| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284143
Identifier: 203284143
GI number: 203284143
Start: 239321
End: 240013
Strand: Reverse
Name: 203284143
Synonym: BDU_224
Alternate gene names: NA
Gene position: 240013-239321 (Counterclockwise)
Preceding gene: 203284145
Following gene: 203284142
Centisome position: 25.76
GC content: 28.72
Gene sequence:
>693_bases ATGTTTCTAGAAAAAATTTTAATTTCATTATCGTTTATACTAGTGCTATTAGCATCGTTTATTATATCTAGTGGTATAAA GGGTATTGGTGTAAAAAATGCAAATTACATTACTGTTAAAGGATTAAGTGAAAGAGAGGTTTTGTCAACTTTTTCAAGTT GGAGTTTAAATTACGAATTGGGTGGCAATAGTGTAGAAGAGATTAATAAATTAAATAATGCTAATTTATTGAGAATAAAG GATTTTTTTGTGAGTTATGGATTTCATGAAGATGAGATAGATATGCTTAATATGAGTCTTAATATTGCAAATTATCGTGA TACTCTTTACAAGTATAATGCTTACGTATCTTTAGGTGTTCGTACTGCAGATGTTGATAAAATGGAAAAAGCAAGTAAAA ATATCACTGAACTTTACAATAAGGGAGTACTTTTAAATAGTAATCTTGGTCCAAGGTATTATTTTGATAAGATTAATGAT GTTAAACCGGATATGTTAGCAGATTCTATTAAAAATGCTTATTCAGCAGCATTAGAGTTTGCACATCATTCAGGTGTTGC TTTGGGTAAAGTGAAAACAGCAAATCAAGGGTATTTTGAGTTTATTCCAATTGATAGAAGTGACGAAGATCATGCTCGTT ATTCAAAAAAGATATTAAGAGTAGTTACTACAGTTTCTTATTATTTAGATTGA
Upstream 100 bases:
>100_bases GTGCTATTGATATTTTTCTGTTTATTAACATAGCGTAATATGCTAAAATAAATTGTTTAATTTGACAATATTGTTTTATA AAAATTAAGAGGCAGGATGT
Downstream 100 bases:
>100_bases TTTATTCAAAGGAATAGTGATGGAATTTTTGTATTCTAATAAAGAGAGTGATTTAAAGAATAAGTTTTTTGAGTTTTTTT TAAATAATGTTAGTCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MFLEKILISLSFILVLLASFIISSGIKGIGVKNANYITVKGLSEREVLSTFSSWSLNYELGGNSVEEINKLNNANLLRIK DFFVSYGFHEDEIDMLNMSLNIANYRDTLYKYNAYVSLGVRTADVDKMEKASKNITELYNKGVLLNSNLGPRYYFDKIND VKPDMLADSIKNAYSAALEFAHHSGVALGKVKTANQGYFEFIPIDRSDEDHARYSKKILRVVTTVSYYLD
Sequences:
>Translated_230_residues MFLEKILISLSFILVLLASFIISSGIKGIGVKNANYITVKGLSEREVLSTFSSWSLNYELGGNSVEEINKLNNANLLRIK DFFVSYGFHEDEIDMLNMSLNIANYRDTLYKYNAYVSLGVRTADVDKMEKASKNITELYNKGVLLNSNLGPRYYFDKIND VKPDMLADSIKNAYSAALEFAHHSGVALGKVKTANQGYFEFIPIDRSDEDHARYSKKILRVVTTVSYYLD >Mature_230_residues MFLEKILISLSFILVLLASFIISSGIKGIGVKNANYITVKGLSEREVLSTFSSWSLNYELGGNSVEEINKLNNANLLRIK DFFVSYGFHEDEIDMLNMSLNIANYRDTLYKYNAYVSLGVRTADVDKMEKASKNITELYNKGVLLNSNLGPRYYFDKIND VKPDMLADSIKNAYSAALEFAHHSGVALGKVKTANQGYFEFIPIDRSDEDHARYSKKILRVVTTVSYYLD
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26007; Mature: 26007
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLEKILISLSFILVLLASFIISSGIKGIGVKNANYITVKGLSEREVLSTFSSWSLNYEL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCEEEEEE GGNSVEEINKLNNANLLRIKDFFVSYGFHEDEIDMLNMSLNIANYRDTLYKYNAYVSLGV CCCCHHHHHHCCCCCEEEEEHHHHHCCCCCCCCEEEEEEEEECHHHHHHHEEEEEEEEEE RTADVDKMEKASKNITELYNKGVLLNSNLGPRYYFDKINDVKPDMLADSIKNAYSAALEF EECCHHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH AHHSGVALGKVKTANQGYFEFIPIDRSDEDHARYSKKILRVVTTVSYYLD HHCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFLEKILISLSFILVLLASFIISSGIKGIGVKNANYITVKGLSEREVLSTFSSWSLNYEL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCEEEEEE GGNSVEEINKLNNANLLRIKDFFVSYGFHEDEIDMLNMSLNIANYRDTLYKYNAYVSLGV CCCCHHHHHHCCCCCEEEEEHHHHHCCCCCCCCEEEEEEEEECHHHHHHHEEEEEEEEEE RTADVDKMEKASKNITELYNKGVLLNSNLGPRYYFDKINDVKPDMLADSIKNAYSAALEF EECCHHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH AHHSGVALGKVKTANQGYFEFIPIDRSDEDHARYSKKILRVVTTVSYYLD HHCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA