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The map label for this gene is nusG [H]

Identifier: 203284306

GI number: 203284306

Start: 419986

End: 420540

Strand: Reverse

Name: nusG [H]

Synonym: BDU_388

Alternate gene names: 203284306

Gene position: 420540-419986 (Counterclockwise)

Preceding gene: 203284307

Following gene: 203284305

Centisome position: 45.14

GC content: 32.25

Gene sequence:

>555_bases
ATGTCTAGGGCCTGGTATGTGCTACAAACTTTTTCTCAGTATGAGAAAAAAATAGAACAGGAAATAAAGCTTTTAATTAG
TGAAGGTGTTTTTGGTAATAATGTTTTGGATGTTAAAGCTCCTATTGAGAGAGTAGAAGAGATAAGAAATGGAAAGAAAC
GTATACGTGAGAGAAAGATTTGGCCAGGGTATATATTGATTGAATTAGATCTTTCCGATCAGGAGTGGAAAAGTACTGTA
GCTAATATTATTAAAATATCAGGTGTTGTAAATTTTGTTGGTACTACTAAAGAACAAAAACCTCTTCCAATTAGTGATGA
GGAAGTTAAGAGTGTCTTTATGCTTGCTGGAGAGATTAAAGCAGATAAATCTATTTTTATACTTTATGATTTTGAAGAAG
GTGAGAGAGTAAGAATTAAGGGAGGCCCTTTTGATTCTTTTGAGGGTGTTATTGGATCCATTGATTATGAGAAGAAAAAA
TTGAAAGTTGCAGTTCAAATTTTTGGAAGGTCAACTCCTGTTGAAGTTGATTTTCAACATATAGAAAAAATTTAG

Upstream 100 bases:

>100_bases
AAACAAGTTTTTTGGTTGGTTGTTTTTATTTCTGTTTTTTTAGGTGCGGTAGATTATATCATGTATCTTGTTATAACCTA
TATATTTTAAGGAAAAAATT

Downstream 100 bases:

>100_bases
CAATAAGTTTATAAATGGGAGCTTTAAGAGCGTTATTTACCATAAGGAGTTTTTTATGTCTAAGAAAAAAAAGGAAGTTG
CTTGGGTTAAACTTCAAGTT

Product: transcription antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRNGKKRIRERKIWPGYILIELDLSDQEWKSTV
ANIIKISGVVNFVGTTKEQKPLPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGVIGSIDYEKKK
LKVAVQIFGRSTPVEVDFQHIEKI

Sequences:

>Translated_184_residues
MSRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRNGKKRIRERKIWPGYILIELDLSDQEWKSTV
ANIIKISGVVNFVGTTKEQKPLPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGVIGSIDYEKKK
LKVAVQIFGRSTPVEVDFQHIEKI
>Mature_183_residues
SRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRNGKKRIRERKIWPGYILIELDLSDQEWKSTVA
NIIKISGVVNFVGTTKEQKPLPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGVIGSIDYEKKKL
KVAVQIFGRSTPVEVDFQHIEKI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=186, Percent_Identity=41.3978494623656, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21169; Mature: 21038

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRNGKKRIRERKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
WPGYILIELDLSDQEWKSTVANIIKISGVVNFVGTTKEQKPLPISDEEVKSVFMLAGEIK
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
ADKSIFILYDFEEGERVRIKGGPFDSFEGVIGSIDYEKKKLKVAVQIFGRSTPVEVDFQH
CCCEEEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCHHHHEEEEEEECCCCCCEECHHH
IEKI
HCCC
>Mature Secondary Structure 
SRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRNGKKRIRERKI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
WPGYILIELDLSDQEWKSTVANIIKISGVVNFVGTTKEQKPLPISDEEVKSVFMLAGEIK
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
ADKSIFILYDFEEGERVRIKGGPFDSFEGVIGSIDYEKKKLKVAVQIFGRSTPVEVDFQH
CCCEEEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCHHHHEEEEEEECCCCCCEECHHH
IEKI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]