSFGMVDYMKDTGHNIDAKISSFIMSLAIIVISASLLGNLVNRFGIPKVIGQITAGILLSPTCL GKIKVPLLFPLGIINSGENYLINEDIFAISTIASIILLFMAGLETDLKLFLKFLPRGGLIGITEVIGTFTSFALISTILF DVQLINPTSLFIGIIATPSSAGIAASILSAKKKMSTSEGVTIISTSIIDDVLSMIMLTSVITISRSLSDLDITISIRSTI QNILIWFCLTFILILLSKPISQLLKSFNSVTLATVITLTFTFIISSIFQNLGMSFVIGAYIFGLAMSKTDIVYVIQDKLT LFERFFIPIFFTSIGMMADINVILSKEVLIIGTLLSLIAIATKVVYCFIPSYFLGFNKLGALRIAFGMVPRGEISLIIAN VALSSEFISQKIFGIIIIIVFLPTIIATPIINILFQINKNGLKKEMKIEQNTQITIALKYDNLTKIFVWDLKNELRNEGF FTQQIKNDFSQYINARRNDISLSIKREGSKITFECPKKHLIIIQDLLRETILNLEKITEEVKIVSVKAQKLNYSINYDKI RSNIALDKRIKKENIILNLKATNKIEVLRELLSIIKVDIDKETILQDLMEREKLITTALKEGFAIPHLKTNLIKKMHIAI GISHDGIDFNAIDKNLSYIFILILYPAKEHVNYPRILSSIVGKVDSNKKAMLKAKTDKEIYNILIG
Sequences:
>Translated_706_residues MRKKLLYTILFNINPILSFGMVDYMKDTGHNIDAKISSFIMSLAIIVISASLLGNLVNRFGIPKVIGQITAGILLSPTCL GKIKVPLLFPLGIINSGENYLINEDIFAISTIASIILLFMAGLETDLKLFLKFLPRGGLIGITEVIGTFTSFALISTILF DVQLINPTSLFIGIIATPSSAGIAASILSAKKKMSTSEGVTIISTSIIDDVLSMIMLTSVITISRSLSDLDITISIRSTI QNILIWFCLTFILILLSKPISQLLKSFNSVTLATVITLTFTFIISSIFQNLGMSFVIGAYIFGLAMSKTDIVYVIQDKLT LFERFFIPIFFTSIGMMADINVILSKEVLIIGTLLSLIAIATKVVYCFIPSYFLGFNKLGALRIAFGMVPRGEISLIIAN VALSSEFISQKIFGIIIIIVFLPTIIATPIINILFQINKNGLKKEMKIEQNTQITIALKYDNLTKIFVWDLKNELRNEGF FTQQIKNDFSQYINARRNDISLSIKREGSKITFECPKKHLIIIQDLLRETILNLEKITEEVKIVSVKAQKLNYSINYDKI RSNIALDKRIKKENIILNLKATNKIEVLRELLSIIKVDIDKETILQDLMEREKLITTALKEGFAIPHLKTNLIKKMHIAI GISHDGIDFNAIDKNLSYIFILILYPAKEHVNYPRILSSIVGKVDSNKKAMLKAKTDKEIYNILIG >Mature_706_residues MRKKLLYTILFNINPILSFGMVDYMKDTGHNIDAKISSFIMSLAIIVISASLLGNLVNRFGIPKVIGQITAGILLSPTCL GKIKVPLLFPLGIINSGENYLINEDIFAISTIASIILLFMAGLETDLKLFLKFLPRGGLIGITEVIGTFTSFALISTILF DVQLINPTSLFIGIIATPSSAGIAASILSAKKKMSTSEGVTIISTSIIDDVLSMIMLTSVITISRSLSDLDITISIRSTI QNILIWFCLTFILILLSKPISQLLKSFNSVTLATVITLTFTFIISSIFQNLGMSFVIGAYIFGLAMSKTDIVYVIQDKLT LFERFFIPIFFTSIGMMADINVILSKEVLIIGTLLSLIAIATKVVYCFIPSYFLGFNKLGALRIAFGMVPRGEISLIIAN VALSSEFISQKIFGIIIIIVFLPTIIATPIINILFQINKNGLKKEMKIEQNTQITIALKYDNLTKIFVWDLKNELRNEGF FTQQIKNDFSQYINARRNDISLSIKREGSKITFECPKKHLIIIQDLLRETILNLEKITEEVKIVSVKAQKLNYSINYDKI RSNIALDKRIKKENIILNLKATNKIEVLRELLSIIKVDIDKETILQDLMEREKLITTALKEGFAIPHLKTNLIKKMHIAI GISHDGIDFNAIDKNLSYIFILILYPAKEHVNYPRILSSIVGKVDSNKKAMLKAKTDKEIYNILIG
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=443, Percent_Identity=25.2821670428894, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 78821; Mature: 78821
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLLYTILFNINPILSFGMVDYMKDTGHNIDAKISSFIMSLAIIVISASLLGNLVNRF CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIPKVIGQITAGILLSPTCLGKIKVPLLFPLGIINSGENYLINEDIFAISTIASIILLFM CHHHHHHHHHHHHHCCCCCCCCEEECEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHH AGLETDLKLFLKFLPRGGLIGITEVIGTFTSFALISTILFDVQLINPTSLFIGIIATPSS HCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCC AGIAASILSAKKKMSTSEGVTIISTSIIDDVLSMIMLTSVITISRSLSDLDITISIRSTI CCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH QNILIWFCLTFILILLSKPISQLLKSFNSVTLATVITLTFTFIISSIFQNLGMSFVIGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IFGLAMSKTDIVYVIQDKLTLFERFFIPIFFTSIGMMADINVILSKEVLIIGTLLSLIAI HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ATKVVYCFIPSYFLGFNKLGALRIAFGMVPRGEISLIIANVALSSEFISQKIFGIIIIIV HHHHHHHHHHHHHHCHHHCCHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH FLPTIIATPIINILFQINKNGLKKEMKIEQNTQITIALKYDNLTKIFVWDLKNELRNEGF HHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCEEEEEEEECCCEEEEEEEHHHHHCCCCC FTQQIKNDFSQYINARRNDISLSIKREGSKITFECPKKHLIIIQDLLRETILNLEKITEE HHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH VKIVSVKAQKLNYSINYDKIRSNIALDKRIKKENIILNLKATNKIEVLRELLSIIKVDID HHEEEEEHHHCCEECCHHHHHHCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCC KETILQDLMEREKLITTALKEGFAIPHLKTNLIKKMHIAIGISHDGIDFNAIDKNLSYIF HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCHHHCCCCEEEE ILILYPAKEHVNYPRILSSIVGKVDSNKKAMLKAKTDKEIYNILIG EEEEECCHHHCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure MRKKLLYTILFNINPILSFGMVDYMKDTGHNIDAKISSFIMSLAIIVISASLLGNLVNRF CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIPKVIGQITAGILLSPTCLGKIKVPLLFPLGIINSGENYLINEDIFAISTIASIILLFM CHHHHHHHHHHHHHCCCCCCCCEEECEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHH AGLETDLKLFLKFLPRGGLIGITEVIGTFTSFALISTILFDVQLINPTSLFIGIIATPSS HCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCC AGIAASILSAKKKMSTSEGVTIISTSIIDDVLSMIMLTSVITISRSLSDLDITISIRSTI CCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH QNILIWFCLTFILILLSKPISQLLKSFNSVTLATVITLTFTFIISSIFQNLGMSFVIGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IFGLAMSKTDIVYVIQDKLTLFERFFIPIFFTSIGMMADINVILSKEVLIIGTLLSLIAI HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ATKVVYCFIPSYFLGFNKLGALRIAFGMVPRGEISLIIANVALSSEFISQKIFGIIIIIV HHHHHHHHHHHHHHCHHHCCHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH FLPTIIATPIINILFQINKNGLKKEMKIEQNTQITIALKYDNLTKIFVWDLKNELRNEGF HHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCEEEEEEEECCCEEEEEEEHHHHHCCCCC FTQQIKNDFSQYINARRNDISLSIKREGSKITFECPKKHLIIIQDLLRETILNLEKITEE HHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH VKIVSVKAQKLNYSINYDKIRSNIALDKRIKKENIILNLKATNKIEVLRELLSIIKVDID HHEEEEEHHHCCEECCHHHHHHCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCC KETILQDLMEREKLITTALKEGFAIPHLKTNLIKKMHIAIGISHDGIDFNAIDKNLSYIF HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCHHHCCCCEEEE ILILYPAKEHVNYPRILSSIVGKVDSNKKAMLKAKTDKEIYNILIG EEEEECCHHHCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein Npi-phosphohistidine; sugar [C]
Specific reaction: Protein Npi-phosphohistidine + sugar = protein histidine + sugarphosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]