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The map label for this gene is fliP [H]

Identifier: 203284196

GI number: 203284196

Start: 302398

End: 303162

Strand: Reverse

Name: fliP [H]

Synonym: BDU_278

Alternate gene names: 203284196

Gene position: 303162-302398 (Counterclockwise)

Preceding gene: 203284197

Following gene: 203284195

Centisome position: 32.54

GC content: 28.63

Gene sequence:

>765_bases
TTGAATAAAAAATTAAGTTTTTTGTTGTTATTTGGAGTTGTAAATTTTGCATTTGCTCAAACCAAGTCTTTGCAACCTAC
TACTGGATTGAATTTTCCATTTGTTGATTTTTTAAATTCTTTTGGTGGTGGCATAGTTTTTCCTCTGCAACTTTTATTAA
TATTAAGCATCATAACGCTTTCTCCAGCTTTTTTGGTTTTGATGACTTCCTTTTTAAGGATAGCAATAGTATTGGATTTT
ATTAGAAGAGCATTATCACTTCAGCAATCACCACCTAATCAGGTAATAATGGGATTAGCTTTATTTTTAACTCTTTTTAC
TATGTGGCCAACTTTTAACATAATATATAAAGATGCATATTTACCTTTGAGAGATTCTAAAATAAATTTTAATGAATTTT
ATGATAGAGGGATTGCTCCACTTAGAAATTTTATGTATAAACAGATGTCTAATAGTAGGCATGAGGAGATTAGATTGTTT
ATGAGTATTAGTGATTATGCAAAACCTAAAAACTTTAGTGAAGTTCCAACACATGTTCTTATTGCATCTTTTATTTTACA
TGAACTCAAAGTTGCTTTTAAAATGGGTATTTTGATCTTTTTACCATTTATAATAATAGATATTATTGTAGCTGCAGTTT
TAATGGCAATGGGTATGATAATGTTGCCACCTGTAATAATATCATTACCATTTAAGCTTATACTTTTTGTTATGGTGGAT
GGTTGGACTTTGATTACTAGTGGACTTATAAAAAGTTTTATGTGA

Upstream 100 bases:

>100_bases
ATTTATTAATGATCATGATGAATATGCGGAGTTGGAAAATGATATTGAGACTTCTTTGAAAAGTAAACAGGATAGATTAA
AAAAGTTTTAGAGGTTAAAT

Downstream 100 bases:

>100_bases
GGTCATAAGTGACAACTGGACAAATTATTTATTTGATTAAAATATCTATTGAAAATATTATTATTCTCTCAGCGCCAATG
TTAATTACAGCTCTTATAGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNKKLSFLLLFGVVNFAFAQTKSLQPTTGLNFPFVDFLNSFGGGIVFPLQLLLILSIITLSPAFLVLMTSFLRIAIVLDF
IRRALSLQQSPPNQVIMGLALFLTLFTMWPTFNIIYKDAYLPLRDSKINFNEFYDRGIAPLRNFMYKQMSNSRHEEIRLF
MSISDYAKPKNFSEVPTHVLIASFILHELKVAFKMGILIFLPFIIIDIIVAAVLMAMGMIMLPPVIISLPFKLILFVMVD
GWTLITSGLIKSFM

Sequences:

>Translated_254_residues
MNKKLSFLLLFGVVNFAFAQTKSLQPTTGLNFPFVDFLNSFGGGIVFPLQLLLILSIITLSPAFLVLMTSFLRIAIVLDF
IRRALSLQQSPPNQVIMGLALFLTLFTMWPTFNIIYKDAYLPLRDSKINFNEFYDRGIAPLRNFMYKQMSNSRHEEIRLF
MSISDYAKPKNFSEVPTHVLIASFILHELKVAFKMGILIFLPFIIIDIIVAAVLMAMGMIMLPPVIISLPFKLILFVMVD
GWTLITSGLIKSFM
>Mature_254_residues
MNKKLSFLLLFGVVNFAFAQTKSLQPTTGLNFPFVDFLNSFGGGIVFPLQLLLILSIITLSPAFLVLMTSFLRIAIVLDF
IRRALSLQQSPPNQVIMGLALFLTLFTMWPTFNIIYKDAYLPLRDSKINFNEFYDRGIAPLRNFMYKQMSNSRHEEIRLF
MSISDYAKPKNFSEVPTHVLIASFILHELKVAFKMGILIFLPFIIIDIIVAAVLMAMGMIMLPPVIISLPFKLILFVMVD
GWTLITSGLIKSFM

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=214, Percent_Identity=45.7943925233645, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28875; Mature: 28875

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHCC
>Mature Secondary Structure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CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]