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The map label for this gene is tpn38b [H]

Identifier: 203284240

GI number: 203284240

Start: 340762

End: 341835

Strand: Reverse

Name: tpn38b [H]

Synonym: BDU_322

Alternate gene names: 203284240

Gene position: 341835-340762 (Counterclockwise)

Preceding gene: 203284241

Following gene: 203284239

Centisome position: 36.69

GC content: 27.47

Gene sequence:

>1074_bases
TTGTATTTTATGAGAAAAAGGTGTTTTGTATTTGTGAGTAAATCTTTTTTTTTTAGAATTTTTTGGATTGTTATTTCATT
AATTTGTTTGTTTTTATTTGTTTATATTAATTTTTTTAAGGCTAGAGGGCTTAAATTTTCATCTAATAGAAAAATTGCTT
TATTTATTCCTGGCAGTATTACTGGTTCGCCTTCTTATAAGGCAATGTATGATTGTTTAATTGAATTTCAAAATAGTAGA
AGTGATATTGATATTGAATTATTTGAATCTGGATTTAATCAGCATGAATGGATAGAATTACTCGAGAAATTATTAAATTC
CAAAAATTATGATTTTTTAATAACAACAAATAATGTCATGCAAGGCATTATAGATAAAGTTTCCAGGAATTATCCTTATA
CTAAATTTTTGCTTTTTGATTCTTTAGTTAAAAATACTAATCCCCAAGTATATTCTCTTTCTTATAACGTTGCCGAAGAA
GCTTATTTATTGGGTTATTATGTTGGTTTATTTTTAAAAGATTCAAATTTAGCAAATCAGAATGTTGCTTTGATTGCTGG
ACAAGAGTATCCTGTTATGAATAATTATATTTTTCCTTATTTTAAAAATGGTATTAAAGAGGTTTTAGATTCAGAGGTTT
TTTTTAGGACTTTAGGAAATTGGCATGACAGTAATAGAGTCAAAGTTTTGACCGAATCTTTGATTTTGGATTCAAAAGTA
TCTGTCATTCTTCCGATTGTAGGGGCAGCTATTAAGGGTGTTCTATCAGCAGTTCGTAAGCATGGTGTTTTTGTTGTTCT
TTTTGATGGTGAGGATTATTTGGATAATAAAGAGAATATTATTGGATCGGGTATTACAAATCAAAGATTATTCTTGGAAG
AGGTCTTAAGTAAAGCTATTAAGGATGAGATTCAGTATGGAACTTATAGGGTGCTTGGATTTAAAGATAAGGGGGTTTCA
TTTAATTTGTTAAATAAATTTTATCTAGAGAGTATAGGTTTGGATCTTAAAGAAAAGCTTGAGGAAAAAATGAGAGAGAT
GAATGATACTGAAATCAAAATAAATTTAGAATAA

Upstream 100 bases:

>100_bases
TATCTTTTTACAAAGAAACTTTTTATGAAAGTAATTGGTATATTGGTAGGTTTTAGGGTTTTGATTTTATGCCGTTTTGT
TCTCATAGTGTCAAAATTAG

Downstream 100 bases:

>100_bases
TTTATGGTAGAGTTTAAAAATATAGTAAAATATTTTCCAGATATTGAGAGACCTATCCTAAATAGTGTCAATTTAAGAAT
TGAGGAATCTAAAATTTTAA

Product: exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MYFMRKRCFVFVSKSFFFRIFWIVISLICLFLFVYINFFKARGLKFSSNRKIALFIPGSITGSPSYKAMYDCLIEFQNSR
SDIDIELFESGFNQHEWIELLEKLLNSKNYDFLITTNNVMQGIIDKVSRNYPYTKFLLFDSLVKNTNPQVYSLSYNVAEE
AYLLGYYVGLFLKDSNLANQNVALIAGQEYPVMNNYIFPYFKNGIKEVLDSEVFFRTLGNWHDSNRVKVLTESLILDSKV
SVILPIVGAAIKGVLSAVRKHGVFVVLFDGEDYLDNKENIIGSGITNQRLFLEEVLSKAIKDEIQYGTYRVLGFKDKGVS
FNLLNKFYLESIGLDLKEKLEEKMREMNDTEIKINLE

Sequences:

>Translated_357_residues
MYFMRKRCFVFVSKSFFFRIFWIVISLICLFLFVYINFFKARGLKFSSNRKIALFIPGSITGSPSYKAMYDCLIEFQNSR
SDIDIELFESGFNQHEWIELLEKLLNSKNYDFLITTNNVMQGIIDKVSRNYPYTKFLLFDSLVKNTNPQVYSLSYNVAEE
AYLLGYYVGLFLKDSNLANQNVALIAGQEYPVMNNYIFPYFKNGIKEVLDSEVFFRTLGNWHDSNRVKVLTESLILDSKV
SVILPIVGAAIKGVLSAVRKHGVFVVLFDGEDYLDNKENIIGSGITNQRLFLEEVLSKAIKDEIQYGTYRVLGFKDKGVS
FNLLNKFYLESIGLDLKEKLEEKMREMNDTEIKINLE
>Mature_357_residues
MYFMRKRCFVFVSKSFFFRIFWIVISLICLFLFVYINFFKARGLKFSSNRKIALFIPGSITGSPSYKAMYDCLIEFQNSR
SDIDIELFESGFNQHEWIELLEKLLNSKNYDFLITTNNVMQGIIDKVSRNYPYTKFLLFDSLVKNTNPQVYSLSYNVAEE
AYLLGYYVGLFLKDSNLANQNVALIAGQEYPVMNNYIFPYFKNGIKEVLDSEVFFRTLGNWHDSNRVKVLTESLILDSKV
SVILPIVGAAIKGVLSAVRKHGVFVVLFDGEDYLDNKENIIGSGITNQRLFLEEVLSKAIKDEIQYGTYRVLGFKDKGVS
FNLLNKFYLESIGLDLKEKLEEKMREMNDTEIKINLE

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 41372; Mature: 41372

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFMRKRCFVFVSKSFFFRIFWIVISLICLFLFVYINFFKARGLKFSSNRKIALFIPGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCC
TGSPSYKAMYDCLIEFQNSRSDIDIELFESGFNQHEWIELLEKLLNSKNYDFLITTNNVM
CCCCCHHHHHHHHHHHCCCCCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCEEEEECHHHH
QGIIDKVSRNYPYTKFLLFDSLVKNTNPQVYSLSYNVAEEAYLLGYYVGLFLKDSNLANQ
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHEEECCCCCCC
NVALIAGQEYPVMNNYIFPYFKNGIKEVLDSEVFFRTLGNWHDSNRVKVLTESLILDSKV
CEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCH
SVILPIVGAAIKGVLSAVRKHGVFVVLFDGEDYLDNKENIIGSGITNQRLFLEEVLSKAI
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCCEECCCCCCHHHHHHHHHHHHH
KDEIQYGTYRVLGFKDKGVSFNLLNKFYLESIGLDLKEKLEEKMREMNDTEIKINLE
HHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MYFMRKRCFVFVSKSFFFRIFWIVISLICLFLFVYINFFKARGLKFSSNRKIALFIPGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCC
TGSPSYKAMYDCLIEFQNSRSDIDIELFESGFNQHEWIELLEKLLNSKNYDFLITTNNVM
CCCCCHHHHHHHHHHHCCCCCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCEEEEECHHHH
QGIIDKVSRNYPYTKFLLFDSLVKNTNPQVYSLSYNVAEEAYLLGYYVGLFLKDSNLANQ
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHEEECCCCCCC
NVALIAGQEYPVMNNYIFPYFKNGIKEVLDSEVFFRTLGNWHDSNRVKVLTESLILDSKV
CEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCH
SVILPIVGAAIKGVLSAVRKHGVFVVLFDGEDYLDNKENIIGSGITNQRLFLEEVLSKAI
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCCEECCCCCCHHHHHHHHHHHHH
KDEIQYGTYRVLGFKDKGVSFNLLNKFYLESIGLDLKEKLEEKMREMNDTEIKINLE
HHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8598278; 9665876 [H]