| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is proX [H]
Identifier: 203284069
GI number: 203284069
Start: 156197
End: 157093
Strand: Reverse
Name: proX [H]
Synonym: BDU_147
Alternate gene names: 203284069
Gene position: 157093-156197 (Counterclockwise)
Preceding gene: 203284070
Following gene: 203284067
Centisome position: 16.86
GC content: 32.0
Gene sequence:
>897_bases ATGAAAGGTATTTTTATACCTGTTGTTGTAAGTTTTGTTTTAATTTTTGTGGCTTGCAGTAAAGATGATAGTTCTGATAA TGGTAATCCTAAAAGTTTAAAATCGGTTAAAATTGCTTATGTTAATTGGATAGGTGAAACAATTGCTACTAATATTGTAA GAGTTGTTTTTGAGAGAATTGGATATAATGTGGAAATATTGCCTGTGACTACGTCTATAATGTATCAGTATTTAGCATCT GGACGAGTGGATGGTATGGTATCTGCATGGGTGCCCACAGCAGATAAGTTTTATTATGAAAAATTTAAAGATAAATTTGT TGACCTTGGTGCTAATTATGAGGGTACATTACAAGGGTTTGTAGTTCCAAGTTATGTTACGATTTCAAGTATTTCAGAAC TTAAAGGTAGGGGTTCTGAATTTAAAAATAAAATGATAGGAATAGATGCAGGAGCAGGTACTCAGCTTTCTGTAGAGGAA ACTCTTAATCGTTATGGATTGAGTGAAGAATATGAGCTTATCTCTTCGAGTGAAAGTGTAATGCTTGCAAGTTTGGAATC CGCCATTAATAAACAAGAATGGATTTTGGTGCCTTTATGGCAACCTCATTGGGCATTTGTTAAGTATGATATTAAATTTT TAGATGATCCATTATTGTCAATGGGAGGTCCTGAGAGTATTCATTCTCTTGTTAAGCTAGGACTTCAAGAAAGTGATCCT GATGCTTATTATTTATTTGATAATTTTTACTGGGGTGATGATTTGTTATTGCCTTTGATAGAAAAAAATTATAAAGAGCC TGGCCAAGAATATAAAAATGCTGTTGAATTTGTTGATTCTCATAAGGACTACATAAAAAATTGGGTTCCAGATAAATATA AAAATTTATTTGATTAA
Upstream 100 bases:
>100_bases TGATAATTATGGGGGTAAAAAAGAAAATAAGTTCAAAAGGTTTTTAGAAATGTATAACAAATAATGCTTTGTTTGTATTT GTTAGAAGGGGGATTGGTTT
Downstream 100 bases:
>100_bases TCTTGTTTTAAATTCTTTTAATGAATTTAATATTGGATTTTTAGTTGGTAGTGATTCACAACCTCCTTTAAAGAGTGCAT TGCATCTAATTATTCTTAGT
Product: glycine betaine/L-proline transport system substrate-binding protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKGIFIPVVVSFVLIFVACSKDDSSDNGNPKSLKSVKIAYVNWIGETIATNIVRVVFERIGYNVEILPVTTSIMYQYLAS GRVDGMVSAWVPTADKFYYEKFKDKFVDLGANYEGTLQGFVVPSYVTISSISELKGRGSEFKNKMIGIDAGAGTQLSVEE TLNRYGLSEEYELISSSESVMLASLESAINKQEWILVPLWQPHWAFVKYDIKFLDDPLLSMGGPESIHSLVKLGLQESDP DAYYLFDNFYWGDDLLLPLIEKNYKEPGQEYKNAVEFVDSHKDYIKNWVPDKYKNLFD
Sequences:
>Translated_298_residues MKGIFIPVVVSFVLIFVACSKDDSSDNGNPKSLKSVKIAYVNWIGETIATNIVRVVFERIGYNVEILPVTTSIMYQYLAS GRVDGMVSAWVPTADKFYYEKFKDKFVDLGANYEGTLQGFVVPSYVTISSISELKGRGSEFKNKMIGIDAGAGTQLSVEE TLNRYGLSEEYELISSSESVMLASLESAINKQEWILVPLWQPHWAFVKYDIKFLDDPLLSMGGPESIHSLVKLGLQESDP DAYYLFDNFYWGDDLLLPLIEKNYKEPGQEYKNAVEFVDSHKDYIKNWVPDKYKNLFD >Mature_298_residues MKGIFIPVVVSFVLIFVACSKDDSSDNGNPKSLKSVKIAYVNWIGETIATNIVRVVFERIGYNVEILPVTTSIMYQYLAS GRVDGMVSAWVPTADKFYYEKFKDKFVDLGANYEGTLQGFVVPSYVTISSISELKGRGSEFKNKMIGIDAGAGTQLSVEE TLNRYGLSEEYELISSSESVMLASLESAINKQEWILVPLWQPHWAFVKYDIKFLDDPLLSMGGPESIHSLVKLGLQESDP DAYYLFDNFYWGDDLLLPLIEKNYKEPGQEYKNAVEFVDSHKDYIKNWVPDKYKNLFD
Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 33773; Mature: 33773
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIFIPVVVSFVLIFVACSKDDSSDNGNPKSLKSVKIAYVNWIGETIATNIVRVVFERI CCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHH GYNVEILPVTTSIMYQYLASGRVDGMVSAWVPTADKFYYEKFKDKFVDLGANYEGTLQGF CCCEEEEECHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE VVPSYVTISSISELKGRGSEFKNKMIGIDAGAGTQLSVEETLNRYGLSEEYELISSSESV EECCHHHHHHHHHHHCCCHHHHCCEEEEECCCCCEEEHHHHHHHCCCCHHHHHHCCCCHH MLASLESAINKQEWILVPLWQPHWAFVKYDIKFLDDPLLSMGGPESIHSLVKLGLQESDP HHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHHCCHHHHCCCHHHHHHHHHHCCCCCCC DAYYLFDNFYWGDDLLLPLIEKNYKEPGQEYKNAVEFVDSHKDYIKNWVPDKYKNLFD CEEEEECCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MKGIFIPVVVSFVLIFVACSKDDSSDNGNPKSLKSVKIAYVNWIGETIATNIVRVVFERI CCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHH GYNVEILPVTTSIMYQYLASGRVDGMVSAWVPTADKFYYEKFKDKFVDLGANYEGTLQGF CCCEEEEECHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE VVPSYVTISSISELKGRGSEFKNKMIGIDAGAGTQLSVEETLNRYGLSEEYELISSSESV EECCHHHHHHHHHHHCCCHHHHCCEEEEECCCCCEEEHHHHHHHCCCCHHHHHHCCCCHH MLASLESAINKQEWILVPLWQPHWAFVKYDIKFLDDPLLSMGGPESIHSLVKLGLQESDP HHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHHCCHHHHCCCHHHHHHHHHHCCCCCCC DAYYLFDNFYWGDDLLLPLIEKNYKEPGQEYKNAVEFVDSHKDYIKNWVPDKYKNLFD CEEEEECCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7622480; 8969502; 9384377 [H]