| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284267
Identifier: 203284267
GI number: 203284267
Start: 373846
End: 375444
Strand: Reverse
Name: 203284267
Synonym: BDU_349
Alternate gene names: NA
Gene position: 375444-373846 (Counterclockwise)
Preceding gene: 203284269
Following gene: 203284266
Centisome position: 40.3
GC content: 25.64
Gene sequence:
>1599_bases TTGATAACTTTAAATTTTGTATTCAAAAGGAGAGCTATTAATGTGAGTTTAGTTGATTTTTTAGTTGCTATTTTTAATAG AGAACGTACTCCTGAGCAAGTGAAGCAGAGAAGGCTTAAAGAAGTAAAAAAAAGTTTAAGTAAGTCAAGTAATTTTTTTA GCGTTTCCAAAATACAAGCTTTACCTCAGTTTGCTAAGTTTATTTATAATCTTTATAAGGTTTTTTTTCCTTTAAAGTTA TTTGTGCAAAGATATCGAAATTCAAATGAGATAATTCATTTTGTAGTTGAGAAGTATTTAAATAGTACTCAAAAGCAAGC TTTGGAACATATTTATTCTTTCTCTGCTAATGAGATAGTAAATTTTACATCTGATATGCTGAAAAATTTGGATACCAATT TAAATTATTTATTGAAAAGTATAACTCAGGAACAGGTCAGATTGATCGATGAAACCTGTGGAGCTTTAGATATCTTTTTT GATTTAGCTTCATATCAGTATTATATTCTTATTAAGCATTTTGATAGTTTATTTCCAGAAGATGATTTTATATATAAACC TAGATTTAGTGCTGTCAGTTGTGGAGTAATCCTTGATGATATTAAGGATTATTTGGAATGTATTTATTCTATTAAGGATA TTTCTATTTGGAGAAATCTTTATGATATTCTCTTAAAAATATATGGAGATGAAGATAATTTTCCTATGAAGCCAAATGTT TGGCTTAAGATGGTAACATCTATAATTGAGATAAATAAAAATAAAGAAATTTTGTATCTTGTAAGATATGTTAGTGGTGA TCCCAATTATTTGCCTATTTCTGGCCTTAAAAAGACAAAAGCAAAAGCGTTTTTTAATTATCTCTCTAAACATGTTTCAA ATGAAATGTTAAAAGCTGAAATTTTGCAAAAAAATAGCAAATCTAAAATTTTGGCAGAAAAATTATTTCCTGGAGTTACT CTTTTAACTTTAGATAATTATAATGAGCATATGAACATGAAAATTACATCTAAAATTACAAATACTACCGGATATGTTTA CGCTGACATTTTAGGTTATTTGAAAACTCATGCTGTTAATTTAGTAAAAAAAGATTTAAATGATATTGTTAATATCCTGA TTATTAAAGGACAATGGAAAGATATGGAAATTTCTAGAGATGTTTCTAATGACATTCATGACTTAGTTAATATTTATTCT AATCTTATTGATTTTGATAATAGTCTTGGGGAACAGGGTAATTATGGCAATAGAATAAATGCACTTTTGCATAGGGTTTA TGTTGGAGGAGACAAATCATCAGAAAAATTATTGTTAAATATAATAGTAGATGTGAATAAAAAAGCTTTAATTTTATTAA ATGACTATTATTCAAAAATTTATTCTTTAAAACAGCTTTTAAGTGGTTGTTTAGAAGATTATTTTAAACCTTCTTCAGAA AAGGAACTTATTTATAATTGGAAAGAACTTGATCTTGAACTTGTAAAAAGTTATGGCAATAATGTAAACTTTGGTAGTAT AATTAAAAATATCATTGAAGGATTAACTTTATTTTTAAAGTTAATGGATTTGTATCTAACTAAGAAAAATGGAATTTAG
Upstream 100 bases:
>100_bases AATTTCTTTATATACATAAAAAATATGTTTATTACATTGACTTTTATTTTACAATAAATTATGTATAATTTTTATAGTTA TTTTATAATTTTGGGTATCT
Downstream 100 bases:
>100_bases GAGATTTAGATGGGGAGAGAATGTGAAATTACAGGAAAAAGGACAATGTTTGGGAATAATGTTCCACGAAAGGGACTTGC CAAAAAGAAAGGTGGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MITLNFVFKRRAINVSLVDFLVAIFNRERTPEQVKQRRLKEVKKSLSKSSNFFSVSKIQALPQFAKFIYNLYKVFFPLKL FVQRYRNSNEIIHFVVEKYLNSTQKQALEHIYSFSANEIVNFTSDMLKNLDTNLNYLLKSITQEQVRLIDETCGALDIFF DLASYQYYILIKHFDSLFPEDDFIYKPRFSAVSCGVILDDIKDYLECIYSIKDISIWRNLYDILLKIYGDEDNFPMKPNV WLKMVTSIIEINKNKEILYLVRYVSGDPNYLPISGLKKTKAKAFFNYLSKHVSNEMLKAEILQKNSKSKILAEKLFPGVT LLTLDNYNEHMNMKITSKITNTTGYVYADILGYLKTHAVNLVKKDLNDIVNILIIKGQWKDMEISRDVSNDIHDLVNIYS NLIDFDNSLGEQGNYGNRINALLHRVYVGGDKSSEKLLLNIIVDVNKKALILLNDYYSKIYSLKQLLSGCLEDYFKPSSE KELIYNWKELDLELVKSYGNNVNFGSIIKNIIEGLTLFLKLMDLYLTKKNGI
Sequences:
>Translated_532_residues MITLNFVFKRRAINVSLVDFLVAIFNRERTPEQVKQRRLKEVKKSLSKSSNFFSVSKIQALPQFAKFIYNLYKVFFPLKL FVQRYRNSNEIIHFVVEKYLNSTQKQALEHIYSFSANEIVNFTSDMLKNLDTNLNYLLKSITQEQVRLIDETCGALDIFF DLASYQYYILIKHFDSLFPEDDFIYKPRFSAVSCGVILDDIKDYLECIYSIKDISIWRNLYDILLKIYGDEDNFPMKPNV WLKMVTSIIEINKNKEILYLVRYVSGDPNYLPISGLKKTKAKAFFNYLSKHVSNEMLKAEILQKNSKSKILAEKLFPGVT LLTLDNYNEHMNMKITSKITNTTGYVYADILGYLKTHAVNLVKKDLNDIVNILIIKGQWKDMEISRDVSNDIHDLVNIYS NLIDFDNSLGEQGNYGNRINALLHRVYVGGDKSSEKLLLNIIVDVNKKALILLNDYYSKIYSLKQLLSGCLEDYFKPSSE KELIYNWKELDLELVKSYGNNVNFGSIIKNIIEGLTLFLKLMDLYLTKKNGI >Mature_532_residues MITLNFVFKRRAINVSLVDFLVAIFNRERTPEQVKQRRLKEVKKSLSKSSNFFSVSKIQALPQFAKFIYNLYKVFFPLKL FVQRYRNSNEIIHFVVEKYLNSTQKQALEHIYSFSANEIVNFTSDMLKNLDTNLNYLLKSITQEQVRLIDETCGALDIFF DLASYQYYILIKHFDSLFPEDDFIYKPRFSAVSCGVILDDIKDYLECIYSIKDISIWRNLYDILLKIYGDEDNFPMKPNV WLKMVTSIIEINKNKEILYLVRYVSGDPNYLPISGLKKTKAKAFFNYLSKHVSNEMLKAEILQKNSKSKILAEKLFPGVT LLTLDNYNEHMNMKITSKITNTTGYVYADILGYLKTHAVNLVKKDLNDIVNILIIKGQWKDMEISRDVSNDIHDLVNIYS NLIDFDNSLGEQGNYGNRINALLHRVYVGGDKSSEKLLLNIIVDVNKKALILLNDYYSKIYSLKQLLSGCLEDYFKPSSE KELIYNWKELDLELVKSYGNNVNFGSIIKNIIEGLTLFLKLMDLYLTKKNGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61901; Mature: 61901
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLNFVFKRRAINVSLVDFLVAIFNRERTPEQVKQRRLKEVKKSLSKSSNFFSVSKIQA CEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH LPQFAKFIYNLYKVFFPLKLFVQRYRNSNEIIHFVVEKYLNSTQKQALEHIYSFSANEIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHH NFTSDMLKNLDTNLNYLLKSITQEQVRLIDETCGALDIFFDLASYQYYILIKHFDSLFPE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEEHEEHHHHHCCC DDFIYKPRFSAVSCGVILDDIKDYLECIYSIKDISIWRNLYDILLKIYGDEDNFPMKPNV CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH WLKMVTSIIEINKNKEILYLVRYVSGDPNYLPISGLKKTKAKAFFNYLSKHVSNEMLKAE HHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILQKNSKSKILAEKLFPGVTLLTLDNYNEHMNMKITSKITNTTGYVYADILGYLKTHAVN HHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH LVKKDLNDIVNILIIKGQWKDMEISRDVSNDIHDLVNIYSNLIDFDNSLGEQGNYGNRIN HHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ALLHRVYVGGDKSSEKLLLNIIVDVNKKALILLNDYYSKIYSLKQLLSGCLEDYFKPSSE HHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC KELIYNWKELDLELVKSYGNNVNFGSIIKNIIEGLTLFLKLMDLYLTKKNGI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MITLNFVFKRRAINVSLVDFLVAIFNRERTPEQVKQRRLKEVKKSLSKSSNFFSVSKIQA CEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH LPQFAKFIYNLYKVFFPLKLFVQRYRNSNEIIHFVVEKYLNSTQKQALEHIYSFSANEIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHH NFTSDMLKNLDTNLNYLLKSITQEQVRLIDETCGALDIFFDLASYQYYILIKHFDSLFPE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEEHEEHHHHHCCC DDFIYKPRFSAVSCGVILDDIKDYLECIYSIKDISIWRNLYDILLKIYGDEDNFPMKPNV CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH WLKMVTSIIEINKNKEILYLVRYVSGDPNYLPISGLKKTKAKAFFNYLSKHVSNEMLKAE HHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILQKNSKSKILAEKLFPGVTLLTLDNYNEHMNMKITSKITNTTGYVYADILGYLKTHAVN HHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH LVKKDLNDIVNILIIKGQWKDMEISRDVSNDIHDLVNIYSNLIDFDNSLGEQGNYGNRIN HHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ALLHRVYVGGDKSSEKLLLNIIVDVNKKALILLNDYYSKIYSLKQLLSGCLEDYFKPSSE HHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC KELIYNWKELDLELVKSYGNNVNFGSIIKNIIEGLTLFLKLMDLYLTKKNGI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA